NCLIV_025990 | conserved hypothetical protein

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_025990OTHER0.9981510.0018370.000012
No Results

  • Fasta :-

    >NCLIV_025990 MGIGSSNLGDAILFPAPAASYDAQLPGLLWIEEDFPPLAPRGSLSPEEAAELEAVHRHSR AHQRLFPAFFISAPGGESQCTILYWHGNSCDLGQIYEELDVLSKFLNAHVLAIEFPGYGL APPLNGPGPEDLAAAAIGAEGSSADEAAVRRTASGLSKNKMGDLINKWSRSAFNFLAWLG VTPSNVLCFGRSIGTGPASYLAAALAEQNIHVGGVVLHAPYITVHKIVQEYASLGTWLIS NHWSNAANLEKMAVASCPLLIVHGLDDEVIPTSHGRRLFETYQSEKKEGFFPADSSHNRY YIIDDLGKPMEAFLRDKSLVTGAPAVRVEIPAYVRAPPQWQLQSQRAGVAPLVCEADSAS FVADAAISALPSSPASPEAAEAREALAEFASPAREAALQAAQGGSAVVAATAHAVDRSNS ALGNLIASATGSKGGQWNVGISHPPRASEASEEKRRDGAGGAEGNAPHFSQMIESGIFSR GSLEEIMGEALREVNRDGAGNAQTP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_025990.fa Sequence name : NCLIV_025990 Sequence length : 505 VALUES OF COMPUTED PARAMETERS Coef20 : 3.599 CoefTot : -0.538 ChDiff : -20 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.365 1.335 0.134 0.566 MesoH : 0.356 0.626 -0.181 0.375 MuHd_075 : 12.824 15.225 4.338 4.589 MuHd_095 : 14.244 8.660 3.878 2.114 MuHd_100 : 15.122 7.658 4.021 2.024 MuHd_105 : 15.568 6.837 4.268 2.090 Hmax_075 : 16.000 16.400 3.231 6.380 Hmax_095 : 14.262 12.425 2.468 4.980 Hmax_100 : 13.500 11.800 2.198 4.980 Hmax_105 : 11.783 9.917 2.406 4.550 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9207 0.0793 DFMC : 0.9220 0.0780
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 505 NCLIV_025990 MGIGSSNLGDAILFPAPAASYDAQLPGLLWIEEDFPPLAPRGSLSPEEAAELEAVHRHSRAHQRLFPAFFISAPGGESQC 80 TILYWHGNSCDLGQIYEELDVLSKFLNAHVLAIEFPGYGLAPPLNGPGPEDLAAAAIGAEGSSADEAAVRRTASGLSKNK 160 MGDLINKWSRSAFNFLAWLGVTPSNVLCFGRSIGTGPASYLAAALAEQNIHVGGVVLHAPYITVHKIVQEYASLGTWLIS 240 NHWSNAANLEKMAVASCPLLIVHGLDDEVIPTSHGRRLFETYQSEKKEGFFPADSSHNRYYIIDDLGKPMEAFLRDKSLV 320 TGAPAVRVEIPAYVRAPPQWQLQSQRAGVAPLVCEADSASFVADAAISALPSSPASPEAAEAREALAEFASPAREAALQA 400 AQGGSAVVAATAHAVDRSNSALGNLIASATGSKGGQWNVGISHPPRASEASEEKRRDGAGGAEGNAPHFSQMIESGIFSR 480 GSLEEIMGEALREVNRDGAGNAQTP 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ......................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_025990 41 FPPLAPR|GS 0.085 . NCLIV_025990 57 ELEAVHR|HS 0.102 . NCLIV_025990 60 AVHRHSR|AH 0.253 . NCLIV_025990 64 HSRAHQR|LF 0.110 . NCLIV_025990 104 ELDVLSK|FL 0.063 . NCLIV_025990 150 ADEAAVR|RT 0.083 . NCLIV_025990 151 DEAAVRR|TA 0.180 . NCLIV_025990 158 TASGLSK|NK 0.070 . NCLIV_025990 160 SGLSKNK|MG 0.063 . NCLIV_025990 167 MGDLINK|WS 0.063 . NCLIV_025990 170 LINKWSR|SA 0.201 . NCLIV_025990 191 NVLCFGR|SI 0.231 . NCLIV_025990 226 PYITVHK|IV 0.067 . NCLIV_025990 251 NAANLEK|MA 0.073 . NCLIV_025990 276 IPTSHGR|RL 0.095 . NCLIV_025990 277 PTSHGRR|LF 0.183 . NCLIV_025990 286 ETYQSEK|KE 0.059 . NCLIV_025990 287 TYQSEKK|EG 0.076 . NCLIV_025990 299 ADSSHNR|YY 0.111 . NCLIV_025990 308 IIDDLGK|PM 0.065 . NCLIV_025990 315 PMEAFLR|DK 0.107 . NCLIV_025990 317 EAFLRDK|SL 0.082 . NCLIV_025990 327 TGAPAVR|VE 0.075 . NCLIV_025990 335 EIPAYVR|AP 0.069 . NCLIV_025990 346 WQLQSQR|AG 0.080 . NCLIV_025990 383 PEAAEAR|EA 0.152 . NCLIV_025990 394 EFASPAR|EA 0.094 . NCLIV_025990 417 TAHAVDR|SN 0.224 . NCLIV_025990 433 ASATGSK|GG 0.060 . NCLIV_025990 446 GISHPPR|AS 0.214 . NCLIV_025990 454 SEASEEK|RR 0.065 . NCLIV_025990 455 EASEEKR|RD 0.299 . NCLIV_025990 456 ASEEKRR|DG 0.193 . NCLIV_025990 480 ESGIFSR|GS 0.114 . NCLIV_025990 492 IMGEALR|EV 0.100 . NCLIV_025990 496 ALREVNR|DG 0.103 . ____________________________^_________________

  • Fasta :-

    >NCLIV_025990 ATGGGAATAGGCTCAAGCAATCTGGGGGATGCGATCCTCTTCCCCGCTCCGGCAGCCTCG TACGATGCACAACTGCCGGGCTTGTTGTGGATCGAGGAAGACTTCCCGCCCCTCGCTCCG CGCGGGAGTCTCTCGCCTGAAGAGGCCGCGGAGCTGGAGGCCGTCCATCGACACTCCCGA GCGCACCAGCGCCTGTTTCCTGCGTTCTTCATCTCAGCTCCCGGCGGGGAAAGTCAGTGC ACCATCCTCTACTGGCATGGCAACTCGTGCGACTTGGGACAAATCTACGAAGAACTCGAC GTCCTCTCCAAGTTTCTCAATGCCCACGTGCTGGCAATTGAATTCCCTGGTTACGGCCTT GCTCCCCCGCTGAACGGACCGGGCCCCGAAGACCTCGCCGCAGCTGCAATCGGCGCAGAG GGTTCGTCGGCCGACGAGGCAGCTGTGCGCCGCACTGCCTCGGGGCTGTCGAAGAACAAG ATGGGGGACTTGATCAACAAGTGGAGCCGATCAGCATTCAACTTTCTCGCCTGGCTCGGC GTCACGCCGTCGAATGTGCTGTGCTTCGGGCGAAGCATCGGAACAGGCCCCGCCAGCTAC TTGGCCGCCGCTTTGGCAGAGCAGAACATCCACGTCGGAGGCGTCGTCCTGCATGCACCG TACATCACTGTCCACAAAATCGTGCAAGAATATGCGTCTCTGGGCACCTGGCTCATCTCG AATCACTGGAGCAATGCAGCGAACCTGGAGAAGATGGCTGTTGCCTCGTGTCCCCTTCTG ATCGTCCATGGACTCGACGACGAGGTTATCCCGACCAGCCACGGCCGGAGGCTCTTCGAA ACGTACCAATCCGAGAAGAAGGAAGGCTTTTTCCCTGCTGATTCCTCGCACAACCGCTAC TACATCATTGACGATTTAGGTAAACCGATGGAGGCGTTTCTCCGAGACAAGAGCCTGGTG ACCGGCGCTCCTGCAGTGCGCGTGGAGATTCCCGCGTACGTCCGCGCGCCGCCGCAGTGG CAGCTCCAGTCTCAGCGCGCAGGCGTCGCGCCGCTTGTCTGTGAAGCGGATTCGGCGTCT TTTGTCGCAGACGCCGCGATCTCTGCGCTGCCTTCTTCGCCGGCTTCTCCGGAAGCGGCC GAGGCGAGGGAGGCCTTGGCCGAGTTCGCGTCGCCCGCCAGAGAAGCAGCGCTCCAAGCC GCGCAGGGTGGGTCGGCAGTCGTCGCGGCGACGGCGCATGCAGTGGATCGGAGCAACTCT GCGCTGGGGAACTTGATTGCCTCGGCAACAGGGTCCAAGGGCGGTCAGTGGAACGTGGGC ATCTCGCACCCCCCGCGCGCGAGCGAAGCGAGCGAAGAGAAGAGAAGAGACGGCGCCGGC GGGGCAGAAGGCAACGCGCCGCATTTCTCGCAGATGATTGAAAGTGGAATCTTCTCGAGA GGTTCGCTGGAAGAAATCATGGGCGAGGCGCTTCGCGAGGTCAATCGAGATGGAGCGGGA AATGCGCAGACGCCCTGA
  • Download Fasta

  • Fasta :-

    MGIGSSNLGDAILFPAPAASYDAQLPGLLWIEEDFPPLAPRGSLSPEEAAELEAVHRHSR AHQRLFPAFFISAPGGESQCTILYWHGNSCDLGQIYEELDVLSKFLNAHVLAIEFPGYGL APPLNGPGPEDLAAAAIGAEGSSADEAAVRRTASGLSKNKMGDLINKWSRSAFNFLAWLG VTPSNVLCFGRSIGTGPASYLAAALAEQNIHVGGVVLHAPYITVHKIVQEYASLGTWLIS NHWSNAANLEKMAVASCPLLIVHGLDDEVIPTSHGRRLFETYQSEKKEGFFPADSSHNRY YIIDDLGKPMEAFLRDKSLVTGAPAVRVEIPAYVRAPPQWQLQSQRAGVAPLVCEADSAS FVADAAISALPSSPASPEAAEAREALAEFASPAREAALQAAQGGSAVVAATAHAVDRSNS ALGNLIASATGSKGGQWNVGISHPPRASEASEEKRRDGAGGAEGNAPHFSQMIESGIFSR GSLEEIMGEALREVNRDGAGNAQTP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_025990376 SSSPASPEAA0.998unspNCLIV_025990376 SSSPASPEAA0.998unspNCLIV_025990376 SSSPASPEAA0.998unspNCLIV_025990482 SFSRGSLEEI0.997unspNCLIV_02599045 SRGSLSPEEA0.998unspNCLIV_02599059 SVHRHSRAHQ0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India