NCLIV_037150 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_037150OTHER0.9999590.0000250.000015
No Results

  • Fasta :-

    >NCLIV_037150 MSGNAPKTAAAAGGEPQLDSLSSFASVAGLVANKIVVVHPIVLLSVVDHYNRVARGTSRR VVGTLLGEISDGEVHVTNSFALPFEEDPKDPNVWYLDRNYHEHLYHMFKKVNTRERILGW YSTGPQVRMTDLEIHEIFRRYTPNPVYVIVDINPKDSVVPTKAYYSFEQPTSDRAFRRTF VHVASTIGALEAEEVGVEHLLRDLKNASTSTLATRVADKLSALKLLIGKIQEIYAYLQDA ANKKLVANPNIMYTIQDIFNLLPDLSDPYLIEAFTIQANDTMLNLYLGSVVRSVLALHNL INNKVENKRASEAKKEKKEDEATEEKKKETASNDTKKTHKEGSQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_037150.fa Sequence name : NCLIV_037150 Sequence length : 344 VALUES OF COMPUTED PARAMETERS Coef20 : 3.098 CoefTot : -0.433 ChDiff : -2 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.988 2.047 0.073 0.633 MesoH : -0.457 0.543 -0.309 0.253 MuHd_075 : 7.287 7.767 3.158 2.499 MuHd_095 : 17.353 5.162 4.359 2.316 MuHd_100 : 14.546 5.388 4.142 1.752 MuHd_105 : 12.686 9.206 4.384 2.293 Hmax_075 : 4.433 6.183 -0.471 3.103 Hmax_095 : 5.337 1.500 -0.794 2.091 Hmax_100 : 9.800 4.500 0.527 2.920 Hmax_105 : 6.000 2.300 -0.060 2.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9953 0.0047 DFMC : 0.9910 0.0090
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 344 NCLIV_037150 MSGNAPKTAAAAGGEPQLDSLSSFASVAGLVANKIVVVHPIVLLSVVDHYNRVARGTSRRVVGTLLGEISDGEVHVTNSF 80 ALPFEEDPKDPNVWYLDRNYHEHLYHMFKKVNTRERILGWYSTGPQVRMTDLEIHEIFRRYTPNPVYVIVDINPKDSVVP 160 TKAYYSFEQPTSDRAFRRTFVHVASTIGALEAEEVGVEHLLRDLKNASTSTLATRVADKLSALKLLIGKIQEIYAYLQDA 240 ANKKLVANPNIMYTIQDIFNLLPDLSDPYLIEAFTIQANDTMLNLYLGSVVRSVLALHNLINNKVENKRASEAKKEKKED 320 EATEEKKKETASNDTKKTHKEGSQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_037150 7 MSGNAPK|TA 0.083 . NCLIV_037150 34 AGLVANK|IV 0.061 . NCLIV_037150 52 VVDHYNR|VA 0.071 . NCLIV_037150 55 HYNRVAR|GT 0.448 . NCLIV_037150 59 VARGTSR|RV 0.105 . NCLIV_037150 60 ARGTSRR|VV 0.433 . NCLIV_037150 89 PFEEDPK|DP 0.059 . NCLIV_037150 98 NVWYLDR|NY 0.091 . NCLIV_037150 109 HLYHMFK|KV 0.089 . NCLIV_037150 110 LYHMFKK|VN 0.115 . NCLIV_037150 114 FKKVNTR|ER 0.080 . NCLIV_037150 116 KVNTRER|IL 0.123 . NCLIV_037150 128 STGPQVR|MT 0.133 . NCLIV_037150 139 EIHEIFR|RY 0.081 . NCLIV_037150 140 IHEIFRR|YT 0.110 . NCLIV_037150 155 IVDINPK|DS 0.057 . NCLIV_037150 162 DSVVPTK|AY 0.072 . NCLIV_037150 174 EQPTSDR|AF 0.083 . NCLIV_037150 177 TSDRAFR|RT 0.283 . NCLIV_037150 178 SDRAFRR|TF 0.210 . NCLIV_037150 202 GVEHLLR|DL 0.114 . NCLIV_037150 205 HLLRDLK|NA 0.129 . NCLIV_037150 215 TSTLATR|VA 0.091 . NCLIV_037150 219 ATRVADK|LS 0.060 . NCLIV_037150 224 DKLSALK|LL 0.057 . NCLIV_037150 229 LKLLIGK|IQ 0.056 . NCLIV_037150 243 LQDAANK|KL 0.061 . NCLIV_037150 244 QDAANKK|LV 0.110 . NCLIV_037150 292 YLGSVVR|SV 0.163 . NCLIV_037150 304 HNLINNK|VE 0.054 . NCLIV_037150 308 NNKVENK|RA 0.071 . NCLIV_037150 309 NKVENKR|AS 0.195 . NCLIV_037150 314 KRASEAK|KE 0.080 . NCLIV_037150 315 RASEAKK|EK 0.151 . NCLIV_037150 317 SEAKKEK|KE 0.072 . NCLIV_037150 318 EAKKEKK|ED 0.123 . NCLIV_037150 326 DEATEEK|KK 0.062 . NCLIV_037150 327 EATEEKK|KE 0.093 . NCLIV_037150 328 ATEEKKK|ET 0.093 . NCLIV_037150 336 TASNDTK|KT 0.090 . NCLIV_037150 337 ASNDTKK|TH 0.112 . NCLIV_037150 340 DTKKTHK|EG 0.069 . ____________________________^_________________

  • Fasta :-

    >NCLIV_037150 ATGAGCGGGAACGCGCCGAAGACGGCTGCCGCCGCAGGCGGAGAGCCACAGCTTGATTCC CTGTCCTCTTTCGCCTCAGTTGCTGGGCTTGTGGCCAACAAAATTGTCGTCGTACACCCC ATCGTTCTCCTCTCAGTCGTGGACCACTACAACCGTGTCGCGCGAGGGACGAGTCGGCGA GTCGTGGGCACGTTGTTAGGGGAGATTTCCGATGGCGAAGTCCACGTGACAAACAGTTTC GCCCTCCCCTTTGAAGAAGACCCGAAGGATCCCAATGTGTGGTATTTGGACCGGAACTAC CACGAGCACCTCTACCACATGTTCAAGAAAGTCAACACTCGCGAGAGAATTTTGGGCTGG TACAGCACCGGTCCTCAAGTCCGTATGACCGACCTGGAAATCCACGAAATATTCAGGCGA TACACCCCAAACCCGGTGTACGTTATTGTGGACATCAACCCCAAAGACTCCGTCGTTCCC ACCAAGGCCTACTACTCCTTCGAGCAACCGACCAGCGACCGCGCATTTCGAAGAACGTTT GTCCACGTTGCCTCCACAATCGGCGCCTTGGAAGCGGAGGAAGTCGGTGTCGAGCATCTT CTGAGGGACTTGAAAAACGCCTCGACGTCCACGCTCGCCACACGCGTGGCTGACAAACTG TCAGCGTTGAAACTCTTAATCGGGAAGATCCAGGAGATCTACGCCTACCTCCAGGACGCG GCGAACAAGAAACTGGTGGCAAACCCGAACATCATGTACACCATTCAGGATATCTTCAAC TTGCTACCCGACTTGAGCGATCCATATCTCATCGAAGCTTTTACCATTCAGGCCAACGAC ACGATGCTAAATCTCTATCTTGGCAGCGTCGTGCGCTCTGTGCTGGCCCTACACAATCTC ATCAACAACAAAGTGGAGAACAAGCGCGCCAGTGAGGCGAAGAAGGAGAAGAAGGAAGAC GAAGCGACAGAAGAGAAGAAAAAGGAAACTGCAAGCAATGACACGAAGAAGACACACAAA GAAGGCTCACAATGA
  • Download Fasta

  • Fasta :-

    MSGNAPKTAAAAGGEPQLDSLSSFASVAGLVANKIVVVHPIVLLSVVDHYNRVARGTSRR VVGTLLGEISDGEVHVTNSFALPFEEDPKDPNVWYLDRNYHEHLYHMFKKVNTRERILGW YSTGPQVRMTDLEIHEIFRRYTPNPVYVIVDINPKDSVVPTKAYYSFEQPTSDRAFRRTF VHVASTIGALEAEEVGVEHLLRDLKNASTSTLATRVADKLSALKLLIGKIQEIYAYLQDA ANKKLVANPNIMYTIQDIFNLLPDLSDPYLIEAFTIQANDTMLNLYLGSVVRSVLALHNL INNKVENKRASEAKKEKKEDEATEEKKKETASNDTKKTHKEGSQ

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_037150311 SNKRASEAKK0.991unspNCLIV_037150311 SNKRASEAKK0.991unspNCLIV_037150311 SNKRASEAKK0.991unspNCLIV_03715057 TVARGTSRRV0.994unspNCLIV_037150157 SNPKDSVVPT0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India