NCLIV_026530 | putative ubiquitin thiolesterase protein

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_026530OTHER0.9999990.0000010.000000
No Results

  • Fasta :-

    >NCLIV_026530 MTDSNGGIDPAPDSGTSAGPAEANTTHESEGGSVPEWQQEIESQPLVGAVESLDCLLRDF EGNAALCAKAQTFIKEQQKRRDVSFSASRTPGDGARGAEADEGRVGGSGEDSVQGTEGAW AMRRIRKDGCCFYRAYMYGVFLYFLRQRESIKVFIRRINEELLPQVHEVNVGAETVADFA EETVENLQKLESPEASMQTLDDIFNDTCSSNYIVVFARLLASTHIKLNSELYLPFLTAYA TVEEYCSHEVDPMWVEAEQPQIMALTAMTQMPVEIVYFDQSPGEEPGKCTCRIICSLSLL RLHCLDYSR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_026530.fa Sequence name : NCLIV_026530 Sequence length : 309 VALUES OF COMPUTED PARAMETERS Coef20 : 2.620 CoefTot : 0.000 ChDiff : -23 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.206 1.382 0.251 0.538 MesoH : -0.334 0.349 -0.352 0.258 MuHd_075 : 24.245 5.522 4.755 2.892 MuHd_095 : 17.808 11.914 5.622 3.628 MuHd_100 : 24.603 15.908 6.426 4.536 MuHd_105 : 28.862 17.590 6.715 4.802 Hmax_075 : 8.575 -0.788 -0.011 1.820 Hmax_095 : 10.700 4.700 0.905 3.030 Hmax_100 : 12.300 8.400 1.842 4.060 Hmax_105 : 11.900 8.000 1.563 3.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9676 0.0324 DFMC : 0.9527 0.0473
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 309 NCLIV_026530 MTDSNGGIDPAPDSGTSAGPAEANTTHESEGGSVPEWQQEIESQPLVGAVESLDCLLRDFEGNAALCAKAQTFIKEQQKR 80 RDVSFSASRTPGDGARGAEADEGRVGGSGEDSVQGTEGAWAMRRIRKDGCCFYRAYMYGVFLYFLRQRESIKVFIRRINE 160 ELLPQVHEVNVGAETVADFAEETVENLQKLESPEASMQTLDDIFNDTCSSNYIVVFARLLASTHIKLNSELYLPFLTAYA 240 TVEEYCSHEVDPMWVEAEQPQIMALTAMTQMPVEIVYFDQSPGEEPGKCTCRIICSLSLLRLHCLDYSR 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_026530 58 SLDCLLR|DF 0.091 . NCLIV_026530 69 NAALCAK|AQ 0.071 . NCLIV_026530 75 KAQTFIK|EQ 0.064 . NCLIV_026530 79 FIKEQQK|RR 0.060 . NCLIV_026530 80 IKEQQKR|RD 0.119 . NCLIV_026530 81 KEQQKRR|DV 0.410 . NCLIV_026530 89 VSFSASR|TP 0.093 . NCLIV_026530 96 TPGDGAR|GA 0.212 . NCLIV_026530 104 AEADEGR|VG 0.125 . NCLIV_026530 123 EGAWAMR|RI 0.095 . NCLIV_026530 124 GAWAMRR|IR 0.117 . NCLIV_026530 126 WAMRRIR|KD 0.244 . NCLIV_026530 127 AMRRIRK|DG 0.281 . NCLIV_026530 134 DGCCFYR|AY 0.103 . NCLIV_026530 146 VFLYFLR|QR 0.074 . NCLIV_026530 148 LYFLRQR|ES 0.081 . NCLIV_026530 152 RQRESIK|VF 0.065 . NCLIV_026530 156 SIKVFIR|RI 0.097 . NCLIV_026530 157 IKVFIRR|IN 0.212 . NCLIV_026530 189 TVENLQK|LE 0.069 . NCLIV_026530 218 YIVVFAR|LL 0.079 . NCLIV_026530 226 LASTHIK|LN 0.071 . NCLIV_026530 288 PGEEPGK|CT 0.073 . NCLIV_026530 292 PGKCTCR|II 0.081 . NCLIV_026530 301 CSLSLLR|LH 0.057 . NCLIV_026530 309 HCLDYSR|-- 0.077 . ____________________________^_________________

  • Fasta :-

    >NCLIV_026530 ATGACGGACTCAAACGGAGGAATCGACCCCGCTCCAGACTCCGGCACATCAGCGGGGCCT GCAGAAGCGAATACAACTCACGAGAGCGAAGGAGGTTCGGTGCCGGAATGGCAACAGGAG ATCGAGAGCCAACCCCTTGTCGGGGCAGTGGAGAGCCTGGACTGTCTTTTGCGGGATTTC GAAGGCAACGCTGCACTCTGTGCAAAGGCCCAGACGTTCATTAAGGAGCAGCAAAAGAGA AGGGACGTTTCTTTCAGCGCGAGTCGAACGCCAGGAGATGGAGCGAGAGGCGCGGAGGCG GACGAGGGGAGGGTGGGAGGTTCAGGGGAGGACTCTGTGCAGGGAACTGAGGGCGCGTGG GCAATGCGGAGAATACGCAAAGACGGCTGCTGCTTTTATCGCGCGTACATGTACGGCGTT TTCCTCTACTTTCTTCGCCAACGCGAGAGTATCAAAGTCTTCATCAGACGGATCAACGAG GAACTTCTGCCCCAGGTCCACGAAGTCAACGTGGGCGCAGAAACCGTGGCGGACTTCGCT GAAGAAACCGTGGAGAACTTGCAGAAGCTGGAGTCCCCTGAAGCCAGCATGCAGACGCTC GACGACATCTTCAACGACACATGCAGCAGCAATTACATTGTTGTTTTCGCGCGTCTGCTC GCGTCGACGCACATTAAGTTGAACAGTGAACTGTACTTGCCGTTCCTGACCGCGTATGCC ACAGTGGAAGAGTACTGCTCCCACGAAGTGGATCCGATGTGGGTGGAGGCTGAGCAACCT CAAATCATGGCGTTGACGGCGATGACACAGATGCCTGTGGAGATCGTCTATTTCGATCAG TCGCCCGGCGAGGAGCCAGGTAAGTGTACATGCCGAATCATTTGTAGTCTTTCGTTGCTT CGCCTCCATTGTTTAGACTATTCCCGTTAG
  • Download Fasta

  • Fasta :-

    MTDSNGGIDPAPDSGTSAGPAEANTTHESEGGSVPEWQQEIESQPLVGAVESLDCLLRDF EGNAALCAKAQTFIKEQQKRRDVSFSASRTPGDGARGAEADEGRVGGSGEDSVQGTEGAW AMRRIRKDGCCFYRAYMYGVFLYFLRQRESIKVFIRRINEELLPQVHEVNVGAETVADFA EETVENLQKLESPEASMQTLDDIFNDTCSSNYIVVFARLLASTHIKLNSELYLPFLTAYA TVEEYCSHEVDPMWVEAEQPQIMALTAMTQMPVEIVYFDQSPGEEPGKCTCRIICSLSLL RLHCLDYSR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_026530108 SRVGGSGEDS0.997unspNCLIV_026530108 SRVGGSGEDS0.997unspNCLIV_026530108 SRVGGSGEDS0.997unspNCLIV_026530192 SQKLESPEAS0.992unspNCLIV_026530281 SYFDQSPGEE0.991unspNCLIV_02653084 SRRDVSFSAS0.994unspNCLIV_02653086 SDVSFSASRT0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India