NCLIV_024470 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
NCLIV_024470OTHER0.9996650.0003080.000027
No Results

  • Fasta :-

    >NCLIV_024470 MGESCTCKWLPLEADPLLFAQYVNALGGPTSAAVEHGGETEKKHEGHEALLSFEDVLSLE DWAVDMIAHPTVAVLLLFPITEATEKARKEQEKQEATSKHLENIWFTKQTVGNACGTVAL LHCIANLPRDKFPLQPGQFLEHFLKETADLSPDARAKLLETDRSLANSHKTFETKGQSAV PTPESDVDTHFVAFVCGGNGHLIELDGRRAAPVDHGPIGEEGTTLEAVAQSQRLLKKAVS VIKKEFVDRCPGELRFQIIAVGDAKAQRV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_024470.fa Sequence name : NCLIV_024470 Sequence length : 269 VALUES OF COMPUTED PARAMETERS Coef20 : 3.654 CoefTot : -0.250 ChDiff : -12 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.288 1.806 0.163 0.669 MesoH : -0.617 0.256 -0.459 0.272 MuHd_075 : 16.782 3.813 5.567 1.546 MuHd_095 : 17.131 10.166 3.738 4.119 MuHd_100 : 7.183 5.940 1.868 2.376 MuHd_105 : 4.874 8.407 2.625 0.890 Hmax_075 : 13.650 11.900 2.713 4.363 Hmax_095 : 6.038 9.713 1.380 3.867 Hmax_100 : 5.000 11.500 1.417 3.590 Hmax_105 : 13.000 13.300 3.372 4.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9478 0.0522 DFMC : 0.9682 0.0318
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 269 NCLIV_024470 MGESCTCKWLPLEADPLLFAQYVNALGGPTSAAVEHGGETEKKHEGHEALLSFEDVLSLEDWAVDMIAHPTVAVLLLFPI 80 TEATEKARKEQEKQEATSKHLENIWFTKQTVGNACGTVALLHCIANLPRDKFPLQPGQFLEHFLKETADLSPDARAKLLE 160 TDRSLANSHKTFETKGQSAVPTPESDVDTHFVAFVCGGNGHLIELDGRRAAPVDHGPIGEEGTTLEAVAQSQRLLKKAVS 240 VIKKEFVDRCPGELRFQIIAVGDAKAQRV 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_024470 8 GESCTCK|WL 0.069 . NCLIV_024470 42 HGGETEK|KH 0.065 . NCLIV_024470 43 GGETEKK|HE 0.121 . NCLIV_024470 86 ITEATEK|AR 0.065 . NCLIV_024470 88 EATEKAR|KE 0.091 . NCLIV_024470 89 ATEKARK|EQ 0.101 . NCLIV_024470 93 ARKEQEK|QE 0.078 . NCLIV_024470 99 KQEATSK|HL 0.076 . NCLIV_024470 108 ENIWFTK|QT 0.068 . NCLIV_024470 129 CIANLPR|DK 0.127 . NCLIV_024470 131 ANLPRDK|FP 0.058 . NCLIV_024470 145 FLEHFLK|ET 0.062 . NCLIV_024470 155 DLSPDAR|AK 0.090 . NCLIV_024470 157 SPDARAK|LL 0.075 . NCLIV_024470 163 KLLETDR|SL 0.112 . NCLIV_024470 170 SLANSHK|TF 0.084 . NCLIV_024470 175 HKTFETK|GQ 0.080 . NCLIV_024470 208 LIELDGR|RA 0.090 . NCLIV_024470 209 IELDGRR|AA 0.102 . NCLIV_024470 233 AVAQSQR|LL 0.088 . NCLIV_024470 236 QSQRLLK|KA 0.143 . NCLIV_024470 237 SQRLLKK|AV 0.209 . NCLIV_024470 243 KAVSVIK|KE 0.060 . NCLIV_024470 244 AVSVIKK|EF 0.108 . NCLIV_024470 249 KKEFVDR|CP 0.114 . NCLIV_024470 255 RCPGELR|FQ 0.089 . NCLIV_024470 265 IAVGDAK|AQ 0.065 . NCLIV_024470 268 GDAKAQR|V- 0.095 . ____________________________^_________________

  • Fasta :-

    >NCLIV_024470 ATGGGCGAGTCGTGCACATGCAAGTGGTTGCCTCTGGAGGCTGACCCGCTCCTCTTTGCG CAGTACGTGAACGCGCTGGGCGGACCAACGTCTGCCGCCGTCGAGCACGGAGGCGAGACG GAGAAGAAGCACGAAGGCCACGAGGCGCTCCTCTCCTTCGAAGACGTCCTCTCTCTGGAG GACTGGGCAGTCGACATGATCGCGCATCCAACTGTCGCAGTTCTCCTCCTCTTCCCCATC ACGGAGGCGACGGAAAAGGCCAGAAAAGAGCAAGAAAAACAAGAAGCGACAAGCAAACAC CTGGAAAACATCTGGTTCACCAAACAAACTGTCGGCAATGCATGCGGCACGGTAGCCCTT CTCCACTGCATCGCAAATCTCCCACGTGACAAATTTCCTCTTCAGCCTGGCCAGTTTCTG GAACATTTCCTCAAAGAAACAGCGGATCTCTCCCCTGACGCGCGGGCGAAGCTGCTGGAG ACGGACCGCTCGCTGGCGAACTCGCACAAGACCTTCGAGACGAAGGGCCAGTCAGCTGTA CCTACACCCGAGAGCGACGTGGATACCCACTTTGTTGCCTTTGTCTGTGGCGGAAACGGG CATTTGATTGAACTGGATGGGAGACGCGCCGCCCCCGTAGATCACGGCCCTATCGGGGAA GAGGGAACGACGCTGGAAGCTGTGGCCCAGAGCCAGCGTCTTCTCAAGAAAGCTGTCAGC GTCATCAAGAAGGAGTTTGTCGACAGATGCCCCGGCGAACTGCGCTTTCAAATCATCGCT GTCGGCGACGCAAAGGCGCAACGTGTGTGA
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  • Fasta :-

    MGESCTCKWLPLEADPLLFAQYVNALGGPTSAAVEHGGETEKKHEGHEALLSFEDVLSLE DWAVDMIAHPTVAVLLLFPITEATEKARKEQEKQEATSKHLENIWFTKQTVGNACGTVAL LHCIANLPRDKFPLQPGQFLEHFLKETADLSPDARAKLLETDRSLANSHKTFETKGQSAV PTPESDVDTHFVAFVCGGNGHLIELDGRRAAPVDHGPIGEEGTTLEAVAQSQRLLKKAVS VIKKEFVDRCPGELRFQIIAVGDAKAQRV

  • title: catalytic site
  • coordinates: Q109,C115,H190,D206
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_02447058 SEDVLSLEDW0.995unspNCLIV_024470168 SSLANSHKTF0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India