LmxM.32.2830 | cysteine peptidase, Clan CA, family C51, putative

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_IDPredictionOTHERSPmTPCS_Position
LmxM.32.2830OTHER0.9663860.0246810.008933
No Results

  • Fasta :-

    >LmxM.32.2830 MLYSSIRYGGNCTGTNGTSGGSVKPREPCATPFGSILGVFNGVFGYSNCNDSYVSTELGY INLMVPELNKETRQLTYISKEFSTGLAWQCVEYARRYWMQSGTPQPAYFEYVQGAADIWN LTFVRLLSNQSMTLPLHRYRNGDRVANGLQIPAVGDIIIYPVQDRGFPYGHVAVIAKVEI STQGAIYVAEQNWANTVWSSAYHNYTRKIPLFYNMLSSTITLDDPDGKILGWMRYG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/435 Sequence name : 435 Sequence length : 236 VALUES OF COMPUTED PARAMETERS Coef20 : 3.511 CoefTot : -3.419 ChDiff : 1 ZoneTo : 50 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.565 1.271 0.258 0.602 MesoH : -0.352 0.193 -0.308 0.240 MuHd_075 : 24.834 15.150 8.531 5.167 MuHd_095 : 22.101 17.335 6.173 5.670 MuHd_100 : 21.867 23.869 7.413 5.457 MuHd_105 : 21.417 24.718 7.748 5.414 Hmax_075 : 15.050 15.050 4.661 5.425 Hmax_095 : 12.338 15.700 1.268 3.780 Hmax_100 : 21.600 23.400 5.402 7.490 Hmax_105 : 5.717 24.500 2.890 7.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9698 0.0302 DFMC : 0.9537 0.0463
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 236 LmxM.32.2830 MLYSSIRYGGNCTGTNGTSGGSVKPREPCATPFGSILGVFNGVFGYSNCNDSYVSTELGYINLMVPELNKETRQLTYISK 80 EFSTGLAWQCVEYARRYWMQSGTPQPAYFEYVQGAADIWNLTFVRLLSNQSMTLPLHRYRNGDRVANGLQIPAVGDIIIY 160 PVQDRGFPYGHVAVIAKVEISTQGAIYVAEQNWANTVWSSAYHNYTRKIPLFYNMLSSTITLDDPDGKILGWMRYG 240 ................................................................................ 80 ................................................................................ 160 ............................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.32.2830 7 MLYSSIR|YG 0.109 . LmxM.32.2830 24 TSGGSVK|PR 0.073 . LmxM.32.2830 26 GGSVKPR|EP 0.155 . LmxM.32.2830 70 MVPELNK|ET 0.057 . LmxM.32.2830 73 ELNKETR|QL 0.113 . LmxM.32.2830 80 QLTYISK|EF 0.074 . LmxM.32.2830 95 QCVEYAR|RY 0.084 . LmxM.32.2830 96 CVEYARR|YW 0.183 . LmxM.32.2830 125 WNLTFVR|LL 0.086 . LmxM.32.2830 138 MTLPLHR|YR 0.079 . LmxM.32.2830 140 LPLHRYR|NG 0.096 . LmxM.32.2830 144 RYRNGDR|VA 0.084 . LmxM.32.2830 165 IYPVQDR|GF 0.086 . LmxM.32.2830 177 HVAVIAK|VE 0.063 . LmxM.32.2830 207 AYHNYTR|KI 0.082 . LmxM.32.2830 208 YHNYTRK|IP 0.070 . LmxM.32.2830 228 LDDPDGK|IL 0.073 . LmxM.32.2830 234 KILGWMR|YG 0.085 . ____________________________^_________________

  • Fasta :-

    >LmxM.32.2830 ATGTTATACAGCTCCATCCGCTACGGCGGGAACTGCACCGGCACCAATGGGACCTCAGGT GGGTCAGTGAAGCCACGCGAACCGTGCGCCACACCCTTCGGCTCCATCCTCGGCGTCTTC AACGGCGTCTTTGGCTACAGCAACTGCAATGACAGCTACGTGTCCACCGAGCTGGGGTAC ATTAACCTGATGGTGCCGGAGCTGAACAAGGAGACGAGGCAGCTAACCTACATCTCCAAG GAGTTCTCCACGGGGCTGGCATGGCAGTGCGTAGAGTACGCGCGGCGATACTGGATGCAG AGCGGAACGCCGCAGCCCGCGTACTTTGAATACGTTCAAGGAGCCGCAGACATTTGGAAC CTGACCTTTGTGAGGCTCCTGTCGAACCAATCCATGACGCTGCCCCTGCACAGGTACAGG AACGGCGATCGCGTGGCGAACGGCCTCCAGATCCCCGCAGTCGGTGACATCATCATCTAC CCCGTCCAAGATCGCGGCTTTCCCTACGGCCACGTTGCCGTCATCGCGAAGGTGGAAATA TCGACTCAAGGCGCCATCTATGTGGCGGAACAAAATTGGGCTAACACCGTGTGGTCATCG GCGTACCACAACTACACCCGAAAGATTCCTTTGTTCTATAACATGCTGTCCTCCACTATC ACCCTTGATGATCCAGACGGTAAAATCCTGGGGTGGATGCGGTACGGCTGA
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  • Fasta :-

    MLYSSIRYGGNCTGTNGTSGGSVKPREPCATPFGSILGVFNGVFGYSNCNDSYVSTELGY INLMVPELNKETRQLTYISKEFSTGLAWQCVEYARRYWMQSGTPQPAYFEYVQGAADIWN LTFVRLLSNQSMTLPLHRYRNGDRVANGLQIPAVGDIIIYPVQDRGFPYGHVAVIAKVEI STQGAIYVAEQNWANTVWSSAYHNYTRKIPLFYNMLSSTITLDDPDGKILGWMRYG

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India