LmxM.33.2000 | pyroglutamyl-peptidase I, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:  GO:0016920      

  • Curated_GO_Functions:  pyroglutamyl-peptidase activity      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.33.2000OTHER0.8418090.1359760.022215
No Results

  • Fasta :-

    >LmxM.33.2000 MLHSKAGIVVFITGYGPFATVKVNPSSDIALRVVEDLKRHPDVAEVRYTELDVSVTAVAA YFERVEREIAEIIAEHGAVKVKILLCHLGVHNDTTGLIRVEVQGYNELFANVPDVDGKVL NHEPIAPEDGPIEVFHESWFGKEGSPQFEKLESLIQEVNDTIAESWHHSRTGAVTNNEMT SVEPNRKDMMMPAFQAPSWAISRDAGRYLCNCALYRALRLQERNPGVVYGIFIHVVDPIR GKTEIEGGPIVAYNPTTMVQSVQVKCLMNGLLSLMTS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/231 Sequence name : 231 Sequence length : 277 VALUES OF COMPUTED PARAMETERS Coef20 : 3.715 CoefTot : -1.272 ChDiff : -11 ZoneTo : 27 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.253 1.400 0.143 0.614 MesoH : -0.729 0.339 -0.355 0.192 MuHd_075 : 11.055 6.707 3.733 3.053 MuHd_095 : 10.168 7.712 3.399 2.653 MuHd_100 : 11.474 8.771 3.132 2.674 MuHd_105 : 15.924 10.665 4.684 2.255 Hmax_075 : 14.233 13.300 2.954 5.400 Hmax_095 : 16.200 16.100 3.728 4.953 Hmax_100 : 14.400 18.100 2.165 5.900 Hmax_105 : 17.617 13.600 3.344 6.837 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9569 0.0431 DFMC : 0.9373 0.0627
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 277 LmxM.33.2000 MLHSKAGIVVFITGYGPFATVKVNPSSDIALRVVEDLKRHPDVAEVRYTELDVSVTAVAAYFERVEREIAEIIAEHGAVK 80 VKILLCHLGVHNDTTGLIRVEVQGYNELFANVPDVDGKVLNHEPIAPEDGPIEVFHESWFGKEGSPQFEKLESLIQEVND 160 TIAESWHHSRTGAVTNNEMTSVEPNRKDMMMPAFQAPSWAISRDAGRYLCNCALYRALRLQERNPGVVYGIFIHVVDPIR 240 GKTEIEGGPIVAYNPTTMVQSVQVKCLMNGLLSLMTS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.33.2000 5 --MLHSK|AG 0.067 . LmxM.33.2000 22 GPFATVK|VN 0.060 . LmxM.33.2000 32 SSDIALR|VV 0.136 . LmxM.33.2000 38 RVVEDLK|RH 0.054 . LmxM.33.2000 39 VVEDLKR|HP 0.138 . LmxM.33.2000 47 PDVAEVR|YT 0.090 . LmxM.33.2000 64 VAAYFER|VE 0.079 . LmxM.33.2000 67 YFERVER|EI 0.244 . LmxM.33.2000 80 AEHGAVK|VK 0.054 . LmxM.33.2000 82 HGAVKVK|IL 0.071 . LmxM.33.2000 99 DTTGLIR|VE 0.070 . LmxM.33.2000 118 VPDVDGK|VL 0.064 . LmxM.33.2000 142 HESWFGK|EG 0.098 . LmxM.33.2000 150 GSPQFEK|LE 0.061 . LmxM.33.2000 170 ESWHHSR|TG 0.087 . LmxM.33.2000 186 TSVEPNR|KD 0.091 . LmxM.33.2000 187 SVEPNRK|DM 0.079 . LmxM.33.2000 203 PSWAISR|DA 0.151 . LmxM.33.2000 207 ISRDAGR|YL 0.102 . LmxM.33.2000 216 CNCALYR|AL 0.101 . LmxM.33.2000 219 ALYRALR|LQ 0.195 . LmxM.33.2000 223 ALRLQER|NP 0.098 . LmxM.33.2000 240 HVVDPIR|GK 0.099 . LmxM.33.2000 242 VDPIRGK|TE 0.063 . LmxM.33.2000 265 VQSVQVK|CL 0.086 . ____________________________^_________________

  • Fasta :-

    >LmxM.33.2000 ATGCTGCACTCCAAGGCGGGCATCGTCGTATTCATCACGGGCTACGGACCCTTCGCCACT GTGAAGGTGAACCCCAGCTCCGACATTGCCCTTCGGGTCGTGGAGGACCTGAAGCGTCAC CCCGACGTAGCAGAGGTGCGGTACACGGAGCTGGATGTCAGCGTGACAGCCGTCGCGGCG TACTTCGAGAGGGTGGAGAGGGAAATTGCCGAAATCATTGCCGAACACGGCGCCGTCAAG GTGAAGATCCTTCTCTGCCACCTAGGTGTTCACAATGACACAACGGGGCTCATCCGCGTC GAGGTGCAGGGCTACAACGAGCTTTTTGCGAACGTCCCTGACGTGGACGGTAAGGTGCTC AATCACGAGCCCATTGCACCGGAGGACGGCCCGATTGAAGTGTTTCACGAGAGCTGGTTC GGCAAGGAGGGCTCTCCGCAGTTTGAGAAGCTGGAGAGCTTGATTCAGGAGGTGAACGAT ACGATTGCCGAGTCATGGCATCACTCTAGAACGGGTGCTGTGACTAACAATGAGATGACA TCAGTGGAGCCGAACAGGAAGGACATGATGATGCCAGCGTTTCAGGCGCCGAGCTGGGCA ATTTCGCGCGACGCCGGGCGCTACCTGTGCAACTGCGCCCTCTATCGCGCGCTGCGACTT CAGGAAAGGAACCCGGGTGTTGTCTATGGCATCTTCATTCACGTTGTCGATCCGATTCGC GGCAAGACGGAGATCGAGGGCGGACCGATTGTGGCTTACAACCCAACGACGATGGTGCAG TCGGTGCAAGTGAAGTGTCTCATGAACGGCCTGCTGTCTTTGATGACCTCGTGA
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  • Fasta :-

    MLHSKAGIVVFITGYGPFATVKVNPSSDIALRVVEDLKRHPDVAEVRYTELDVSVTAVAA YFERVEREIAEIIAEHGAVKVKILLCHLGVHNDTTGLIRVEVQGYNELFANVPDVDGKVL NHEPIAPEDGPIEVFHESWFGKEGSPQFEKLESLIQEVNDTIAESWHHSRTGAVTNNEMT SVEPNRKDMMMPAFQAPSWAISRDAGRYLCNCALYRALRLQERNPGVVYGIFIHVVDPIR GKTEIEGGPIVAYNPTTMVQSVQVKCLMNGLLSLMTS

  • title: catalytic triad
  • coordinates: E101,C210,H234
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India