NCLIV_001135 | hypothetical protein

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_001135OTHER0.9999950.0000050.000000
No Results

  • Fasta :-

    >NCLIV_001135 METAASGAQPRSPAALSSANGATSETGLAPTPIDGSSSSPSAAAVAVSTATNSEGTSPPG KKVSGEAPDAALPVLAPYVPGTVVGHGDGVSLTSSVGTANDSRARRSASSAKKDAQGSKS SHGVLENVVDALEHINSPTWVQPPGAVVPAGGSPVSVDSDEARTPVVGRAKSKRLHFASS HQAYTGIDPWLDNYEIDLEDLGPNFRSGKLTNAQRLDLATYAWTQNNFTDVKGAVVLFHS YTSHALWDFMRHQPAAREVVAQVDTQTGETEAVDMQSWVPIYNGSWVEAFWNQGFNVYAM DHQSHGRSAGWREWRCNVEKFDHLVDDALLFIKTVVATDQMTPDNAPIYVLGYSMGGNIT LQTLARIFLDHSEEGKKLQSRVKAAVLLAPMLRILFDKKTEFLAKINKSVISCCMPNLRL GRSSGDEAYAYLDRWYEKDPYAYSGSAKSRMIANLYSATLKTKKLIKNLPAHLRILCLQG TADSTVDHRAALLLAKTPVRLDLMYLTGWSHYLAKQIGFELLRDLVAAWVHAKLQLDKAQ PTRNDSFEQWSAQSCSRPGRVAVGTQTSFAALTPPVQATVSAKSAAATDAPVPEASAAAQ TPEAATSKL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_001135.fa Sequence name : NCLIV_001135 Sequence length : 609 VALUES OF COMPUTED PARAMETERS Coef20 : 4.065 CoefTot : 0.276 ChDiff : -1 ZoneTo : 24 KR : 1 DE : 1 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.176 1.347 0.094 0.564 MesoH : 0.085 0.378 -0.205 0.236 MuHd_075 : 16.153 7.807 3.102 3.072 MuHd_095 : 11.517 13.742 3.672 2.970 MuHd_100 : 5.321 11.565 2.537 1.932 MuHd_105 : 7.943 11.428 2.252 1.995 Hmax_075 : 7.933 5.600 1.239 2.823 Hmax_095 : 13.200 12.000 1.839 4.040 Hmax_100 : 13.200 12.100 1.839 4.040 Hmax_105 : 2.900 2.537 -1.346 1.250 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9496 0.0504 DFMC : 0.9125 0.0875
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 609 NCLIV_001135 METAASGAQPRSPAALSSANGATSETGLAPTPIDGSSSSPSAAAVAVSTATNSEGTSPPGKKVSGEAPDAALPVLAPYVP 80 GTVVGHGDGVSLTSSVGTANDSRARRSASSAKKDAQGSKSSHGVLENVVDALEHINSPTWVQPPGAVVPAGGSPVSVDSD 160 EARTPVVGRAKSKRLHFASSHQAYTGIDPWLDNYEIDLEDLGPNFRSGKLTNAQRLDLATYAWTQNNFTDVKGAVVLFHS 240 YTSHALWDFMRHQPAAREVVAQVDTQTGETEAVDMQSWVPIYNGSWVEAFWNQGFNVYAMDHQSHGRSAGWREWRCNVEK 320 FDHLVDDALLFIKTVVATDQMTPDNAPIYVLGYSMGGNITLQTLARIFLDHSEEGKKLQSRVKAAVLLAPMLRILFDKKT 400 EFLAKINKSVISCCMPNLRLGRSSGDEAYAYLDRWYEKDPYAYSGSAKSRMIANLYSATLKTKKLIKNLPAHLRILCLQG 480 TADSTVDHRAALLLAKTPVRLDLMYLTGWSHYLAKQIGFELLRDLVAAWVHAKLQLDKAQPTRNDSFEQWSAQSCSRPGR 560 VAVGTQTSFAALTPPVQATVSAKSAAATDAPVPEASAAAQTPEAATSKL 640 ................................................................................ 80 .........................P...................................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_001135 11 ASGAQPR|SP 0.125 . NCLIV_001135 61 GTSPPGK|KV 0.112 . NCLIV_001135 62 TSPPGKK|VS 0.134 . NCLIV_001135 103 GTANDSR|AR 0.076 . NCLIV_001135 105 ANDSRAR|RS 0.071 . NCLIV_001135 106 NDSRARR|SA 0.820 *ProP* NCLIV_001135 112 RSASSAK|KD 0.079 . NCLIV_001135 113 SASSAKK|DA 0.214 . NCLIV_001135 119 KDAQGSK|SS 0.105 . NCLIV_001135 163 VDSDEAR|TP 0.104 . NCLIV_001135 169 RTPVVGR|AK 0.124 . NCLIV_001135 171 PVVGRAK|SK 0.077 . NCLIV_001135 173 VGRAKSK|RL 0.069 . NCLIV_001135 174 GRAKSKR|LH 0.353 . NCLIV_001135 206 DLGPNFR|SG 0.082 . NCLIV_001135 209 PNFRSGK|LT 0.157 . NCLIV_001135 215 KLTNAQR|LD 0.069 . NCLIV_001135 232 NNFTDVK|GA 0.068 . NCLIV_001135 251 ALWDFMR|HQ 0.102 . NCLIV_001135 257 RHQPAAR|EV 0.181 . NCLIV_001135 307 DHQSHGR|SA 0.230 . NCLIV_001135 312 GRSAGWR|EW 0.135 . NCLIV_001135 315 AGWREWR|CN 0.270 . NCLIV_001135 320 WRCNVEK|FD 0.077 . NCLIV_001135 333 DALLFIK|TV 0.065 . NCLIV_001135 366 TLQTLAR|IF 0.089 . NCLIV_001135 376 DHSEEGK|KL 0.067 . NCLIV_001135 377 HSEEGKK|LQ 0.088 . NCLIV_001135 381 GKKLQSR|VK 0.101 . NCLIV_001135 383 KLQSRVK|AA 0.069 . NCLIV_001135 393 LLAPMLR|IL 0.100 . NCLIV_001135 398 LRILFDK|KT 0.068 . NCLIV_001135 399 RILFDKK|TE 0.071 . NCLIV_001135 405 KTEFLAK|IN 0.067 . NCLIV_001135 408 FLAKINK|SV 0.092 . NCLIV_001135 419 CCMPNLR|LG 0.074 . NCLIV_001135 422 PNLRLGR|SS 0.478 . NCLIV_001135 434 AYAYLDR|WY 0.086 . NCLIV_001135 438 LDRWYEK|DP 0.073 . NCLIV_001135 448 AYSGSAK|SR 0.098 . NCLIV_001135 450 SGSAKSR|MI 0.143 . NCLIV_001135 461 LYSATLK|TK 0.060 . NCLIV_001135 463 SATLKTK|KL 0.074 . NCLIV_001135 464 ATLKTKK|LI 0.082 . NCLIV_001135 467 KTKKLIK|NL 0.067 . NCLIV_001135 474 NLPAHLR|IL 0.091 . NCLIV_001135 489 DSTVDHR|AA 0.077 . NCLIV_001135 496 AALLLAK|TP 0.055 . NCLIV_001135 500 LAKTPVR|LD 0.078 . NCLIV_001135 515 WSHYLAK|QI 0.091 . NCLIV_001135 523 IGFELLR|DL 0.089 . NCLIV_001135 533 AAWVHAK|LQ 0.060 . NCLIV_001135 538 AKLQLDK|AQ 0.063 . NCLIV_001135 543 DKAQPTR|ND 0.107 . NCLIV_001135 557 SAQSCSR|PG 0.097 . NCLIV_001135 560 SCSRPGR|VA 0.475 . NCLIV_001135 583 QATVSAK|SA 0.102 . NCLIV_001135 608 PEAATSK|L- 0.063 . ____________________________^_________________

  • Fasta :-

    >NCLIV_001135 ATGGAAACCGCAGCCTCTGGAGCGCAACCGCGGTCGCCAGCAGCCCTCTCCTCCGCGAAC GGCGCGACGAGCGAAACGGGGCTGGCGCCGACTCCTATCGACGGCTCGTCTTCTTCGCCG TCGGCTGCGGCCGTGGCTGTCAGTACTGCCACAAACTCCGAAGGAACTTCACCGCCAGGA AAAAAGGTCAGTGGCGAAGCACCCGACGCGGCTCTGCCTGTCCTCGCTCCTTACGTCCCC GGCACGGTCGTCGGCCACGGCGACGGAGTCTCGCTTACCAGTTCTGTTGGGACGGCGAAC GACTCGCGCGCGCGAAGGTCGGCGAGTTCAGCCAAGAAAGACGCACAGGGAAGCAAATCG TCCCATGGCGTGCTCGAGAATGTCGTCGATGCGCTGGAACACATCAACAGTCCTACCTGG GTCCAACCGCCTGGCGCTGTCGTCCCGGCTGGAGGCTCCCCCGTTTCGGTCGACAGCGAC GAAGCTCGCACGCCGGTCGTGGGGAGGGCCAAGAGCAAGAGGCTGCACTTTGCGTCCAGT CATCAGGCCTATACAGGCATTGATCCGTGGCTAGATAACTACGAGATTGATCTGGAAGAC CTCGGTCCGAACTTCCGGTCCGGGAAGCTGACGAACGCCCAGCGCCTTGATCTGGCTACT TATGCATGGACGCAAAACAACTTCACAGATGTAAAAGGCGCAGTCGTGCTCTTCCATTCC TACACGTCTCATGCCCTCTGGGACTTCATGCGGCACCAGCCCGCCGCACGTGAAGTCGTC GCCCAAGTCGACACACAGACTGGAGAGACCGAGGCCGTTGACATGCAGTCCTGGGTTCCT ATCTACAACGGAAGTTGGGTAGAGGCCTTCTGGAACCAAGGATTCAATGTGTATGCAATG GACCATCAGAGCCACGGTCGCTCAGCTGGGTGGAGAGAGTGGCGATGCAATGTGGAGAAA TTTGATCACCTGGTTGACGACGCCTTGCTCTTTATCAAGACTGTTGTCGCAACAGACCAA ATGACACCCGACAATGCGCCCATCTATGTCCTGGGCTACTCAATGGGCGGTAACATCACA CTTCAGACGCTGGCACGCATTTTCTTGGATCACTCAGAGGAAGGGAAAAAGCTGCAGTCC CGTGTCAAGGCTGCAGTTCTTCTCGCACCGATGCTGCGGATTTTGTTCGACAAAAAGACG GAGTTTCTCGCCAAAATCAACAAAAGCGTCATCAGTTGCTGCATGCCGAATCTGCGGCTG GGACGCTCCTCCGGTGACGAGGCATACGCCTACCTCGACCGATGGTATGAGAAGGATCCC TACGCGTACTCAGGCAGTGCCAAATCGCGTATGATCGCGAACCTCTACTCTGCGACACTG AAAACGAAGAAGCTCATAAAGAACCTCCCCGCCCATCTGAGAATTCTCTGCCTCCAAGGA ACAGCAGACTCAACAGTGGACCACAGGGCGGCTTTGCTGCTTGCCAAAACACCCGTTCGA CTCGACCTAATGTATCTGACTGGGTGGAGTCATTACTTAGCCAAGCAGATTGGATTTGAA CTTTTGAGAGATCTGGTCGCGGCATGGGTGCATGCGAAACTGCAACTTGACAAGGCTCAG CCAACTCGCAATGACTCGTTCGAGCAGTGGTCGGCCCAGTCGTGCAGCCGACCAGGTCGT GTCGCGGTTGGTACTCAGACGTCTTTTGCCGCGCTGACGCCTCCCGTGCAGGCCACGGTT TCGGCCAAGTCAGCTGCGGCTACAGATGCGCCTGTCCCGGAGGCCTCTGCCGCTGCCCAG ACTCCAGAGGCTGCTACCTCTAAACTTTAG
  • Download Fasta

  • Fasta :-

    METAASGAQPRSPAALSSANGATSETGLAPTPIDGSSSSPSAAAVAVSTATNSEGTSPPG KKVSGEAPDAALPVLAPYVPGTVVGHGDGVSLTSSVGTANDSRARRSASSAKKDAQGSKS SHGVLENVVDALEHINSPTWVQPPGAVVPAGGSPVSVDSDEARTPVVGRAKSKRLHFASS HQAYTGIDPWLDNYEIDLEDLGPNFRSGKLTNAQRLDLATYAWTQNNFTDVKGAVVLFHS YTSHALWDFMRHQPAAREVVAQVDTQTGETEAVDMQSWVPIYNGSWVEAFWNQGFNVYAM DHQSHGRSAGWREWRCNVEKFDHLVDDALLFIKTVVATDQMTPDNAPIYVLGYSMGGNIT LQTLARIFLDHSEEGKKLQSRVKAAVLLAPMLRILFDKKTEFLAKINKSVISCCMPNLRL GRSSGDEAYAYLDRWYEKDPYAYSGSAKSRMIANLYSATLKTKKLIKNLPAHLRILCLQG TADSTVDHRAALLLAKTPVRLDLMYLTGWSHYLAKQIGFELLRDLVAAWVHAKLQLDKAQ PTRNDSFEQWSAQSCSRPGRVAVGTQTSFAALTPPVQATVSAKSAAATDAPVPEASAAAQ TPEAATSKL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_001135110 SRSASSAKKD0.996unspNCLIV_001135110 SRSASSAKKD0.996unspNCLIV_001135110 SRSASSAKKD0.996unspNCLIV_001135424 SLGRSSGDEA0.997unspNCLIV_001135484 SGTADSTVDH0.991unspNCLIV_001135546 STRNDSFEQW0.991unspNCLIV_001135584 SVSAKSAAAT0.992unspNCLIV_00113564 SGKKVSGEAP0.992unspNCLIV_001135107 SRARRSASSA0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India