NCLIV_004990 | spry domain containing protein, related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_004990OTHER0.9869110.0092150.003874
No Results

  • Fasta :-

    >NCLIV_004990 MRLPVSSLSPCADDRPYVCFSWRYRDAFLTLSTDRRVILGHKGWSSAFATHCSEKDKWYF EVEVLPSETQSLRFIGYSPEGLPPLKAHWRVGWACRYQKYDVPIGGNAHSFALCGACNEV PTVATGGLRRPIASYGASHDLPELKEGDIIGCFLTLHEPRWWLPDPRKDPKLHEFLQAGI LCSPDAPPPCVVNEGAWIEFSVNGQRLGRVFEGVIGNGVYHPAVSLYMGAKLKLNPGPDF AFPPPPSEGFQPCSDMRRPHIP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_004990.fa Sequence name : NCLIV_004990 Sequence length : 262 VALUES OF COMPUTED PARAMETERS Coef20 : 4.067 CoefTot : 0.350 ChDiff : 0 ZoneTo : 12 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.853 0.894 0.149 0.496 MesoH : -0.404 0.196 -0.325 0.254 MuHd_075 : 5.772 7.152 1.718 3.607 MuHd_095 : 19.716 11.297 5.297 3.252 MuHd_100 : 15.162 13.904 4.975 2.771 MuHd_105 : 11.008 13.924 3.921 3.008 Hmax_075 : 0.500 8.000 -0.574 3.400 Hmax_095 : 10.600 7.700 0.726 3.520 Hmax_100 : -0.100 8.100 0.353 1.790 Hmax_105 : 2.000 6.500 0.413 2.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6955 0.3045 DFMC : 0.8248 0.1752
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 262 NCLIV_004990 MRLPVSSLSPCADDRPYVCFSWRYRDAFLTLSTDRRVILGHKGWSSAFATHCSEKDKWYFEVEVLPSETQSLRFIGYSPE 80 GLPPLKAHWRVGWACRYQKYDVPIGGNAHSFALCGACNEVPTVATGGLRRPIASYGASHDLPELKEGDIIGCFLTLHEPR 160 WWLPDPRKDPKLHEFLQAGILCSPDAPPPCVVNEGAWIEFSVNGQRLGRVFEGVIGNGVYHPAVSLYMGAKLKLNPGPDF 240 AFPPPPSEGFQPCSDMRRPHIP 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_004990 2 -----MR|LP 0.074 . NCLIV_004990 15 SPCADDR|PY 0.073 . NCLIV_004990 23 YVCFSWR|YR 0.108 . NCLIV_004990 25 CFSWRYR|DA 0.150 . NCLIV_004990 35 LTLSTDR|RV 0.089 . NCLIV_004990 36 TLSTDRR|VI 0.157 . NCLIV_004990 42 RVILGHK|GW 0.069 . NCLIV_004990 55 ATHCSEK|DK 0.078 . NCLIV_004990 57 HCSEKDK|WY 0.094 . NCLIV_004990 73 SETQSLR|FI 0.124 . NCLIV_004990 86 EGLPPLK|AH 0.060 . NCLIV_004990 90 PLKAHWR|VG 0.091 . NCLIV_004990 96 RVGWACR|YQ 0.092 . NCLIV_004990 99 WACRYQK|YD 0.140 . NCLIV_004990 129 VATGGLR|RP 0.068 . NCLIV_004990 130 ATGGLRR|PI 0.138 . NCLIV_004990 145 HDLPELK|EG 0.063 . NCLIV_004990 160 LTLHEPR|WW 0.080 . NCLIV_004990 167 WWLPDPR|KD 0.071 . NCLIV_004990 168 WLPDPRK|DP 0.083 . NCLIV_004990 171 DPRKDPK|LH 0.069 . NCLIV_004990 206 FSVNGQR|LG 0.073 . NCLIV_004990 209 NGQRLGR|VF 0.274 . NCLIV_004990 231 SLYMGAK|LK 0.064 . NCLIV_004990 233 YMGAKLK|LN 0.058 . NCLIV_004990 257 QPCSDMR|RP 0.079 . NCLIV_004990 258 PCSDMRR|PH 0.146 . ____________________________^_________________

  • Fasta :-

    >NCLIV_004990 ATGCGACTTCCTGTCTCCTCTCTGTCTCCTTGTGCAGACGACCGCCCCTACGTCTGCTTC TCGTGGCGATACCGCGACGCCTTCTTGACGCTCTCCACCGACCGCCGCGTCATCTTAGGC CACAAGGGGTGGAGCAGTGCCTTTGCGACGCACTGCTCAGAGAAAGATAAGTGGTATTTC GAGGTCGAGGTCTTGCCTAGCGAGACGCAGAGCCTTCGCTTCATCGGATACTCCCCGGAG GGCCTCCCGCCCCTCAAAGCGCATTGGCGAGTGGGATGGGCGTGTCGGTACCAAAAGTAC GACGTGCCCATTGGAGGCAACGCGCACTCGTTTGCGCTCTGCGGCGCATGCAACGAAGTC CCGACGGTTGCCACTGGAGGGCTTAGGAGGCCGATCGCGAGTTATGGCGCGTCCCACGAC CTTCCCGAGCTGAAAGAAGGAGACATTATCGGCTGCTTCTTGACGCTCCACGAGCCTCGT TGGTGGCTGCCTGACCCTCGAAAGGATCCGAAGCTTCACGAGTTTCTTCAGGCGGGAATC CTGTGCAGTCCTGATGCCCCGCCGCCCTGCGTTGTCAATGAGGGGGCGTGGATTGAGTTT TCTGTCAACGGACAAAGGCTCGGGCGTGTCTTCGAAGGCGTGATCGGAAACGGCGTGTAT CACCCAGCTGTCTCGCTGTATATGGGGGCGAAGCTCAAACTCAATCCAGGCCCAGACTTT GCTTTTCCGCCTCCTCCCTCCGAGGGCTTTCAGCCGTGCAGCGACATGCGCAGACCTCAC ATTCCCTGA
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  • Fasta :-

    MRLPVSSLSPCADDRPYVCFSWRYRDAFLTLSTDRRVILGHKGWSSAFATHCSEKDKWYF EVEVLPSETQSLRFIGYSPEGLPPLKAHWRVGWACRYQKYDVPIGGNAHSFALCGACNEV PTVATGGLRRPIASYGASHDLPELKEGDIIGCFLTLHEPRWWLPDPRKDPKLHEFLQAGI LCSPDAPPPCVVNEGAWIEFSVNGQRLGRVFEGVIGNGVYHPAVSLYMGAKLKLNPGPDF AFPPPPSEGFQPCSDMRRPHIP

    No Results
No Results
No Results
IDSitePeptideScoreMethod
NCLIV_0049909 SVSSLSPCAD0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India