NCLIV_037220 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_037220OTHER0.9998380.0001500.000012
No Results

  • Fasta :-

    >NCLIV_037220 MSDAEEKPILTLRTCRLYAEDVALFRPAQWLNDACISFFFEALQAAAELYFMARACHENQ TIAEGIARWLAEGIEPLSEKNEELLRCKLGLSSPACQPSAGEPASCNVTSRQEEHSEALL SLDLTEQDEAQVCSPILFVDPCVAFWVSMCTDESEVQDTLENLHIPRRSVVVWPITDHQD PSTVGGTHWTLLIQIVCNRAVNRNATAQNDYNAHDPVQLLSGYQYFHFDSIGHNCQQSRG NLAAARRLQALLGRFVKISTSTDSPPAGDHDRSDRTPIPLRCTPPQSNASDCGVHCLLFA ERLLQLVVKKDRDFFKGKDNSGDRRSKQTTPSVDVETGPLYPELPFDVSWFSLPDLQRFE PSVLAARRRGAILLVNKLTQRGGGC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_037220.fa Sequence name : NCLIV_037220 Sequence length : 385 VALUES OF COMPUTED PARAMETERS Coef20 : 3.999 CoefTot : 0.112 ChDiff : -13 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.665 0.288 0.605 MesoH : -0.616 0.263 -0.355 0.197 MuHd_075 : 18.981 9.535 6.008 4.027 MuHd_095 : 9.739 6.053 3.226 0.530 MuHd_100 : 24.905 6.433 6.060 3.352 MuHd_105 : 35.484 8.451 7.792 5.363 Hmax_075 : 5.017 9.917 1.332 3.080 Hmax_095 : -1.500 3.200 -0.451 0.640 Hmax_100 : 10.100 6.400 1.912 2.980 Hmax_105 : 3.500 6.800 0.524 2.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9824 0.0176 DFMC : 0.9558 0.0442
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 385 NCLIV_037220 MSDAEEKPILTLRTCRLYAEDVALFRPAQWLNDACISFFFEALQAAAELYFMARACHENQTIAEGIARWLAEGIEPLSEK 80 NEELLRCKLGLSSPACQPSAGEPASCNVTSRQEEHSEALLSLDLTEQDEAQVCSPILFVDPCVAFWVSMCTDESEVQDTL 160 ENLHIPRRSVVVWPITDHQDPSTVGGTHWTLLIQIVCNRAVNRNATAQNDYNAHDPVQLLSGYQYFHFDSIGHNCQQSRG 240 NLAAARRLQALLGRFVKISTSTDSPPAGDHDRSDRTPIPLRCTPPQSNASDCGVHCLLFAERLLQLVVKKDRDFFKGKDN 320 SGDRRSKQTTPSVDVETGPLYPELPFDVSWFSLPDLQRFEPSVLAARRRGAILLVNKLTQRGGGC 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_037220 7 MSDAEEK|PI 0.062 . NCLIV_037220 13 KPILTLR|TC 0.077 . NCLIV_037220 16 LTLRTCR|LY 0.139 . NCLIV_037220 26 EDVALFR|PA 0.084 . NCLIV_037220 54 ELYFMAR|AC 0.108 . NCLIV_037220 68 IAEGIAR|WL 0.102 . NCLIV_037220 80 IEPLSEK|NE 0.056 . NCLIV_037220 86 KNEELLR|CK 0.061 . NCLIV_037220 88 EELLRCK|LG 0.052 . NCLIV_037220 111 SCNVTSR|QE 0.145 . NCLIV_037220 167 ENLHIPR|RS 0.074 . NCLIV_037220 168 NLHIPRR|SV 0.351 . NCLIV_037220 199 IQIVCNR|AV 0.118 . NCLIV_037220 203 CNRAVNR|NA 0.151 . NCLIV_037220 239 HNCQQSR|GN 0.102 . NCLIV_037220 246 GNLAAAR|RL 0.092 . NCLIV_037220 247 NLAAARR|LQ 0.095 . NCLIV_037220 254 LQALLGR|FV 0.150 . NCLIV_037220 257 LLGRFVK|IS 0.104 . NCLIV_037220 272 PAGDHDR|SD 0.126 . NCLIV_037220 275 DHDRSDR|TP 0.193 . NCLIV_037220 281 RTPIPLR|CT 0.080 . NCLIV_037220 302 CLLFAER|LL 0.070 . NCLIV_037220 309 LLQLVVK|KD 0.068 . NCLIV_037220 310 LQLVVKK|DR 0.094 . NCLIV_037220 312 LVVKKDR|DF 0.140 . NCLIV_037220 316 KDRDFFK|GK 0.092 . NCLIV_037220 318 RDFFKGK|DN 0.095 . NCLIV_037220 324 KDNSGDR|RS 0.084 . NCLIV_037220 325 DNSGDRR|SK 0.244 . NCLIV_037220 327 SGDRRSK|QT 0.153 . NCLIV_037220 358 SLPDLQR|FE 0.092 . NCLIV_037220 367 PSVLAAR|RR 0.088 . NCLIV_037220 368 SVLAARR|RG 0.096 . NCLIV_037220 369 VLAARRR|GA 0.178 . NCLIV_037220 377 AILLVNK|LT 0.062 . NCLIV_037220 381 VNKLTQR|GG 0.095 . ____________________________^_________________

  • Fasta :-

    >NCLIV_037220 ATGTCGGATGCGGAGGAAAAGCCCATTTTGACACTCAGGACCTGTCGGTTATACGCAGAG GACGTTGCCCTCTTTCGTCCTGCTCAGTGGCTCAACGATGCGTGCATCTCGTTTTTTTTC GAAGCTCTGCAGGCTGCAGCTGAGTTGTACTTCATGGCCAGGGCCTGCCATGAGAACCAG ACGATAGCGGAAGGAATAGCGCGCTGGCTAGCCGAAGGCATTGAACCACTTAGCGAGAAG AATGAAGAACTGCTGCGCTGTAAGCTGGGACTGAGCAGCCCAGCGTGTCAACCCTCTGCA GGCGAGCCCGCGTCGTGTAACGTGACGTCTAGGCAAGAAGAGCACTCCGAGGCGTTATTG TCTTTGGACTTGACAGAACAGGACGAGGCACAGGTGTGTTCTCCCATTCTGTTTGTCGAT CCGTGTGTGGCCTTTTGGGTCTCAATGTGTACTGATGAGTCTGAAGTACAGGACACCCTT GAAAATTTGCATATACCACGCCGGTCAGTGGTAGTATGGCCCATCACCGACCACCAGGAT CCCTCAACCGTGGGAGGCACACACTGGACATTGCTAATTCAAATAGTGTGTAACAGAGCG GTGAACAGAAATGCAACGGCCCAAAACGATTACAATGCACACGATCCGGTACAACTGCTC AGCGGTTACCAGTATTTTCACTTCGACAGCATTGGCCACAACTGCCAGCAATCACGCGGT AATCTGGCTGCTGCAAGACGGCTTCAGGCACTGCTAGGTCGGTTTGTGAAGATCTCCACC TCAACAGACTCCCCCCCGGCTGGAGACCACGACAGATCAGATAGAACACCGATCCCGCTG CGTTGCACGCCACCTCAGAGCAACGCGTCCGACTGTGGAGTGCACTGTTTGCTATTTGCG GAGAGACTTCTACAACTGGTGGTCAAAAAGGATCGTGACTTCTTCAAAGGAAAGGATAAC TCTGGCGACCGGCGTTCGAAACAGACGACGCCGTCTGTCGACGTAGAGACCGGTCCACTA TACCCGGAACTTCCGTTTGACGTATCATGGTTTTCGTTGCCCGATCTCCAAAGGTTCGAG CCTTCAGTTCTGGCTGCCCGGAGACGTGGCGCAATCTTGCTGGTCAATAAGCTGACTCAA AGAGGCGGTGGCTGCTGA
  • Download Fasta

  • Fasta :-

    MSDAEEKPILTLRTCRLYAEDVALFRPAQWLNDACISFFFEALQAAAELYFMARACHENQ TIAEGIARWLAEGIEPLSEKNEELLRCKLGLSSPACQPSAGEPASCNVTSRQEEHSEALL SLDLTEQDEAQVCSPILFVDPCVAFWVSMCTDESEVQDTLENLHIPRRSVVVWPITDHQD PSTVGGTHWTLLIQIVCNRAVNRNATAQNDYNAHDPVQLLSGYQYFHFDSIGHNCQQSRG NLAAARRLQALLGRFVKISTSTDSPPAGDHDRSDRTPIPLRCTPPQSNASDCGVHCLLFA ERLLQLVVKKDRDFFKGKDNSGDRRSKQTTPSVDVETGPLYPELPFDVSWFSLPDLQRFE PSVLAARRRGAILLVNKLTQRGGGC

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_03722078 SIEPLSEKNE0.996unspNCLIV_037220264 STSTDSPPAG0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India