NCLIV_004380 | cathepsin L, related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_004380OTHER0.9999640.0000230.000013
No Results

  • Fasta :-

    >NCLIV_004380 MDNSETHYVSFLNGEGDDGLENGELHQRRGVRAGGVAATPYVVTTRTYFWKKFLRQRNFK TRAWIALVAAAVSLLVFASFLIQWQGDDDRGVFPPSPVEDHKTPVNIWEWKEEHFQNAFG SFRATYGKSYATEEETQKRYAIFKNNLAYIHTHNQQGYSYSLKMNHFGDLSREEFRRKYL GYNKSRNLKSNNLGVATELLKVSPSDVPSAVDWREKGCVTPVKDQRDCGSCWAFSATGAL EGAHCAKTGELLSLSEQELVDCSLAEGNQGCSGGEMNDAFQYVVDSGGLCSEEGYPYLAR DGECKRACKKVVTISGFKDVPRKSETAMKAALAHSPVSIAIEADQLPFQFYHEGVFDASC GTDLDHGVLLVGYGTDKETKKDFWIMKNSWGSGWGRDGYMYMAMHKGEETVPLDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_004380.fa Sequence name : NCLIV_004380 Sequence length : 415 VALUES OF COMPUTED PARAMETERS Coef20 : 2.633 CoefTot : 0.000 ChDiff : -8 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.276 2.665 0.446 0.838 MesoH : -0.697 0.170 -0.327 0.179 MuHd_075 : 17.356 8.392 4.794 2.311 MuHd_095 : 21.190 13.797 5.546 4.055 MuHd_100 : 12.909 12.653 3.898 3.666 MuHd_105 : 2.248 8.290 1.242 2.324 Hmax_075 : -8.137 -2.450 -4.567 1.024 Hmax_095 : 2.600 3.900 -1.307 2.760 Hmax_100 : -6.600 1.200 -3.491 2.100 Hmax_105 : -4.200 -0.117 -3.348 1.155 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9994 0.0006 DFMC : 0.9994 0.0006
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 415 NCLIV_004380 MDNSETHYVSFLNGEGDDGLENGELHQRRGVRAGGVAATPYVVTTRTYFWKKFLRQRNFKTRAWIALVAAAVSLLVFASF 80 LIQWQGDDDRGVFPPSPVEDHKTPVNIWEWKEEHFQNAFGSFRATYGKSYATEEETQKRYAIFKNNLAYIHTHNQQGYSY 160 SLKMNHFGDLSREEFRRKYLGYNKSRNLKSNNLGVATELLKVSPSDVPSAVDWREKGCVTPVKDQRDCGSCWAFSATGAL 240 EGAHCAKTGELLSLSEQELVDCSLAEGNQGCSGGEMNDAFQYVVDSGGLCSEEGYPYLARDGECKRACKKVVTISGFKDV 320 PRKSETAMKAALAHSPVSIAIEADQLPFQFYHEGVFDASCGTDLDHGVLLVGYGTDKETKKDFWIMKNSWGSGWGRDGYM 400 YMAMHKGEETVPLDF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_004380 28 NGELHQR|RG 0.071 . NCLIV_004380 29 GELHQRR|GV 0.375 . NCLIV_004380 32 HQRRGVR|AG 0.271 . NCLIV_004380 46 PYVVTTR|TY 0.084 . NCLIV_004380 51 TRTYFWK|KF 0.074 . NCLIV_004380 52 RTYFWKK|FL 0.122 . NCLIV_004380 55 FWKKFLR|QR 0.082 . NCLIV_004380 57 KKFLRQR|NF 0.077 . NCLIV_004380 60 LRQRNFK|TR 0.120 . NCLIV_004380 62 QRNFKTR|AW 0.174 . NCLIV_004380 90 WQGDDDR|GV 0.108 . NCLIV_004380 102 SPVEDHK|TP 0.062 . NCLIV_004380 111 VNIWEWK|EE 0.063 . NCLIV_004380 123 NAFGSFR|AT 0.090 . NCLIV_004380 128 FRATYGK|SY 0.114 . NCLIV_004380 138 TEEETQK|RY 0.057 . NCLIV_004380 139 EEETQKR|YA 0.206 . NCLIV_004380 144 KRYAIFK|NN 0.084 . NCLIV_004380 163 GYSYSLK|MN 0.075 . NCLIV_004380 172 HFGDLSR|EE 0.067 . NCLIV_004380 176 LSREEFR|RK 0.085 . NCLIV_004380 177 SREEFRR|KY 0.157 . NCLIV_004380 178 REEFRRK|YL 0.096 . NCLIV_004380 184 KYLGYNK|SR 0.058 . NCLIV_004380 186 LGYNKSR|NL 0.088 . NCLIV_004380 189 NKSRNLK|SN 0.253 . NCLIV_004380 201 VATELLK|VS 0.052 . NCLIV_004380 214 PSAVDWR|EK 0.120 . NCLIV_004380 216 AVDWREK|GC 0.059 . NCLIV_004380 223 GCVTPVK|DQ 0.082 . NCLIV_004380 226 TPVKDQR|DC 0.133 . NCLIV_004380 247 EGAHCAK|TG 0.063 . NCLIV_004380 300 GYPYLAR|DG 0.110 . NCLIV_004380 305 ARDGECK|RA 0.079 . NCLIV_004380 306 RDGECKR|AC 0.189 . NCLIV_004380 309 ECKRACK|KV 0.144 . NCLIV_004380 310 CKRACKK|VV 0.138 . NCLIV_004380 318 VTISGFK|DV 0.066 . NCLIV_004380 322 GFKDVPR|KS 0.122 . NCLIV_004380 323 FKDVPRK|SE 0.110 . NCLIV_004380 329 KSETAMK|AA 0.071 . NCLIV_004380 377 VGYGTDK|ET 0.060 . NCLIV_004380 380 GTDKETK|KD 0.064 . NCLIV_004380 381 TDKETKK|DF 0.141 . NCLIV_004380 387 KDFWIMK|NS 0.071 . NCLIV_004380 396 WGSGWGR|DG 0.132 . NCLIV_004380 406 MYMAMHK|GE 0.071 . ____________________________^_________________

  • Fasta :-

    >NCLIV_004380 ATGGACAACAGTGAGACGCACTACGTCTCCTTCCTCAACGGCGAGGGCGACGACGGATTG GAGAACGGCGAGCTCCACCAGCGACGAGGCGTCCGAGCCGGCGGCGTGGCTGCAACTCCC TACGTAGTAACGACTCGGACGTACTTTTGGAAGAAATTCCTGCGTCAGCGCAACTTTAAA ACTCGGGCCTGGATCGCACTCGTAGCAGCGGCTGTGTCTCTCCTTGTCTTTGCCTCCTTC CTCATTCAGTGGCAGGGAGATGACGATCGGGGTGTTTTCCCGCCGTCACCAGTCGAGGAC CACAAAACCCCGGTGAACATCTGGGAGTGGAAAGAAGAACACTTCCAGAACGCCTTCGGC AGCTTCCGAGCCACCTACGGCAAGAGCTACGCGACCGAGGAGGAGACACAAAAGCGATAT GCCATCTTCAAAAACAACCTCGCTTACATCCACACGCACAACCAACAAGGGTATTCGTAC TCGCTCAAGATGAACCATTTCGGGGACTTGTCTCGCGAAGAGTTTCGCCGCAAGTACCTC GGCTACAACAAGTCTCGCAATCTCAAGTCCAACAACCTGGGGGTGGCGACGGAGCTGTTG AAGGTTTCGCCGAGCGACGTGCCGTCTGCGGTGGACTGGCGAGAGAAGGGGTGTGTGACG CCTGTGAAGGATCAGCGCGATTGCGGCTCGTGCTGGGCGTTCTCCGCCACGGGAGCGTTG GAGGGAGCGCACTGCGCGAAGACTGGCGAGTTGCTGAGTTTGAGCGAACAGGAGTTGGTG GATTGCTCACTTGCAGAAGGCAACCAAGGCTGCAGCGGCGGAGAGATGAACGACGCGTTC CAGTACGTCGTGGACAGCGGCGGCCTGTGCTCGGAGGAGGGGTATCCGTACCTCGCTCGA GACGGAGAGTGCAAGAGGGCGTGCAAGAAAGTGGTGACCATCTCGGGGTTCAAGGACGTG CCGAGGAAGAGCGAGACGGCGATGAAGGCCGCGCTGGCTCACAGCCCCGTGAGCATCGCG ATCGAGGCCGATCAGCTGCCTTTCCAGTTCTACCACGAAGGCGTTTTCGACGCGTCCTGC GGAACCGACCTCGACCACGGCGTCCTCCTCGTGGGCTACGGAACCGACAAAGAGACAAAG AAAGACTTCTGGATCATGAAAAACTCCTGGGGATCAGGATGGGGCCGAGACGGGTACATG TACATGGCCATGCACAAGGGCGAAGAGACTGTGCCTTTGGACTTTTGA
  • Download Fasta

  • Fasta :-

    MDNSETHYVSFLNGEGDDGLENGELHQRRGVRAGGVAATPYVVTTRTYFWKKFLRQRNFK TRAWIALVAAAVSLLVFASFLIQWQGDDDRGVFPPSPVEDHKTPVNIWEWKEEHFQNAFG SFRATYGKSYATEEETQKRYAIFKNNLAYIHTHNQQGYSYSLKMNHFGDLSREEFRRKYL GYNKSRNLKSNNLGVATELLKVSPSDVPSAVDWREKGCVTPVKDQRDCGSCWAFSATGAL EGAHCAKTGELLSLSEQELVDCSLAEGNQGCSGGEMNDAFQYVVDSGGLCSEEGYPYLAR DGECKRACKKVVTISGFKDVPRKSETAMKAALAHSPVSIAIEADQLPFQFYHEGVFDASC GTDLDHGVLLVGYGTDKETKKDFWIMKNSWGSGWGRDGYMYMAMHKGEETVPLDF

  • title: active site
  • coordinates: Q225,C231,H366,N388
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_004380203 SLLKVSPSDV0.993unspNCLIV_004380203 SLLKVSPSDV0.993unspNCLIV_004380203 SLLKVSPSDV0.993unspNCLIV_004380253 SGELLSLSEQ0.991unspNCLIV_004380324 SVPRKSETAM0.994unspNCLIV_0043808 YSETHYVSFL0.99unspNCLIV_00438096 SVFPPSPVED0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India