NCLIV_028520 | putative methionine aminopeptidase

_IDPredictionOTHERSPmTPCS_Position
NCLIV_028520OTHER0.9989300.0007530.000317
No Results

  • Fasta :-

    >NCLIV_028520 MNREGEYAVLPAHPIPASIPRPPYASSSRGQTDRGFHTSDAPGEIQTPEALEKIRAAAAV AANALKLGLDAAREGVTTEDLDKIVHEYIVSVGAYPAAVNFHNFPKAVCASVNEAVCHGI PDLRPLQDGDIVTLDCTAYVDGFFGDCAGTAMVGNVSEAHRNLVETSKECLDAAVKLLHP GLPIREVGRCVAELAQKRGFSVVREFCGHFIGRKMHLPPLISHVYPNDTQGVFRVGQTFT IEPILCEGAPDLFTWKDGWTIVTQDGGRAAQFEHTILMTPEGAELLTQATI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_028520.fa Sequence name : NCLIV_028520 Sequence length : 291 VALUES OF COMPUTED PARAMETERS Coef20 : 3.085 CoefTot : 0.001 ChDiff : -12 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.647 1.206 0.085 0.475 MesoH : -0.391 0.442 -0.247 0.277 MuHd_075 : 17.963 12.231 5.246 4.735 MuHd_095 : 18.689 10.480 4.433 4.060 MuHd_100 : 22.043 11.995 5.829 4.550 MuHd_105 : 23.805 11.669 6.266 4.532 Hmax_075 : 14.817 14.467 2.520 5.647 Hmax_095 : 7.525 5.512 -0.719 3.325 Hmax_100 : 13.100 12.200 2.071 4.980 Hmax_105 : 8.500 10.300 0.534 4.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9467 0.0533 DFMC : 0.9473 0.0527
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 291 NCLIV_028520 MNREGEYAVLPAHPIPASIPRPPYASSSRGQTDRGFHTSDAPGEIQTPEALEKIRAAAAVAANALKLGLDAAREGVTTED 80 LDKIVHEYIVSVGAYPAAVNFHNFPKAVCASVNEAVCHGIPDLRPLQDGDIVTLDCTAYVDGFFGDCAGTAMVGNVSEAH 160 RNLVETSKECLDAAVKLLHPGLPIREVGRCVAELAQKRGFSVVREFCGHFIGRKMHLPPLISHVYPNDTQGVFRVGQTFT 240 IEPILCEGAPDLFTWKDGWTIVTQDGGRAAQFEHTILMTPEGAELLTQATI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_028520 3 ----MNR|EG 0.080 . NCLIV_028520 21 IPASIPR|PP 0.101 . NCLIV_028520 29 PYASSSR|GQ 0.101 . NCLIV_028520 34 SRGQTDR|GF 0.154 . NCLIV_028520 53 TPEALEK|IR 0.065 . NCLIV_028520 55 EALEKIR|AA 0.106 . NCLIV_028520 66 VAANALK|LG 0.058 . NCLIV_028520 73 LGLDAAR|EG 0.075 . NCLIV_028520 83 TTEDLDK|IV 0.079 . NCLIV_028520 106 NFHNFPK|AV 0.117 . NCLIV_028520 124 HGIPDLR|PL 0.086 . NCLIV_028520 161 NVSEAHR|NL 0.080 . NCLIV_028520 168 NLVETSK|EC 0.059 . NCLIV_028520 176 CLDAAVK|LL 0.063 . NCLIV_028520 185 HPGLPIR|EV 0.164 . NCLIV_028520 189 PIREVGR|CV 0.106 . NCLIV_028520 197 VAELAQK|RG 0.059 . NCLIV_028520 198 AELAQKR|GF 0.182 . NCLIV_028520 204 RGFSVVR|EF 0.094 . NCLIV_028520 213 CGHFIGR|KM 0.080 . NCLIV_028520 214 GHFIGRK|MH 0.068 . NCLIV_028520 234 DTQGVFR|VG 0.078 . NCLIV_028520 256 PDLFTWK|DG 0.069 . NCLIV_028520 268 VTQDGGR|AA 0.084 . ____________________________^_________________

  • Fasta :-

    >NCLIV_028520 ATGAACAGGGAGGGCGAATACGCGGTGCTTCCCGCTCACCCGATCCCCGCCTCGATCCCG CGGCCGCCGTACGCCAGCAGTTCCAGGGGACAAACGGACAGAGGCTTCCACACGTCAGAC GCACCTGGAGAGATTCAGACTCCCGAAGCTCTGGAGAAAATCCGGGCGGCTGCTGCCGTT GCAGCGAATGCTCTGAAACTCGGCCTCGACGCCGCCCGCGAGGGCGTAACGACCGAGGAC CTCGACAAGATCGTGCACGAGTACATCGTCAGTGTTGGGGCGTATCCTGCAGCGGTGAAC TTCCACAACTTCCCCAAAGCAGTCTGCGCGTCCGTTAACGAGGCCGTTTGCCACGGGATT CCCGACCTTCGTCCTCTCCAAGATGGAGACATCGTCACTTTGGACTGCACTGCCTATGTC GACGGCTTCTTTGGAGACTGCGCAGGCACTGCGATGGTCGGGAATGTTAGTGAGGCTCAC CGTAATCTCGTCGAAACGTCCAAGGAGTGTTTGGACGCGGCGGTGAAGCTTCTCCACCCC GGCTTGCCGATCAGGGAGGTCGGTCGATGCGTCGCAGAGCTTGCGCAAAAAAGGGGATTT TCAGTAGTTCGCGAGTTCTGCGGTCACTTCATCGGGCGCAAAATGCACCTACCGCCGTTG ATTTCTCACGTCTACCCAAACGATACACAGGGCGTTTTCCGCGTTGGTCAGACCTTCACC ATCGAGCCAATTCTCTGCGAAGGCGCTCCAGACCTCTTCACCTGGAAGGACGGGTGGACC ATCGTGACCCAAGACGGCGGCCGAGCAGCACAGTTTGAACACACGATCCTAATGACGCCG GAGGGCGCGGAGCTTCTCACCCAGGCGACTATTTGA
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  • Fasta :-

    MNREGEYAVLPAHPIPASIPRPPYASSSRGQTDRGFHTSDAPGEIQTPEALEKIRAAAAV AANALKLGLDAAREGVTTEDLDKIVHEYIVSVGAYPAAVNFHNFPKAVCASVNEAVCHGI PDLRPLQDGDIVTLDCTAYVDGFFGDCAGTAMVGNVSEAHRNLVETSKECLDAAVKLLHP GLPIREVGRCVAELAQKRGFSVVREFCGHFIGRKMHLPPLISHVYPNDTQGVFRVGQTFT IEPILCEGAPDLFTWKDGWTIVTQDGGRAAQFEHTILMTPEGAELLTQATI

  • title: active site
  • coordinates: H118,D135,D146,H209,E242,E273
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India