NCLIV_007520 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_007520OTHER0.9998820.0000490.000069
No Results

  • Fasta :-

    >NCLIV_007520 MLSDDHACSPRNFFPGRIFNDHSRNLNLYGAGDAQGEASTDSVEVDYRGDEVQVATLLQL LAGRHNPATPRGKRLLTDANSNVLLYLSGHGGDGFLKFQDWEEISSVDLADAVAQMKAQR RFRQMLLIAETCQGSTLLDAITTPGVLGLASSGPKESSYSHHADGFLGVAVIDRWTYYTL QFFEKSVKDSSSPATFQQLLDSYSRKQLMSTASARTELFDKSLADTKLTEFFAAASTLHA TDSMYPLRPRAATTGKKEKGTGENEARVRRAGVSVGTYYARHFALVREEEGEMGEEEGAR DRKQEERGRDHEGATTETVETLWEKWAPHGDVHPAAVAGLILLAMGTAGATSVLL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_007520.fa Sequence name : NCLIV_007520 Sequence length : 355 VALUES OF COMPUTED PARAMETERS Coef20 : 3.720 CoefTot : 0.234 ChDiff : -11 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.994 1.859 0.349 0.686 MesoH : -0.345 0.201 -0.345 0.199 MuHd_075 : 12.080 12.235 5.625 3.335 MuHd_095 : 12.085 8.203 1.810 2.691 MuHd_100 : 8.364 3.273 0.572 1.066 MuHd_105 : 13.406 3.045 1.211 1.840 Hmax_075 : 4.550 9.683 1.411 3.512 Hmax_095 : -1.400 3.325 -2.105 1.698 Hmax_100 : -2.500 2.000 -1.685 1.560 Hmax_105 : 6.650 5.500 -1.420 2.357 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9653 0.0347 DFMC : 0.9702 0.0298
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 355 NCLIV_007520 MLSDDHACSPRNFFPGRIFNDHSRNLNLYGAGDAQGEASTDSVEVDYRGDEVQVATLLQLLAGRHNPATPRGKRLLTDAN 80 SNVLLYLSGHGGDGFLKFQDWEEISSVDLADAVAQMKAQRRFRQMLLIAETCQGSTLLDAITTPGVLGLASSGPKESSYS 160 HHADGFLGVAVIDRWTYYTLQFFEKSVKDSSSPATFQQLLDSYSRKQLMSTASARTELFDKSLADTKLTEFFAAASTLHA 240 TDSMYPLRPRAATTGKKEKGTGENEARVRRAGVSVGTYYARHFALVREEEGEMGEEEGARDRKQEERGRDHEGATTETVE 320 TLWEKWAPHGDVHPAAVAGLILLAMGTAGATSVLL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_007520 11 DHACSPR|NF 0.118 . NCLIV_007520 17 RNFFPGR|IF 0.107 . NCLIV_007520 24 IFNDHSR|NL 0.096 . NCLIV_007520 48 SVEVDYR|GD 0.113 . NCLIV_007520 64 LQLLAGR|HN 0.077 . NCLIV_007520 71 HNPATPR|GK 0.087 . NCLIV_007520 73 PATPRGK|RL 0.058 . NCLIV_007520 74 ATPRGKR|LL 0.447 . NCLIV_007520 97 GGDGFLK|FQ 0.070 . NCLIV_007520 117 DAVAQMK|AQ 0.064 . NCLIV_007520 120 AQMKAQR|RF 0.092 . NCLIV_007520 121 QMKAQRR|FR 0.141 . NCLIV_007520 123 KAQRRFR|QM 0.229 . NCLIV_007520 155 LASSGPK|ES 0.070 . NCLIV_007520 174 GVAVIDR|WT 0.096 . NCLIV_007520 185 TLQFFEK|SV 0.133 . NCLIV_007520 188 FFEKSVK|DS 0.065 . NCLIV_007520 205 LLDSYSR|KQ 0.066 . NCLIV_007520 206 LDSYSRK|QL 0.108 . NCLIV_007520 215 MSTASAR|TE 0.072 . NCLIV_007520 221 RTELFDK|SL 0.077 . NCLIV_007520 227 KSLADTK|LT 0.059 . NCLIV_007520 248 DSMYPLR|PR 0.079 . NCLIV_007520 250 MYPLRPR|AA 0.110 . NCLIV_007520 256 RAATTGK|KE 0.062 . NCLIV_007520 257 AATTGKK|EK 0.120 . NCLIV_007520 259 TTGKKEK|GT 0.109 . NCLIV_007520 267 TGENEAR|VR 0.098 . NCLIV_007520 269 ENEARVR|RA 0.125 . NCLIV_007520 270 NEARVRR|AG 0.445 . NCLIV_007520 281 VGTYYAR|HF 0.084 . NCLIV_007520 287 RHFALVR|EE 0.083 . NCLIV_007520 300 GEEEGAR|DR 0.130 . NCLIV_007520 302 EEGARDR|KQ 0.083 . NCLIV_007520 303 EGARDRK|QE 0.306 . NCLIV_007520 307 DRKQEER|GR 0.124 . NCLIV_007520 309 KQEERGR|DH 0.113 . NCLIV_007520 325 VETLWEK|WA 0.067 . ____________________________^_________________

  • Fasta :-

    >NCLIV_007520 ATGCTCTCGGACGATCACGCCTGCTCGCCCCGCAACTTTTTCCCCGGGCGCATCTTCAAC GACCACTCGCGCAACTTGAACTTGTACGGCGCCGGCGACGCCCAGGGCGAGGCTTCGACG GACAGCGTCGAGGTCGACTACCGCGGCGACGAGGTTCAAGTCGCGACCCTTCTGCAGCTG CTTGCGGGCCGACACAATCCGGCGACGCCGCGCGGGAAGCGTCTCCTGACCGACGCCAAC AGCAACGTGCTGCTCTACCTGTCGGGGCACGGCGGCGACGGCTTTCTCAAGTTCCAGGAC TGGGAAGAGATCTCCAGCGTCGACCTCGCGGACGCAGTCGCGCAGATGAAGGCGCAGCGT CGGTTTCGACAGATGCTTCTGATTGCCGAGACGTGCCAAGGCAGCACCCTGCTGGATGCG ATCACGACGCCGGGTGTCCTCGGCCTCGCCTCGTCGGGGCCGAAGGAGAGTAGCTACTCG CACCACGCTGACGGGTTCCTCGGCGTGGCTGTGATTGACCGGTGGACGTACTACACGTTG CAGTTCTTCGAGAAGTCCGTGAAAGACTCCAGTTCCCCGGCAACCTTCCAGCAACTCCTC GACAGCTACTCCCGGAAACAACTGATGTCGACCGCCTCCGCCCGGACAGAGCTCTTCGAC AAATCCCTGGCGGACACGAAACTCACCGAGTTCTTCGCCGCAGCGTCCACCCTCCACGCC ACCGACAGCATGTACCCGCTGCGCCCGCGAGCGGCGACAACGGGGAAGAAGGAGAAGGGA ACGGGAGAGAACGAAGCGCGGGTCAGACGCGCCGGCGTGAGCGTCGGGACGTACTACGCG AGGCATTTTGCCCTCGTGCGCGAAGAGGAAGGCGAGATGGGCGAGGAGGAAGGCGCGAGG GACAGGAAGCAAGAAGAGCGGGGAAGAGACCACGAAGGCGCGACGACAGAGACAGTGGAG ACACTCTGGGAGAAGTGGGCACCCCACGGCGATGTACACCCGGCAGCAGTAGCAGGGTTG ATTCTCCTCGCCATGGGAACTGCTGGAGCGACTTCGGTTCTGCTCTAG
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  • Fasta :-

    MLSDDHACSPRNFFPGRIFNDHSRNLNLYGAGDAQGEASTDSVEVDYRGDEVQVATLLQL LAGRHNPATPRGKRLLTDANSNVLLYLSGHGGDGFLKFQDWEEISSVDLADAVAQMKAQR RFRQMLLIAETCQGSTLLDAITTPGVLGLASSGPKESSYSHHADGFLGVAVIDRWTYYTL QFFEKSVKDSSSPATFQQLLDSYSRKQLMSTASARTELFDKSLADTKLTEFFAAASTLHA TDSMYPLRPRAATTGKKEKGTGENEARVRRAGVSVGTYYARHFALVREEEGEMGEEEGAR DRKQEERGRDHEGATTETVETLWEKWAPHGDVHPAAVAGLILLAMGTAGATSVLL

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
NCLIV_007520186 SFFEKSVKDS0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India