NCLIV_019450 | hypothetical protein

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006465      

  • Computed_GO_Processes:  signal peptide processing      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_019450OTHER0.9999470.0000150.000038
No Results

  • Fasta :-

    >NCLIV_019450 MKKRQGKVVDTATPPPQGDEIKKENKLACFLRTCNAAMPTCVQQLIQAVGDELRSVYRRP REALLSVVNLLCVLFTALMLWRVLVVFSNSPSPVVVVLSGSMEPALQRGDILFLVDRGPE LKAGDIVVFKVDGREIPIVHRVLSLHENKEGEMAMLTKGDNNSVDDRGLYAEKQLWLNRT NVVGSTVTFLPYAGMVTIVLNDYPVVKWCAIGGMLLLAFLGYE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_019450.fa Sequence name : NCLIV_019450 Sequence length : 223 VALUES OF COMPUTED PARAMETERS Coef20 : 2.726 CoefTot : -0.609 ChDiff : 2 ZoneTo : 9 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.065 2.541 0.410 0.749 MesoH : 0.010 1.044 -0.139 0.360 MuHd_075 : 8.539 5.352 3.737 1.828 MuHd_095 : 22.672 15.908 6.306 3.864 MuHd_100 : 26.455 17.137 7.191 4.903 MuHd_105 : 26.810 15.996 7.057 5.447 Hmax_075 : -5.950 1.400 -1.961 0.292 Hmax_095 : 2.625 2.500 -2.027 1.601 Hmax_100 : 5.700 5.400 -0.871 2.850 Hmax_105 : -2.900 3.100 -2.779 1.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9938 0.0062 DFMC : 0.9825 0.0175
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 223 NCLIV_019450 MKKRQGKVVDTATPPPQGDEIKKENKLACFLRTCNAAMPTCVQQLIQAVGDELRSVYRRPREALLSVVNLLCVLFTALML 80 WRVLVVFSNSPSPVVVVLSGSMEPALQRGDILFLVDRGPELKAGDIVVFKVDGREIPIVHRVLSLHENKEGEMAMLTKGD 160 NNSVDDRGLYAEKQLWLNRTNVVGSTVTFLPYAGMVTIVLNDYPVVKWCAIGGMLLLAFLGYE 240 ................................................................................ 80 ................................................................................ 160 ............................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_019450 2 -----MK|KR 0.062 . NCLIV_019450 3 ----MKK|RQ 0.133 . NCLIV_019450 4 ---MKKR|QG 0.198 . NCLIV_019450 7 MKKRQGK|VV 0.368 . NCLIV_019450 22 PQGDEIK|KE 0.059 . NCLIV_019450 23 QGDEIKK|EN 0.075 . NCLIV_019450 26 EIKKENK|LA 0.063 . NCLIV_019450 32 KLACFLR|TC 0.129 . NCLIV_019450 54 AVGDELR|SV 0.135 . NCLIV_019450 58 ELRSVYR|RP 0.088 . NCLIV_019450 59 LRSVYRR|PR 0.242 . NCLIV_019450 61 SVYRRPR|EA 0.242 . NCLIV_019450 82 TALMLWR|VL 0.071 . NCLIV_019450 108 MEPALQR|GD 0.077 . NCLIV_019450 117 ILFLVDR|GP 0.081 . NCLIV_019450 122 DRGPELK|AG 0.067 . NCLIV_019450 130 GDIVVFK|VD 0.074 . NCLIV_019450 134 VFKVDGR|EI 0.082 . NCLIV_019450 141 EIPIVHR|VL 0.082 . NCLIV_019450 149 LSLHENK|EG 0.064 . NCLIV_019450 158 EMAMLTK|GD 0.071 . NCLIV_019450 167 NNSVDDR|GL 0.127 . NCLIV_019450 173 RGLYAEK|QL 0.060 . NCLIV_019450 179 KQLWLNR|TN 0.071 . NCLIV_019450 207 NDYPVVK|WC 0.071 . ____________________________^_________________

  • Fasta :-

    >NCLIV_019450 ATGAAGAAGCGCCAGGGAAAAGTCGTAGACACCGCCACTCCTCCCCCTCAAGGGGACGAG ATCAAGAAAGAGAACAAACTCGCCTGTTTTCTTCGCACTTGCAATGCTGCAATGCCCACT TGTGTCCAGCAACTCATCCAAGCGGTTGGGGATGAGCTACGTTCGGTGTACAGACGCCCG CGCGAGGCTCTCTTGTCTGTAGTCAATCTTCTCTGCGTCCTCTTCACCGCTCTCATGCTT TGGAGAGTCCTCGTCGTCTTCTCCAACTCTCCTTCTCCTGTAGTCGTGGTCCTCAGTGGG TCCATGGAGCCTGCCTTGCAAAGAGGAGACATTCTCTTCCTCGTGGACCGTGGCCCAGAA CTCAAAGCAGGTGACATCGTTGTCTTCAAGGTCGACGGCCGGGAGATTCCAATTGTGCAT CGAGTGCTCTCTCTGCATGAAAATAAAGAAGGCGAAATGGCTATGCTGACGAAAGGCGAC AACAACTCTGTCGACGATCGGGGTCTGTATGCAGAGAAGCAGCTGTGGCTGAACCGGACG AACGTGGTAGGTTCAACAGTCACATTCCTCCCGTACGCGGGCATGGTGACGATCGTACTG AACGACTACCCTGTCGTAAAGTGGTGTGCGATCGGGGGTATGCTCCTTCTCGCCTTTCTG GGCTATGAATAA
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  • Fasta :-

    MKKRQGKVVDTATPPPQGDEIKKENKLACFLRTCNAAMPTCVQQLIQAVGDELRSVYRRP REALLSVVNLLCVLFTALMLWRVLVVFSNSPSPVVVVLSGSMEPALQRGDILFLVDRGPE LKAGDIVVFKVDGREIPIVHRVLSLHENKEGEMAMLTKGDNNSVDDRGLYAEKQLWLNRT NVVGSTVTFLPYAGMVTIVLNDYPVVKWCAIGGMLLLAFLGYE

  • title: Catalytic site
  • coordinates: S101,H140
No Results
No Results
IDSitePeptideScoreMethod
NCLIV_019450144 SHRVLSLHEN0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India