LmxM.32.2850 | cysteine peptidase, Clan CA, family C51, putative

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_IDPredictionOTHERSPmTPCS_Position
LmxM.32.2850OTHER0.9966500.0021530.001197
No Results

  • Fasta :-

    >LmxM.32.2850 MRSRRPPSGGIQGRADVAAATVLRPSSSSSSAPASSSLLQDEVLPRSRKESGPSNAAICD AYAMKLLHEATEVERCRGPHWRARCSPSILVALLIWATIGLVVYMKLDSSHLRPGAAPAT TSVETPLSQLPESCRGHHCLQKGGREPFGAVLGAHDGVFAYSNCNSDTCISSIQYQMAIP LPPGARTALDAPHATTRFMKTGMKWQCVEYARRYWMLRGKPAPAFFGAVNGAADIWDSLT HVTFLDNATTAPLLKFKNGASLGYGGGAPHVGDLLIYPRDSAGIFPYGHVSVVVEVEMTT KVKADDSYMAATAASPKPRQRHGLVYVAEQNWDSVTWPDPYHNYSRSLPLVVLESAEGRP LQYTIEDSFHGIQGWVRYDGEAYG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/186 Sequence name : 186 Sequence length : 384 VALUES OF COMPUTED PARAMETERS Coef20 : 4.042 CoefTot : 0.809 ChDiff : 3 ZoneTo : 40 KR : 5 DE : 1 CleavSite : 26 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.559 0.415 0.899 MesoH : -0.114 0.356 -0.272 0.316 MuHd_075 : 21.077 15.579 5.208 4.977 MuHd_095 : 21.602 15.500 5.044 4.449 MuHd_100 : 19.119 11.937 5.103 4.657 MuHd_105 : 19.912 12.029 4.581 5.289 Hmax_075 : 12.600 14.200 2.769 2.730 Hmax_095 : 11.400 17.100 2.518 4.463 Hmax_100 : -3.600 11.700 -1.200 2.900 Hmax_105 : 9.100 1.800 0.023 3.383 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8381 0.1619 DFMC : 0.8938 0.1062
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 384 LmxM.32.2850 MRSRRPPSGGIQGRADVAAATVLRPSSSSSSAPASSSLLQDEVLPRSRKESGPSNAAICDAYAMKLLHEATEVERCRGPH 80 WRARCSPSILVALLIWATIGLVVYMKLDSSHLRPGAAPATTSVETPLSQLPESCRGHHCLQKGGREPFGAVLGAHDGVFA 160 YSNCNSDTCISSIQYQMAIPLPPGARTALDAPHATTRFMKTGMKWQCVEYARRYWMLRGKPAPAFFGAVNGAADIWDSLT 240 HVTFLDNATTAPLLKFKNGASLGYGGGAPHVGDLLIYPRDSAGIFPYGHVSVVVEVEMTTKVKADDSYMAATAASPKPRQ 320 RHGLVYVAEQNWDSVTWPDPYHNYSRSLPLVVLESAEGRPLQYTIEDSFHGIQGWVRYDGEAYG 400 ....P........................................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmxM.32.2850 2 -----MR|SR 0.106 . LmxM.32.2850 4 ---MRSR|RP 0.078 . LmxM.32.2850 5 --MRSRR|PP 0.642 *ProP* LmxM.32.2850 14 SGGIQGR|AD 0.108 . LmxM.32.2850 24 AAATVLR|PS 0.087 . LmxM.32.2850 46 QDEVLPR|SR 0.135 . LmxM.32.2850 48 EVLPRSR|KE 0.065 . LmxM.32.2850 49 VLPRSRK|ES 0.310 . LmxM.32.2850 65 CDAYAMK|LL 0.071 . LmxM.32.2850 75 EATEVER|CR 0.083 . LmxM.32.2850 77 TEVERCR|GP 0.092 . LmxM.32.2850 82 CRGPHWR|AR 0.090 . LmxM.32.2850 84 GPHWRAR|CS 0.152 . LmxM.32.2850 106 GLVVYMK|LD 0.067 . LmxM.32.2850 113 LDSSHLR|PG 0.099 . LmxM.32.2850 135 QLPESCR|GH 0.090 . LmxM.32.2850 142 GHHCLQK|GG 0.066 . LmxM.32.2850 145 CLQKGGR|EP 0.091 . LmxM.32.2850 186 PLPPGAR|TA 0.105 . LmxM.32.2850 197 APHATTR|FM 0.147 . LmxM.32.2850 200 ATTRFMK|TG 0.144 . LmxM.32.2850 204 FMKTGMK|WQ 0.056 . LmxM.32.2850 212 QCVEYAR|RY 0.077 . LmxM.32.2850 213 CVEYARR|YW 0.107 . LmxM.32.2850 218 RRYWMLR|GK 0.089 . LmxM.32.2850 220 YWMLRGK|PA 0.070 . LmxM.32.2850 255 TTAPLLK|FK 0.065 . LmxM.32.2850 257 APLLKFK|NG 0.061 . LmxM.32.2850 279 DLLIYPR|DS 0.102 . LmxM.32.2850 301 EVEMTTK|VK 0.055 . LmxM.32.2850 303 EMTTKVK|AD 0.064 . LmxM.32.2850 317 ATAASPK|PR 0.064 . LmxM.32.2850 319 AASPKPR|QR 0.134 . LmxM.32.2850 321 SPKPRQR|HG 0.090 . LmxM.32.2850 346 PYHNYSR|SL 0.113 . LmxM.32.2850 359 LESAEGR|PL 0.104 . LmxM.32.2850 377 GIQGWVR|YD 0.112 . ____________________________^_________________

  • Fasta :-

    >LmxM.32.2850 ATGCGTAGCCGCCGGCCGCCATCGGGCGGCATCCAAGGTCGTGCCGACGTCGCCGCTGCC ACCGTTCTTCGCCCTTCGTCGTCATCTTCGTCAGCGCCGGCGTCGTCGTCGTTGCTGCAG GACGAGGTCTTACCCCGCTCGCGAAAGGAGTCGGGCCCAAGCAATGCAGCGATATGCGAT GCGTACGCGATGAAGCTTCTACACGAAGCGACGGAGGTGGAGCGGTGCCGCGGACCACAC TGGCGTGCGCGCTGCTCCCCCAGCATCCTCGTTGCCCTGCTCATCTGGGCGACGATCGGC CTTGTCGTGTACATGAAACTGGATAGCTCCCATTTGCGTCCCGGTGCCGCGCCCGCGACC ACTTCTGTTGAGACCCCGCTGTCGCAACTCCCTGAAAGCTGTCGTGGCCATCACTGTCTG CAGAAAGGCGGAAGGGAGCCCTTTGGAGCGGTCCTCGGAGCCCACGATGGTGTTTTCGCA TATAGCAACTGCAACAGTGACACCTGCATCTCTTCCATACAGTACCAGATGGCGATTCCG CTCCCACCAGGGGCGCGGACGGCTCTGGATGCCCCACACGCGACGACTCGCTTCATGAAA ACAGGGATGAAGTGGCAGTGCGTCGAATACGCCCGGCGGTACTGGATGCTGCGCGGCAAG CCAGCCCCCGCGTTCTTCGGCGCTGTGAATGGCGCCGCAGATATTTGGGACTCTCTCACC CACGTTACCTTCCTCGACAACGCCACGACGGCTCCGCTGCTAAAGTTTAAGAATGGCGCG AGCCTCGGTTACGGCGGCGGCGCACCCCACGTCGGAGACTTGCTCATCTACCCTCGCGAT AGCGCGGGCATTTTCCCCTACGGCCATGTCTCCGTGGTGGTCGAGGTGGAGATGACCACG AAGGTCAAGGCGGACGACTCTTACATGGCGGCCACAGCCGCATCGCCTAAGCCGCGTCAG CGGCATGGACTTGTGTACGTTGCGGAGCAAAACTGGGACAGCGTGACGTGGCCGGATCCA TACCACAACTACTCACGTTCACTGCCGCTGGTGGTGCTTGAATCAGCGGAGGGGCGGCCG CTGCAGTACACGATCGAGGATTCGTTCCATGGCATCCAGGGCTGGGTGCGTTACGATGGC GAGGCGTATGGTTGA
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  • Fasta :-

    MRSRRPPSGGIQGRADVAAATVLRPSSSSSSAPASSSLLQDEVLPRSRKESGPSNAAICD AYAMKLLHEATEVERCRGPHWRARCSPSILVALLIWATIGLVVYMKLDSSHLRPGAAPAT TSVETPLSQLPESCRGHHCLQKGGREPFGAVLGAHDGVFAYSNCNSDTCISSIQYQMAIP LPPGARTALDAPHATTRFMKTGMKWQCVEYARRYWMLRGKPAPAFFGAVNGAADIWDSLT HVTFLDNATTAPLLKFKNGASLGYGGGAPHVGDLLIYPRDSAGIFPYGHVSVVVEVEMTT KVKADDSYMAATAASPKPRQRHGLVYVAEQNWDSVTWPDPYHNYSRSLPLVVLESAEGRP LQYTIEDSFHGIQGWVRYDGEAYG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.32.285051 SSRKESGPSN0.994unspLmxM.32.285051 SSRKESGPSN0.994unspLmxM.32.285051 SSRKESGPSN0.994unspLmxM.32.285026 SVLRPSSSSS0.995unspLmxM.32.285047 SVLPRSRKES0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India