NCLIV_018240 | Similar to uniprot|P38747 Saccharomyces cerevisiae YHL013c, related

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_018240OTHER1.0000000.0000000.000000
No Results

  • Fasta :-

    >NCLIV_018240 MEANGAATSWGPVGDGSGSDGEEGGSRRKLLQKHRKEIKDLQAASKRALAAAKGKGAKQQ LEREIRQKEADLLADHQRQLAALSRSGGREEAAKDSNDQRNEQAEVGSAMASVNGSSSAA CRSGDKTGASDASVSASPGESADAVVNTFASLRLYGGDDGPREPARLSKAQQRRRKKRAE EEAREEALRLEREEAGPDPGQVEWEALRRHLASLNLAIHSIAADGHCMYRAICHQMQRIC SQGVNPAASVETLRLKVADFLEEHREDFQLFLDDAAQTQEGFEDYCEKIRSTAEWGGEVE LQVISKVLQRRIELASMNDGEFLILNYGEDCAADATPLRLAFHRHLLAAGGHYNSVVPAA CATPDSAVEVGCDTE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_018240.fa Sequence name : NCLIV_018240 Sequence length : 375 VALUES OF COMPUTED PARAMETERS Coef20 : 2.881 CoefTot : 0.000 ChDiff : -13 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.865 0.994 0.110 0.457 MesoH : -0.940 0.202 -0.407 0.159 MuHd_075 : 5.309 4.223 2.064 0.602 MuHd_095 : 9.436 6.944 1.861 2.363 MuHd_100 : 10.683 9.519 2.726 2.628 MuHd_105 : 16.204 12.145 3.779 2.955 Hmax_075 : 8.400 4.300 0.762 2.710 Hmax_095 : 8.925 1.750 0.354 2.949 Hmax_100 : 10.900 7.500 0.688 4.070 Hmax_105 : 11.550 9.217 0.688 4.188 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9831 0.0169 DFMC : 0.9730 0.0270
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 375 NCLIV_018240 MEANGAATSWGPVGDGSGSDGEEGGSRRKLLQKHRKEIKDLQAASKRALAAAKGKGAKQQLEREIRQKEADLLADHQRQL 80 AALSRSGGREEAAKDSNDQRNEQAEVGSAMASVNGSSSAACRSGDKTGASDASVSASPGESADAVVNTFASLRLYGGDDG 160 PREPARLSKAQQRRRKKRAEEEAREEALRLEREEAGPDPGQVEWEALRRHLASLNLAIHSIAADGHCMYRAICHQMQRIC 240 SQGVNPAASVETLRLKVADFLEEHREDFQLFLDDAAQTQEGFEDYCEKIRSTAEWGGEVELQVISKVLQRRIELASMNDG 320 EFLILNYGEDCAADATPLRLAFHRHLLAAGGHYNSVVPAACATPDSAVEVGCDTE 400 ................................................................................ 80 ................................................................................ 160 .................P.............................................................. 240 ................................................................................ 320 ....................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_018240 27 GEEGGSR|RK 0.065 . NCLIV_018240 28 EEGGSRR|KL 0.137 . NCLIV_018240 29 EGGSRRK|LL 0.076 . NCLIV_018240 33 RRKLLQK|HR 0.066 . NCLIV_018240 35 KLLQKHR|KE 0.086 . NCLIV_018240 36 LLQKHRK|EI 0.129 . NCLIV_018240 39 KHRKEIK|DL 0.081 . NCLIV_018240 46 DLQAASK|RA 0.069 . NCLIV_018240 47 LQAASKR|AL 0.213 . NCLIV_018240 53 RALAAAK|GK 0.087 . NCLIV_018240 55 LAAAKGK|GA 0.112 . NCLIV_018240 58 AKGKGAK|QQ 0.062 . NCLIV_018240 63 AKQQLER|EI 0.135 . NCLIV_018240 66 QLEREIR|QK 0.236 . NCLIV_018240 68 EREIRQK|EA 0.074 . NCLIV_018240 78 LLADHQR|QL 0.106 . NCLIV_018240 85 QLAALSR|SG 0.172 . NCLIV_018240 89 LSRSGGR|EE 0.076 . NCLIV_018240 94 GREEAAK|DS 0.099 . NCLIV_018240 100 KDSNDQR|NE 0.107 . NCLIV_018240 122 SSSAACR|SG 0.242 . NCLIV_018240 126 ACRSGDK|TG 0.053 . NCLIV_018240 153 NTFASLR|LY 0.078 . NCLIV_018240 162 GGDDGPR|EP 0.065 . NCLIV_018240 166 GPREPAR|LS 0.141 . NCLIV_018240 169 EPARLSK|AQ 0.117 . NCLIV_018240 173 LSKAQQR|RR 0.080 . NCLIV_018240 174 SKAQQRR|RK 0.200 . NCLIV_018240 175 KAQQRRR|KK 0.199 . NCLIV_018240 176 AQQRRRK|KR 0.217 . NCLIV_018240 177 QQRRRKK|RA 0.447 . NCLIV_018240 178 QRRRKKR|AE 0.825 *ProP* NCLIV_018240 184 RAEEEAR|EE 0.075 . NCLIV_018240 189 AREEALR|LE 0.072 . NCLIV_018240 192 EALRLER|EE 0.120 . NCLIV_018240 208 VEWEALR|RH 0.067 . NCLIV_018240 209 EWEALRR|HL 0.101 . NCLIV_018240 230 DGHCMYR|AI 0.125 . NCLIV_018240 238 ICHQMQR|IC 0.114 . NCLIV_018240 254 ASVETLR|LK 0.073 . NCLIV_018240 256 VETLRLK|VA 0.062 . NCLIV_018240 265 DFLEEHR|ED 0.069 . NCLIV_018240 288 FEDYCEK|IR 0.072 . NCLIV_018240 290 DYCEKIR|ST 0.118 . NCLIV_018240 306 ELQVISK|VL 0.061 . NCLIV_018240 310 ISKVLQR|RI 0.085 . NCLIV_018240 311 SKVLQRR|IE 0.133 . NCLIV_018240 339 ADATPLR|LA 0.081 . NCLIV_018240 344 LRLAFHR|HL 0.126 . ____________________________^_________________

  • Fasta :-

    >NCLIV_018240 ATGGAGGCGAACGGGGCCGCAACGTCATGGGGCCCTGTGGGCGACGGCTCAGGGAGCGAC GGCGAAGAAGGAGGAAGTCGACGGAAGCTGCTTCAGAAACACAGAAAGGAGATTAAGGAT CTCCAAGCAGCCAGCAAGCGCGCGCTCGCCGCGGCGAAGGGGAAGGGGGCGAAGCAGCAG CTGGAGCGCGAGATCCGGCAGAAGGAAGCGGACCTCCTCGCAGATCACCAGAGACAGCTT GCGGCTCTGTCCAGAAGCGGAGGGAGGGAAGAGGCTGCCAAAGATTCGAACGACCAGAGG AACGAGCAGGCGGAGGTCGGGAGCGCCATGGCCTCTGTGAACGGATCTTCCTCCGCCGCA TGTCGCTCCGGAGACAAGACAGGCGCGTCGGATGCGAGTGTCTCCGCATCGCCAGGCGAG AGCGCGGACGCGGTTGTCAACACCTTCGCGTCGCTGCGGCTCTACGGCGGAGACGACGGG CCCCGGGAGCCTGCCAGGCTGTCCAAGGCGCAGCAGCGAAGAAGGAAGAAACGCGCGGAA GAGGAGGCACGCGAAGAGGCGCTTCGGCTCGAACGAGAAGAGGCTGGCCCAGATCCGGGC CAGGTGGAGTGGGAGGCGCTCCGACGCCACCTGGCAAGTCTCAATCTCGCGATTCACTCG ATCGCGGCGGACGGCCACTGTATGTACAGAGCGATCTGCCACCAAATGCAGAGGATTTGT TCGCAAGGAGTCAACCCGGCTGCTTCCGTTGAGACTCTGCGACTCAAAGTTGCGGACTTT CTGGAAGAGCATCGCGAGGATTTTCAGCTCTTCCTCGACGATGCCGCTCAAACCCAGGAA GGCTTCGAGGATTACTGCGAGAAGATCCGCAGCACTGCGGAGTGGGGCGGCGAAGTCGAG CTGCAGGTGATCTCGAAGGTGCTCCAGCGACGCATTGAACTCGCCTCGATGAATGACGGA GAATTCCTCATCCTCAATTACGGCGAGGATTGCGCGGCAGATGCGACGCCCCTTCGCCTC GCATTCCACCGCCATCTGTTGGCCGCAGGCGGGCACTACAACTCCGTCGTGCCGGCTGCG TGTGCGACGCCTGACTCTGCAGTCGAAGTTGGATGTGACACCGAATAA
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  • Fasta :-

    MEANGAATSWGPVGDGSGSDGEEGGSRRKLLQKHRKEIKDLQAASKRALAAAKGKGAKQQ LEREIRQKEADLLADHQRQLAALSRSGGREEAAKDSNDQRNEQAEVGSAMASVNGSSSAA CRSGDKTGASDASVSASPGESADAVVNTFASLRLYGGDDGPREPARLSKAQQRRRKKRAE EEAREEALRLEREEAGPDPGQVEWEALRRHLASLNLAIHSIAADGHCMYRAICHQMQRIC SQGVNPAASVETLRLKVADFLEEHREDFQLFLDDAAQTQEGFEDYCEKIRSTAEWGGEVE LQVISKVLQRRIELASMNDGEFLILNYGEDCAADATPLRLAFHRHLLAAGGHYNSVVPAA CATPDSAVEVGCDTE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_018240316 SIELASMNDG0.994unspNCLIV_018240316 SIELASMNDG0.994unspNCLIV_018240316 SIELASMNDG0.994unspNCLIV_01824017 SVGDGSGSDG0.996unspNCLIV_018240137 SSVSASPGES0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India