NCLIV_022600 | putative glycoprotease family domain-containing protein

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_022600OTHER0.9918620.0034180.004720
No Results

  • Fasta :-

    >NCLIV_022600 MAALGAVGPVLESTAHSSVQYPASGSLLCLGIESSANKVGVGIVSSNGEILSNPRETFIT PPGTGFLPRETALHHQSKIVGLVRRALAEAHVEPKQLHCIAYTCGPGMGGPLAVGAITAR TLSLLWNIPLVAVNHCVAHIEMGRLVTGCSNPVVLYVSGGNTQVIGYADGRYRILGETLD VAVGNCIDRLARLLHLPNDPAPGYQVEQLARRFAERRRQKLSPGDHSTTAHSACDPHIED PAQGRMEQSQAELTEELLPLPYTVKGMDLSFSGILSRLEDIAGTMRRYEKFRNDTCRDSA GERGADAGSISGDGNEGSQKPAHVSIHDTEQSCEVSNDEKLGKGEARTCDVGPNEGASSG VPSVSTTANGVPAGSRYDGVEAPTCKQRGSDGKAAEKQRRRSEGKASTEMPQLHTCPQDL QESQVNQKLRQGKCAGKLKLNGRREYQNGEMFEDLPTRLLTPESLCFSAQEIIFAMLSEV TERAMALHYADQVLVVGGVGCNLRLQEMLKEMAIRRGASMGGMDDRYCIDNGAMVAYLGC LMASRGQFVDVSKAQYRQRFRTDEVPVLWREDEDQSLDVAEMRGKS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_022600.fa Sequence name : NCLIV_022600 Sequence length : 586 VALUES OF COMPUTED PARAMETERS Coef20 : 3.847 CoefTot : -1.190 ChDiff : -9 ZoneTo : 48 KR : 1 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.512 1.465 0.354 0.559 MesoH : 0.470 0.790 -0.029 0.372 MuHd_075 : 27.732 17.513 8.420 4.131 MuHd_095 : 21.610 23.988 7.770 5.615 MuHd_100 : 20.373 20.655 7.319 4.498 MuHd_105 : 17.681 16.103 5.812 3.180 Hmax_075 : 14.350 12.600 3.264 5.297 Hmax_095 : 13.825 16.188 2.855 6.554 Hmax_100 : 14.200 16.600 2.996 6.390 Hmax_105 : 14.400 16.300 2.753 4.430 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9800 0.0200 DFMC : 0.9749 0.0251
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 586 NCLIV_022600 MAALGAVGPVLESTAHSSVQYPASGSLLCLGIESSANKVGVGIVSSNGEILSNPRETFITPPGTGFLPRETALHHQSKIV 80 GLVRRALAEAHVEPKQLHCIAYTCGPGMGGPLAVGAITARTLSLLWNIPLVAVNHCVAHIEMGRLVTGCSNPVVLYVSGG 160 NTQVIGYADGRYRILGETLDVAVGNCIDRLARLLHLPNDPAPGYQVEQLARRFAERRRQKLSPGDHSTTAHSACDPHIED 240 PAQGRMEQSQAELTEELLPLPYTVKGMDLSFSGILSRLEDIAGTMRRYEKFRNDTCRDSAGERGADAGSISGDGNEGSQK 320 PAHVSIHDTEQSCEVSNDEKLGKGEARTCDVGPNEGASSGVPSVSTTANGVPAGSRYDGVEAPTCKQRGSDGKAAEKQRR 400 RSEGKASTEMPQLHTCPQDLQESQVNQKLRQGKCAGKLKLNGRREYQNGEMFEDLPTRLLTPESLCFSAQEIIFAMLSEV 480 TERAMALHYADQVLVVGGVGCNLRLQEMLKEMAIRRGASMGGMDDRYCIDNGAMVAYLGCLMASRGQFVDVSKAQYRQRF 560 RTDEVPVLWREDEDQSLDVAEMRGKS 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .......................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_022600 38 IESSANK|VG 0.061 . NCLIV_022600 55 EILSNPR|ET 0.080 . NCLIV_022600 69 GTGFLPR|ET 0.097 . NCLIV_022600 78 ALHHQSK|IV 0.122 . NCLIV_022600 84 KIVGLVR|RA 0.085 . NCLIV_022600 85 IVGLVRR|AL 0.151 . NCLIV_022600 95 EAHVEPK|QL 0.078 . NCLIV_022600 120 VGAITAR|TL 0.086 . NCLIV_022600 144 AHIEMGR|LV 0.088 . NCLIV_022600 171 IGYADGR|YR 0.086 . NCLIV_022600 173 YADGRYR|IL 0.108 . NCLIV_022600 189 VGNCIDR|LA 0.074 . NCLIV_022600 192 CIDRLAR|LL 0.139 . NCLIV_022600 211 QVEQLAR|RF 0.080 . NCLIV_022600 212 VEQLARR|FA 0.161 . NCLIV_022600 216 ARRFAER|RR 0.084 . NCLIV_022600 217 RRFAERR|RQ 0.115 . NCLIV_022600 218 RFAERRR|QK 0.117 . NCLIV_022600 220 AERRRQK|LS 0.112 . NCLIV_022600 245 EDPAQGR|ME 0.080 . NCLIV_022600 265 PLPYTVK|GM 0.063 . NCLIV_022600 277 FSGILSR|LE 0.092 . NCLIV_022600 286 DIAGTMR|RY 0.087 . NCLIV_022600 287 IAGTMRR|YE 0.124 . NCLIV_022600 290 TMRRYEK|FR 0.153 . NCLIV_022600 292 RRYEKFR|ND 0.101 . NCLIV_022600 297 FRNDTCR|DS 0.181 . NCLIV_022600 303 RDSAGER|GA 0.158 . NCLIV_022600 320 GNEGSQK|PA 0.084 . NCLIV_022600 340 EVSNDEK|LG 0.060 . NCLIV_022600 343 NDEKLGK|GE 0.060 . NCLIV_022600 347 LGKGEAR|TC 0.121 . NCLIV_022600 376 GVPAGSR|YD 0.097 . NCLIV_022600 386 VEAPTCK|QR 0.068 . NCLIV_022600 388 APTCKQR|GS 0.126 . NCLIV_022600 393 QRGSDGK|AA 0.110 . NCLIV_022600 397 DGKAAEK|QR 0.060 . NCLIV_022600 399 KAAEKQR|RR 0.113 . NCLIV_022600 400 AAEKQRR|RS 0.172 . NCLIV_022600 401 AEKQRRR|SE 0.282 . NCLIV_022600 405 RRRSEGK|AS 0.080 . NCLIV_022600 428 ESQVNQK|LR 0.058 . NCLIV_022600 430 QVNQKLR|QG 0.117 . NCLIV_022600 433 QKLRQGK|CA 0.241 . NCLIV_022600 437 QGKCAGK|LK 0.059 . NCLIV_022600 439 KCAGKLK|LN 0.078 . NCLIV_022600 443 KLKLNGR|RE 0.096 . NCLIV_022600 444 LKLNGRR|EY 0.139 . NCLIV_022600 458 FEDLPTR|LL 0.076 . NCLIV_022600 483 LSEVTER|AM 0.078 . NCLIV_022600 504 GVGCNLR|LQ 0.079 . NCLIV_022600 510 RLQEMLK|EM 0.060 . NCLIV_022600 515 LKEMAIR|RG 0.087 . NCLIV_022600 516 KEMAIRR|GA 0.299 . NCLIV_022600 526 MGGMDDR|YC 0.130 . NCLIV_022600 545 GCLMASR|GQ 0.075 . NCLIV_022600 553 QFVDVSK|AQ 0.064 . NCLIV_022600 557 VSKAQYR|QR 0.086 . NCLIV_022600 559 KAQYRQR|FR 0.132 . NCLIV_022600 561 QYRQRFR|TD 0.078 . NCLIV_022600 570 EVPVLWR|ED 0.080 . NCLIV_022600 583 LDVAEMR|GK 0.110 . NCLIV_022600 585 VAEMRGK|S- 0.080 . ____________________________^_________________

  • Fasta :-

    >NCLIV_022600 ATGGCTGCGCTTGGAGCTGTTGGTCCTGTGCTTGAAAGCACGGCACATTCTTCTGTCCAG TATCCGGCGTCTGGGTCTCTGTTGTGCCTGGGAATTGAGAGCAGCGCGAACAAAGTCGGC GTGGGAATTGTTTCATCAAATGGCGAAATATTGTCAAACCCACGGGAGACTTTTATCACT CCCCCCGGCACCGGGTTTTTGCCTCGAGAAACGGCGTTACATCATCAAAGCAAGATCGTG GGACTAGTCAGGAGAGCCCTTGCCGAGGCACATGTGGAGCCAAAACAGCTGCATTGCATC GCTTATACGTGTGGACCGGGCATGGGTGGTCCATTGGCAGTCGGCGCCATCACAGCACGA ACCTTGTCCCTTCTCTGGAATATCCCTCTAGTGGCTGTAAACCACTGCGTTGCACACATC GAGATGGGGCGCCTCGTAACAGGGTGCAGCAATCCTGTCGTCCTTTATGTTAGCGGAGGG AACACACAGGTGATTGGTTATGCGGACGGACGCTACCGTATACTGGGAGAGACCCTAGAT GTCGCAGTAGGCAATTGCATCGATCGCCTTGCGCGTCTTCTTCACCTTCCCAATGATCCT GCTCCGGGATACCAAGTGGAGCAACTAGCTCGTCGTTTTGCTGAGAGGAGGAGGCAAAAG TTGTCCCCTGGGGATCATTCTACAACGGCACACAGCGCCTGCGATCCTCATATCGAGGAT CCTGCTCAGGGACGAATGGAACAATCACAAGCAGAGCTTACAGAAGAGCTGCTTCCTCTC CCTTATACTGTGAAGGGCATGGATCTTTCTTTCAGTGGCATTCTTAGTCGGCTGGAAGAC ATCGCAGGGACAATGAGACGGTACGAGAAATTCAGGAACGACACGTGCCGAGATAGCGCT GGTGAACGAGGGGCAGATGCCGGCTCAATTTCAGGGGATGGCAATGAAGGATCGCAGAAA CCGGCGCACGTTAGCATACATGACACAGAACAGTCATGCGAGGTCTCAAACGATGAGAAA CTGGGGAAGGGTGAAGCAAGAACCTGCGACGTGGGGCCAAATGAAGGTGCATCTTCAGGG GTTCCGTCGGTCTCAACTACTGCCAATGGCGTGCCCGCTGGATCCAGATACGATGGCGTC GAGGCACCCACATGCAAACAACGGGGATCAGATGGGAAGGCAGCAGAGAAGCAGCGACGT CGATCAGAGGGAAAGGCAAGCACGGAGATGCCACAGCTTCACACATGCCCGCAGGACCTG CAGGAAAGCCAGGTTAATCAAAAACTGCGGCAGGGTAAATGTGCCGGTAAACTGAAACTA AATGGCAGAAGAGAGTATCAAAACGGAGAGATGTTCGAGGATTTGCCTACGCGCCTTTTA ACGCCTGAAAGTCTTTGTTTTAGCGCACAGGAAATTATTTTCGCGATGCTAAGTGAGGTT ACGGAGCGCGCTATGGCTCTCCACTACGCTGACCAAGTTTTGGTTGTCGGCGGCGTAGGT TGCAATTTACGCCTGCAAGAAATGCTGAAGGAGATGGCGATAAGGCGGGGTGCTTCGATG GGCGGCATGGACGACCGTTACTGCATTGACAACGGAGCAATGGTCGCATATCTCGGCTGT CTGATGGCCTCTAGGGGCCAGTTTGTCGATGTCAGCAAAGCGCAATACCGCCAGCGCTTT CGCACCGACGAGGTGCCTGTTTTGTGGCGCGAGGACGAAGATCAATCACTCGATGTTGCC GAGATGCGGGGTAAAAGCTAA
  • Download Fasta

  • Fasta :-

    MAALGAVGPVLESTAHSSVQYPASGSLLCLGIESSANKVGVGIVSSNGEILSNPRETFIT PPGTGFLPRETALHHQSKIVGLVRRALAEAHVEPKQLHCIAYTCGPGMGGPLAVGAITAR TLSLLWNIPLVAVNHCVAHIEMGRLVTGCSNPVVLYVSGGNTQVIGYADGRYRILGETLD VAVGNCIDRLARLLHLPNDPAPGYQVEQLARRFAERRRQKLSPGDHSTTAHSACDPHIED PAQGRMEQSQAELTEELLPLPYTVKGMDLSFSGILSRLEDIAGTMRRYEKFRNDTCRDSA GERGADAGSISGDGNEGSQKPAHVSIHDTEQSCEVSNDEKLGKGEARTCDVGPNEGASSG VPSVSTTANGVPAGSRYDGVEAPTCKQRGSDGKAAEKQRRRSEGKASTEMPQLHTCPQDL QESQVNQKLRQGKCAGKLKLNGRREYQNGEMFEDLPTRLLTPESLCFSAQEIIFAMLSEV TERAMALHYADQVLVVGGVGCNLRLQEMLKEMAIRRGASMGGMDDRYCIDNGAMVAYLGC LMASRGQFVDVSKAQYRQRFRTDEVPVLWREDEDQSLDVAEMRGKS

    No Results
  • title: nucleotide binding site
  • coordinates: E33,S34,S35,A36,K38,G40,H135,Y156,V157,S158,G159
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_022600299 STCRDSAGER0.993unspNCLIV_022600299 STCRDSAGER0.993unspNCLIV_022600299 STCRDSAGER0.993unspNCLIV_022600325 SPAHVSIHDT0.991unspNCLIV_022600375 SVPAGSRYDG0.996unspNCLIV_022600402 SQRRRSEGKA0.998unspNCLIV_022600519 SRRGASMGGM0.993unspNCLIV_022600222 SRQKLSPGDH0.998unspNCLIV_022600232 STTAHSACDP0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India