LmxM.30.1140 | monoglyceride lipase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      GO:0020015      

  • Curated_GO_Components:  cytoplasm      glycosome      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.30.1140OTHER0.9976460.0002720.002082
No Results

  • Fasta :-

    >LmxM.30.1140 MPCCCSGGHRLKYATPGRAPPDPQLFPHYMQNAQNLWLHFNEWWPHGDGGSCPTPPIKGV IFIVPGLGEHTGRYDSVALRLNQEGYVVFSMDNQGTGGSEGERLYVERFTHFVDDVCAFI LFIQTRYPALKSQPTFLMGHSMGGLIAVLVAERDASGFRGVVLSGPALGLSTPVPRFMRS LAGFLSKWFPKVPVRKLNPKLVSYNTPVVQLVQQDPFYSNAMLRARFVDEMLNAQDRAAE AASTAKFPFLIVHGEKDELCSLEMSKCFFENALSLDKHLASYHRAGHEVLTELCRDEVMA DVMKFINERAG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/424 Sequence name : 424 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 3.441 CoefTot : -3.224 ChDiff : -1 ZoneTo : 41 KR : 3 DE : 1 CleavSite : 20 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.894 1.682 0.212 0.672 MesoH : 0.121 0.676 -0.165 0.302 MuHd_075 : 31.238 16.732 7.605 5.907 MuHd_095 : 27.954 22.644 9.517 6.635 MuHd_100 : 29.472 21.858 9.247 7.052 MuHd_105 : 32.847 21.192 9.729 6.791 Hmax_075 : 6.400 4.200 -1.370 2.810 Hmax_095 : 16.400 12.800 1.106 6.290 Hmax_100 : 16.400 12.800 1.106 6.290 Hmax_105 : 11.550 4.988 0.303 4.037 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8409 0.1591 DFMC : 0.8184 0.1816
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 LmxM.30.1140 MPCCCSGGHRLKYATPGRAPPDPQLFPHYMQNAQNLWLHFNEWWPHGDGGSCPTPPIKGVIFIVPGLGEHTGRYDSVALR 80 LNQEGYVVFSMDNQGTGGSEGERLYVERFTHFVDDVCAFILFIQTRYPALKSQPTFLMGHSMGGLIAVLVAERDASGFRG 160 VVLSGPALGLSTPVPRFMRSLAGFLSKWFPKVPVRKLNPKLVSYNTPVVQLVQQDPFYSNAMLRARFVDEMLNAQDRAAE 240 AASTAKFPFLIVHGEKDELCSLEMSKCFFENALSLDKHLASYHRAGHEVLTELCRDEVMADVMKFINERAG 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.30.1140 10 CCSGGHR|LK 0.082 . LmxM.30.1140 12 SGGHRLK|YA 0.090 . LmxM.30.1140 18 KYATPGR|AP 0.079 . LmxM.30.1140 58 CPTPPIK|GV 0.087 . LmxM.30.1140 73 LGEHTGR|YD 0.125 . LmxM.30.1140 80 YDSVALR|LN 0.092 . LmxM.30.1140 103 GGSEGER|LY 0.086 . LmxM.30.1140 108 ERLYVER|FT 0.127 . LmxM.30.1140 126 ILFIQTR|YP 0.079 . LmxM.30.1140 131 TRYPALK|SQ 0.104 . LmxM.30.1140 153 AVLVAER|DA 0.106 . LmxM.30.1140 159 RDASGFR|GV 0.134 . LmxM.30.1140 176 LSTPVPR|FM 0.090 . LmxM.30.1140 179 PVPRFMR|SL 0.362 . LmxM.30.1140 187 LAGFLSK|WF 0.067 . LmxM.30.1140 191 LSKWFPK|VP 0.064 . LmxM.30.1140 195 FPKVPVR|KL 0.108 . LmxM.30.1140 196 PKVPVRK|LN 0.077 . LmxM.30.1140 200 VRKLNPK|LV 0.088 . LmxM.30.1140 224 YSNAMLR|AR 0.098 . LmxM.30.1140 226 NAMLRAR|FV 0.222 . LmxM.30.1140 237 MLNAQDR|AA 0.150 . LmxM.30.1140 246 EAASTAK|FP 0.075 . LmxM.30.1140 256 LIVHGEK|DE 0.068 . LmxM.30.1140 266 CSLEMSK|CF 0.059 . LmxM.30.1140 277 NALSLDK|HL 0.055 . LmxM.30.1140 284 HLASYHR|AG 0.110 . LmxM.30.1140 295 VLTELCR|DE 0.081 . LmxM.30.1140 304 VMADVMK|FI 0.069 . LmxM.30.1140 309 MKFINER|AG 0.085 . ____________________________^_________________

  • Fasta :-

    >LmxM.30.1140 ATGCCGTGCTGCTGCTCTGGCGGTCACCGCCTCAAGTACGCCACCCCAGGTCGGGCACCA CCCGACCCACAACTCTTTCCTCACTACATGCAAAATGCGCAGAACCTGTGGTTGCACTTC AACGAGTGGTGGCCGCATGGTGACGGTGGCAGCTGCCCGACCCCGCCAATTAAAGGCGTC ATTTTTATCGTGCCTGGCTTGGGCGAGCACACCGGCCGCTACGACTCCGTCGCGCTCCGA CTCAACCAGGAGGGCTACGTTGTCTTTTCTATGGACAATCAAGGCACTGGTGGGAGCGAA GGGGAGCGGCTATACGTTGAGCGCTTCACGCACTTCGTCGACGACGTCTGCGCGTTCATT CTGTTCATTCAGACACGGTACCCGGCCCTCAAGAGCCAGCCAACCTTTCTTATGGGGCAC TCGATGGGGGGGCTCATTGCCGTTCTGGTGGCGGAGAGGGATGCAAGCGGCTTCCGCGGG GTCGTCCTGAGCGGCCCAGCTCTGGGGCTGTCGACGCCCGTCCCCCGTTTTATGCGGTCG CTCGCGGGCTTTCTCTCAAAGTGGTTCCCGAAGGTGCCGGTGCGCAAGCTCAACCCCAAA CTCGTCAGCTACAACACGCCTGTCGTGCAACTTGTGCAGCAGGACCCATTTTACTCCAAC GCGATGCTTCGCGCGCGCTTCGTCGATGAGATGCTGAATGCGCAGGATCGCGCCGCCGAA GCCGCGTCAACGGCAAAGTTTCCTTTTCTTATCGTCCACGGTGAGAAGGACGAGCTCTGC TCGTTAGAGATGTCGAAGTGTTTCTTCGAGAACGCGCTGTCACTGGACAAGCATCTGGCC TCCTACCACCGTGCCGGGCACGAAGTACTGACGGAGCTGTGCCGAGATGAGGTGATGGCA GACGTGATGAAGTTCATCAACGAGCGGGCGGGGTGA
  • Download Fasta

  • Fasta :-

    MPCCCSGGHRLKYATPGRAPPDPQLFPHYMQNAQNLWLHFNEWWPHGDGGSCPTPPIKGV IFIVPGLGEHTGRYDSVALRLNQEGYVVFSMDNQGTGGSEGERLYVERFTHFVDDVCAFI LFIQTRYPALKSQPTFLMGHSMGGLIAVLVAERDASGFRGVVLSGPALGLSTPVPRFMRS LAGFLSKWFPKVPVRKLNPKLVSYNTPVVQLVQQDPFYSNAMLRARFVDEMLNAQDRAAE AASTAKFPFLIVHGEKDELCSLEMSKCFFENALSLDKHLASYHRAGHEVLTELCRDEVMA DVMKFINERAG

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
LmxM.30.1140156 SERDASGFRG0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India