NCLIV_0234 | glutamine amidotransferase, SNO family domain-containing protein

_IDPredictionOTHERSPmTPCS_Position
NCLIV_0234OTHER0.9928340.0065700.000597
No Results

  • Fasta :-

    >NCLIV_0234 MGEENAVSVGVLALQGAFFDHIKAFQRLGLGSRLRLVLVKKPADLEALDALVIPGGESTA MRIIAGEQMMSALKAFVHEKKKPVWGTCAGCILLSDAVCTLEASPSSSPSMRFREKESDD GYGDFIGGAAVRTCRNFFGRQADSFEAPLRLAGRLQTAANGLSAICIRAPAILEVSSPEV EILGYIDMPQRNCSVIAAAAHGPVLLTIFHTELTDDTRLHAFFLEQFVFPSLAAGPRSKQ LACGTETPAEKMQRDSGSAFAHIARDGDRPPHHLGNRCA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_0234.fa Sequence name : NCLIV_0234 Sequence length : 279 VALUES OF COMPUTED PARAMETERS Coef20 : 3.484 CoefTot : -0.250 ChDiff : -2 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.688 1.812 0.380 0.655 MesoH : -0.223 0.634 -0.228 0.295 MuHd_075 : 13.233 8.980 4.080 2.755 MuHd_095 : 15.255 9.085 4.378 3.411 MuHd_100 : 8.349 6.858 3.554 2.398 MuHd_105 : 1.274 5.668 2.103 1.390 Hmax_075 : 14.525 15.000 2.919 5.500 Hmax_095 : 13.912 13.475 2.531 5.443 Hmax_100 : 10.400 12.900 2.002 4.860 Hmax_105 : 12.367 15.200 2.564 5.133 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9854 0.0146 DFMC : 0.9873 0.0127
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 279 NCLIV_0234 MGEENAVSVGVLALQGAFFDHIKAFQRLGLGSRLRLVLVKKPADLEALDALVIPGGESTAMRIIAGEQMMSALKAFVHEK 80 KKPVWGTCAGCILLSDAVCTLEASPSSSPSMRFREKESDDGYGDFIGGAAVRTCRNFFGRQADSFEAPLRLAGRLQTAAN 160 GLSAICIRAPAILEVSSPEVEILGYIDMPQRNCSVIAAAAHGPVLLTIFHTELTDDTRLHAFFLEQFVFPSLAAGPRSKQ 240 LACGTETPAEKMQRDSGSAFAHIARDGDRPPHHLGNRCA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_0234 23 AFFDHIK|AF 0.064 . NCLIV_0234 27 HIKAFQR|LG 0.073 . NCLIV_0234 33 RLGLGSR|LR 0.062 . NCLIV_0234 35 GLGSRLR|LV 0.101 . NCLIV_0234 40 LRLVLVK|KP 0.063 . NCLIV_0234 41 RLVLVKK|PA 0.105 . NCLIV_0234 62 GESTAMR|II 0.188 . NCLIV_0234 74 QMMSALK|AF 0.058 . NCLIV_0234 80 KAFVHEK|KK 0.065 . NCLIV_0234 81 AFVHEKK|KP 0.088 . NCLIV_0234 82 FVHEKKK|PV 0.139 . NCLIV_0234 112 SSSPSMR|FR 0.193 . NCLIV_0234 114 SPSMRFR|EK 0.133 . NCLIV_0234 116 SMRFREK|ES 0.089 . NCLIV_0234 132 IGGAAVR|TC 0.076 . NCLIV_0234 135 AAVRTCR|NF 0.211 . NCLIV_0234 140 CRNFFGR|QA 0.209 . NCLIV_0234 150 SFEAPLR|LA 0.122 . NCLIV_0234 154 PLRLAGR|LQ 0.090 . NCLIV_0234 168 LSAICIR|AP 0.100 . NCLIV_0234 191 YIDMPQR|NC 0.080 . NCLIV_0234 218 ELTDDTR|LH 0.073 . NCLIV_0234 237 SLAAGPR|SK 0.128 . NCLIV_0234 239 AAGPRSK|QL 0.072 . NCLIV_0234 251 TETPAEK|MQ 0.068 . NCLIV_0234 254 PAEKMQR|DS 0.160 . NCLIV_0234 265 AFAHIAR|DG 0.117 . NCLIV_0234 269 IARDGDR|PP 0.087 . NCLIV_0234 277 PHHLGNR|CA 0.106 . ____________________________^_________________

  • Fasta :-

    >NCLIV_0234 ATGGGAGAAGAAAACGCCGTTTCCGTGGGTGTCCTCGCCCTCCAGGGCGCCTTCTTTGAC CACATCAAGGCCTTCCAGCGCCTGGGTCTAGGCTCGCGTCTCCGTCTCGTTCTCGTGAAG AAACCTGCAGACTTGGAGGCGCTCGACGCTCTGGTCATTCCAGGGGGCGAGTCGACTGCC ATGCGCATCATCGCAGGAGAGCAAATGATGAGTGCTCTCAAGGCTTTCGTCCATGAAAAG AAGAAGCCGGTCTGGGGGACCTGTGCAGGCTGCATCCTGCTCTCAGACGCAGTGTGCACC CTCGAGGCGTCTCCGTCTTCTTCTCCTTCGATGAGGTTTCGGGAGAAGGAGAGCGACGAT GGGTACGGAGACTTCATCGGCGGCGCCGCAGTGCGAACGTGCCGGAATTTTTTCGGAAGG CAGGCGGACAGCTTCGAGGCGCCTTTGCGACTTGCCGGGAGGCTCCAGACCGCGGCGAAT GGCCTGTCGGCGATCTGCATTCGCGCGCCAGCCATCCTCGAAGTTTCGTCGCCTGAGGTT GAAATTCTCGGGTATATCGACATGCCCCAGCGGAACTGCAGCGTCATCGCAGCGGCGGCG CACGGTCCCGTCCTCCTCACGATCTTCCATACAGAGCTGACTGACGACACGCGCCTGCAT GCGTTCTTCCTCGAGCAGTTTGTCTTTCCTTCTCTCGCTGCTGGGCCTCGCTCCAAGCAG CTCGCGTGTGGAACGGAGACGCCTGCCGAGAAAATGCAGAGAGACTCTGGGTCCGCCTTT GCCCACATAGCCAGGGACGGCGACCGTCCTCCTCACCACTTGGGAAACCGCTGCGCCTAA
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  • Fasta :-

    MGEENAVSVGVLALQGAFFDHIKAFQRLGLGSRLRLVLVKKPADLEALDALVIPGGESTA MRIIAGEQMMSALKAFVHEKKKPVWGTCAGCILLSDAVCTLEASPSSSPSMRFREKESDD GYGDFIGGAAVRTCRNFFGRQADSFEAPLRLAGRLQTAANGLSAICIRAPAILEVSSPEV EILGYIDMPQRNCSVIAAAAHGPVLLTIFHTELTDDTRLHAFFLEQFVFPSLAAGPRSKQ LACGTETPAEKMQRDSGSAFAHIARDGDRPPHHLGNRCA

    No Results
  • title: conserved cys residue
  • coordinates: C88
IDSitePositionGscoreIscore
NCLIV_0234T2450.5240.215
IDSitePositionGscoreIscore
NCLIV_0234T2450.5240.215
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India