LmxM.32.1610 | cytosolic nonspecific dipeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.32.1610OTHER0.9992470.0007400.000012
No Results

  • Fasta :-

    >LmxM.32.1610 MSDCVWTVIQKAVEAEWDASIIPALSAYIEVPNQSPDFDPQWATNGLIKKAFTILINWMK GQNLLGLSYEFMEVEGRTPFLLVEIAGTEPTKNTLLMYGHMDKQPPLHPWDEGLDPHKAV LRDGKLYGRGGADDGYALFSAITSVSVLQRHGIPHGRVIVVIEACEESGSFDLDYYMERC KERIGNVDLMVCLDSGCLNYSQVWLTTSLRGVTGGLLNVQTLTESMHSGVAGGVVPDTFR IACELLGRVEDSKTGKVLFPEAYCEIPDYVVKSMESMKIVPFKDQFAMADGVSTESGDNV ELALRNFWKPSLTVTGANLPEPQIAGNVIRTHTSLKLSLRVPPLVDAEKATQAMAKVLVA NPPYGAKVWFEPEVPGNGCATPELKPWLLTALNEGSKMAYGNPLAFQGMGGAIPFISMLI KAYPQAQFVVTGVLGPKSNAHGPNEFLHIKYAKSLTFVISHVVAEHFRHTPK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/828 Sequence name : 828 Sequence length : 472 VALUES OF COMPUTED PARAMETERS Coef20 : 4.017 CoefTot : 0.112 ChDiff : -11 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.859 1.588 0.230 0.697 MesoH : 0.146 0.445 -0.229 0.333 MuHd_075 : 2.916 12.797 5.279 2.173 MuHd_095 : 37.429 28.029 11.065 7.721 MuHd_100 : 32.710 25.466 9.799 6.642 MuHd_105 : 21.213 19.359 6.870 4.770 Hmax_075 : 1.300 9.800 -0.573 2.900 Hmax_095 : 10.500 17.325 2.538 5.276 Hmax_100 : 6.700 14.900 1.476 4.740 Hmax_105 : 15.500 17.600 2.964 5.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7113 0.2887 DFMC : 0.9108 0.0892
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 472 LmxM.32.1610 MSDCVWTVIQKAVEAEWDASIIPALSAYIEVPNQSPDFDPQWATNGLIKKAFTILINWMKGQNLLGLSYEFMEVEGRTPF 80 LLVEIAGTEPTKNTLLMYGHMDKQPPLHPWDEGLDPHKAVLRDGKLYGRGGADDGYALFSAITSVSVLQRHGIPHGRVIV 160 VIEACEESGSFDLDYYMERCKERIGNVDLMVCLDSGCLNYSQVWLTTSLRGVTGGLLNVQTLTESMHSGVAGGVVPDTFR 240 IACELLGRVEDSKTGKVLFPEAYCEIPDYVVKSMESMKIVPFKDQFAMADGVSTESGDNVELALRNFWKPSLTVTGANLP 320 EPQIAGNVIRTHTSLKLSLRVPPLVDAEKATQAMAKVLVANPPYGAKVWFEPEVPGNGCATPELKPWLLTALNEGSKMAY 400 GNPLAFQGMGGAIPFISMLIKAYPQAQFVVTGVLGPKSNAHGPNEFLHIKYAKSLTFVISHVVAEHFRHTPK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.32.1610 11 VWTVIQK|AV 0.079 . LmxM.32.1610 49 ATNGLIK|KA 0.081 . LmxM.32.1610 50 TNGLIKK|AF 0.121 . LmxM.32.1610 60 ILINWMK|GQ 0.065 . LmxM.32.1610 77 FMEVEGR|TP 0.068 . LmxM.32.1610 92 AGTEPTK|NT 0.062 . LmxM.32.1610 103 MYGHMDK|QP 0.057 . LmxM.32.1610 118 EGLDPHK|AV 0.066 . LmxM.32.1610 122 PHKAVLR|DG 0.090 . LmxM.32.1610 125 AVLRDGK|LY 0.145 . LmxM.32.1610 129 DGKLYGR|GG 0.075 . LmxM.32.1610 150 SVSVLQR|HG 0.123 . LmxM.32.1610 157 HGIPHGR|VI 0.108 . LmxM.32.1610 179 LDYYMER|CK 0.093 . LmxM.32.1610 181 YYMERCK|ER 0.057 . LmxM.32.1610 183 MERCKER|IG 0.099 . LmxM.32.1610 210 WLTTSLR|GV 0.134 . LmxM.32.1610 240 VVPDTFR|IA 0.088 . LmxM.32.1610 248 ACELLGR|VE 0.072 . LmxM.32.1610 253 GRVEDSK|TG 0.061 . LmxM.32.1610 256 EDSKTGK|VL 0.078 . LmxM.32.1610 272 IPDYVVK|SM 0.079 . LmxM.32.1610 278 KSMESMK|IV 0.077 . LmxM.32.1610 283 MKIVPFK|DQ 0.108 . LmxM.32.1610 305 NVELALR|NF 0.062 . LmxM.32.1610 309 ALRNFWK|PS 0.074 . LmxM.32.1610 330 IAGNVIR|TH 0.090 . LmxM.32.1610 336 RTHTSLK|LS 0.062 . LmxM.32.1610 340 SLKLSLR|VP 0.070 . LmxM.32.1610 349 PLVDAEK|AT 0.065 . LmxM.32.1610 356 ATQAMAK|VL 0.071 . LmxM.32.1610 367 NPPYGAK|VW 0.061 . LmxM.32.1610 385 CATPELK|PW 0.052 . LmxM.32.1610 397 ALNEGSK|MA 0.067 . LmxM.32.1610 421 FISMLIK|AY 0.084 . LmxM.32.1610 437 TGVLGPK|SN 0.081 . LmxM.32.1610 450 NEFLHIK|YA 0.066 . LmxM.32.1610 453 LHIKYAK|SL 0.109 . LmxM.32.1610 468 VVAEHFR|HT 0.103 . LmxM.32.1610 472 HFRHTPK|-- 0.074 . ____________________________^_________________

  • Fasta :-

    >LmxM.32.1610 ATGAGCGATTGTGTCTGGACTGTGATTCAAAAGGCCGTGGAGGCCGAGTGGGATGCCTCC ATCATTCCTGCGCTGTCCGCCTACATTGAAGTGCCGAACCAGAGCCCCGACTTTGACCCC CAGTGGGCGACGAACGGACTCATAAAGAAGGCCTTTACCATACTGATCAACTGGATGAAG GGGCAGAATCTCCTGGGCCTCAGCTACGAGTTCATGGAGGTCGAGGGAAGGACCCCGTTC CTTCTCGTCGAGATCGCTGGGACGGAGCCGACGAAGAACACCTTGCTCATGTACGGCCAC ATGGATAAACAGCCGCCTCTCCACCCGTGGGACGAAGGCCTTGACCCCCACAAGGCAGTC TTGCGGGATGGCAAGCTGTACGGCCGCGGCGGCGCTGACGACGGGTACGCGCTTTTTTCG GCCATCACGTCTGTCTCGGTACTCCAGCGCCACGGCATTCCGCACGGTCGAGTGATCGTA GTCATTGAGGCGTGCGAAGAGTCTGGCAGCTTCGACCTGGACTACTACATGGAGCGCTGC AAGGAGCGCATCGGCAACGTGGATTTGATGGTGTGCCTAGACAGCGGCTGTCTCAACTAC TCGCAGGTATGGCTCACGACGTCGTTGCGTGGTGTGACGGGTGGGTTGCTGAACGTGCAG ACACTGACGGAAAGCATGCACAGTGGCGTCGCCGGCGGCGTCGTGCCGGACACGTTCCGC ATTGCATGTGAGCTGCTGGGCCGCGTCGAGGATTCAAAGACCGGAAAGGTGCTGTTCCCT GAGGCCTACTGCGAGATTCCAGACTACGTTGTCAAGTCCATGGAGTCGATGAAGATCGTG CCGTTCAAGGACCAGTTTGCCATGGCCGACGGCGTGTCGACAGAGTCGGGAGACAATGTG GAGCTGGCGCTGCGGAACTTCTGGAAGCCGAGTCTCACTGTGACAGGGGCCAACCTGCCG GAGCCACAGATAGCCGGCAACGTCATCCGCACCCACACCTCGCTGAAGCTGTCCCTCCGC GTCCCGCCCCTGGTGGACGCGGAGAAGGCCACCCAGGCCATGGCCAAGGTGCTTGTGGCC AACCCGCCGTACGGCGCTAAGGTGTGGTTTGAGCCCGAGGTTCCCGGCAATGGCTGCGCG ACCCCAGAGCTGAAGCCGTGGCTCCTGACCGCGCTCAACGAGGGCAGCAAGATGGCGTAC GGCAACCCGCTCGCATTCCAGGGCATGGGCGGCGCGATCCCATTCATCTCCATGCTCATT AAAGCGTACCCGCAAGCGCAGTTCGTTGTCACCGGCGTCCTTGGTCCAAAGAGCAACGCG CACGGCCCCAATGAGTTTCTGCACATCAAGTACGCTAAAAGCCTCACGTTTGTCATCAGC CACGTTGTCGCTGAGCACTTTCGCCACACTCCCAAGTAA
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  • Fasta :-

    MSDCVWTVIQKAVEAEWDASIIPALSAYIEVPNQSPDFDPQWATNGLIKKAFTILINWMK GQNLLGLSYEFMEVEGRTPFLLVEIAGTEPTKNTLLMYGHMDKQPPLHPWDEGLDPHKAV LRDGKLYGRGGADDGYALFSAITSVSVLQRHGIPHGRVIVVIEACEESGSFDLDYYMERC KERIGNVDLMVCLDSGCLNYSQVWLTTSLRGVTGGLLNVQTLTESMHSGVAGGVVPDTFR IACELLGRVEDSKTGKVLFPEAYCEIPDYVVKSMESMKIVPFKDQFAMADGVSTESGDNV ELALRNFWKPSLTVTGANLPEPQIAGNVIRTHTSLKLSLRVPPLVDAEKATQAMAKVLVA NPPYGAKVWFEPEVPGNGCATPELKPWLLTALNEGSKMAYGNPLAFQGMGGAIPFISMLI KAYPQAQFVVTGVLGPKSNAHGPNEFLHIKYAKSLTFVISHVVAEHFRHTPK

  • title: metal binding site
  • coordinates: H100,D133,E166,E167,D194,H441
No Results
No Results
IDSitePeptideScoreMethod
LmxM.32.1610293 SADGVSTESG0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India