NCLIV_038400 | methionine aminopeptidase

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_038400OTHER0.9998350.0001610.000004
No Results

  • Fasta :-

    >NCLIV_038400 MADATGSEVEAEVVQDLSNPDVVTKYRTAADIVNGALKKVISGCIPGADVYALCKTGDAY ISEACAKVYNKKENGKKMEKGIAFPTCISINEICGHFSPVEENAETDRVLTEGDVVKIDM GCHIDGYISVVAYTVVCDAALPGIFEGTPGAQQGRISGRKADVIKACWTAAEACMRLVKA GHKSTDLTKTIELAAKQYGCTPLQGVLSHQLKRYVIEGSKCFAGATPGPGEDEPEEFEFE PNEVYGVDIVISSGEGKARDAAIKPTVYKRAVDRTYILKSQLGRHFMSEVQNKYPTLPFS LRGFSDDRACKVGVAEAMRHELLHPYPVMTEKPGEFVAQFKFTLLLLPTGTKKVTGLPLL YEKELDSSHTVEDESLKALLAVSVNPKKLKKKAQVEKKEDGGNA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_038400.fa Sequence name : NCLIV_038400 Sequence length : 404 VALUES OF COMPUTED PARAMETERS Coef20 : 3.260 CoefTot : 0.141 ChDiff : -5 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.147 1.718 0.287 0.599 MesoH : -0.585 0.406 -0.269 0.259 MuHd_075 : 14.812 10.378 3.836 1.992 MuHd_095 : 21.128 17.731 6.375 5.007 MuHd_100 : 7.873 11.044 3.888 3.092 MuHd_105 : 13.244 8.642 3.214 2.071 Hmax_075 : 13.067 15.050 2.599 4.305 Hmax_095 : 6.125 11.900 0.602 4.121 Hmax_100 : 2.600 9.400 0.106 3.450 Hmax_105 : 13.200 11.900 1.776 3.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9554 0.0446 DFMC : 0.9816 0.0184
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 404 NCLIV_038400 MADATGSEVEAEVVQDLSNPDVVTKYRTAADIVNGALKKVISGCIPGADVYALCKTGDAYISEACAKVYNKKENGKKMEK 80 GIAFPTCISINEICGHFSPVEENAETDRVLTEGDVVKIDMGCHIDGYISVVAYTVVCDAALPGIFEGTPGAQQGRISGRK 160 ADVIKACWTAAEACMRLVKAGHKSTDLTKTIELAAKQYGCTPLQGVLSHQLKRYVIEGSKCFAGATPGPGEDEPEEFEFE 240 PNEVYGVDIVISSGEGKARDAAIKPTVYKRAVDRTYILKSQLGRHFMSEVQNKYPTLPFSLRGFSDDRACKVGVAEAMRH 320 ELLHPYPVMTEKPGEFVAQFKFTLLLLPTGTKKVTGLPLLYEKELDSSHTVEDESLKALLAVSVNPKKLKKKAQVEKKED 400 GGNA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_038400 25 NPDVVTK|YR 0.070 . NCLIV_038400 27 DVVTKYR|TA 0.119 . NCLIV_038400 38 IVNGALK|KV 0.070 . NCLIV_038400 39 VNGALKK|VI 0.124 . NCLIV_038400 55 DVYALCK|TG 0.059 . NCLIV_038400 67 ISEACAK|VY 0.079 . NCLIV_038400 71 CAKVYNK|KE 0.058 . NCLIV_038400 72 AKVYNKK|EN 0.129 . NCLIV_038400 76 NKKENGK|KM 0.073 . NCLIV_038400 77 KKENGKK|ME 0.092 . NCLIV_038400 80 NGKKMEK|GI 0.059 . NCLIV_038400 108 ENAETDR|VL 0.092 . NCLIV_038400 117 TEGDVVK|ID 0.065 . NCLIV_038400 155 PGAQQGR|IS 0.112 . NCLIV_038400 159 QGRISGR|KA 0.143 . NCLIV_038400 160 GRISGRK|AD 0.080 . NCLIV_038400 165 RKADVIK|AC 0.077 . NCLIV_038400 176 AAEACMR|LV 0.133 . NCLIV_038400 179 ACMRLVK|AG 0.132 . NCLIV_038400 183 LVKAGHK|ST 0.070 . NCLIV_038400 189 KSTDLTK|TI 0.068 . NCLIV_038400 196 TIELAAK|QY 0.075 . NCLIV_038400 212 VLSHQLK|RY 0.066 . NCLIV_038400 213 LSHQLKR|YV 0.451 . NCLIV_038400 220 YVIEGSK|CF 0.057 . NCLIV_038400 257 ISSGEGK|AR 0.087 . NCLIV_038400 259 SGEGKAR|DA 0.175 . NCLIV_038400 264 ARDAAIK|PT 0.064 . NCLIV_038400 269 IKPTVYK|RA 0.062 . NCLIV_038400 270 KPTVYKR|AV 0.363 . NCLIV_038400 274 YKRAVDR|TY 0.084 . NCLIV_038400 279 DRTYILK|SQ 0.068 . NCLIV_038400 284 LKSQLGR|HF 0.120 . NCLIV_038400 293 MSEVQNK|YP 0.064 . NCLIV_038400 302 TLPFSLR|GF 0.117 . NCLIV_038400 308 RGFSDDR|AC 0.078 . NCLIV_038400 311 SDDRACK|VG 0.093 . NCLIV_038400 319 GVAEAMR|HE 0.069 . NCLIV_038400 332 YPVMTEK|PG 0.065 . NCLIV_038400 341 EFVAQFK|FT 0.071 . NCLIV_038400 352 LLPTGTK|KV 0.061 . NCLIV_038400 353 LPTGTKK|VT 0.090 . NCLIV_038400 363 LPLLYEK|EL 0.061 . NCLIV_038400 377 VEDESLK|AL 0.058 . NCLIV_038400 387 AVSVNPK|KL 0.071 . NCLIV_038400 388 VSVNPKK|LK 0.092 . NCLIV_038400 390 VNPKKLK|KK 0.073 . NCLIV_038400 391 NPKKLKK|KA 0.114 . NCLIV_038400 392 PKKLKKK|AQ 0.109 . NCLIV_038400 397 KKAQVEK|KE 0.076 . NCLIV_038400 398 KAQVEKK|ED 0.134 . ____________________________^_________________

  • Fasta :-

    >NCLIV_038400 ATGGCAGACGCGACCGGTTCAGAAGTTGAGGCGGAGGTTGTTCAGGATCTGAGCAATCCT GACGTCGTCACCAAGTACCGCACTGCGGCAGATATCGTAAACGGCGCGCTCAAGAAGGTG ATCAGCGGCTGCATTCCGGGAGCGGACGTCTACGCTTTGTGCAAGACAGGCGACGCGTAC ATCTCGGAAGCATGCGCCAAGGTGTACAACAAGAAGGAGAACGGGAAAAAGATGGAGAAA GGCATTGCCTTTCCAACGTGCATCTCCATCAACGAGATTTGCGGACATTTCTCTCCGGTT GAGGAGAACGCGGAAACAGACAGAGTTTTGACCGAAGGTGACGTTGTGAAGATTGATATG GGGTGTCACATCGACGGCTATATTTCCGTCGTCGCCTACACAGTTGTATGCGACGCAGCC TTGCCCGGAATCTTTGAAGGCACTCCTGGTGCACAACAAGGACGCATTAGCGGCAGAAAA GCAGATGTCATCAAGGCCTGCTGGACGGCTGCCGAAGCGTGCATGCGACTGGTGAAGGCG GGCCACAAGAGCACAGACCTCACAAAGACCATCGAACTCGCAGCGAAACAATACGGCTGC ACTCCTCTTCAGGGTGTCCTGTCTCACCAACTCAAGCGATATGTCATCGAGGGCAGCAAA TGCTTTGCCGGCGCAACGCCGGGTCCAGGCGAAGACGAGCCGGAAGAGTTTGAGTTCGAA CCGAATGAAGTGTACGGTGTCGACATCGTCATCTCATCCGGCGAAGGCAAGGCAAGAGAC GCAGCAATCAAACCGACAGTGTACAAGAGGGCTGTCGACCGCACGTACATCCTCAAGTCT CAACTTGGGCGGCACTTCATGAGTGAAGTGCAAAATAAATACCCGACACTGCCATTTTCG CTTCGCGGCTTCTCAGACGACAGAGCATGCAAGGTTGGCGTTGCGGAAGCGATGCGCCAC GAGCTCCTTCACCCGTACCCCGTTATGACAGAGAAACCAGGCGAATTCGTAGCCCAGTTC AAATTCACTCTCCTCCTCCTCCCCACGGGCACAAAGAAGGTCACCGGTCTCCCCTTGCTG TACGAGAAGGAATTGGATAGCAGTCACACAGTTGAGGATGAAAGCCTAAAGGCATTGCTA GCCGTTTCGGTGAATCCGAAGAAACTGAAGAAGAAGGCGCAGGTGGAGAAGAAGGAAGAT GGAGGAAACGCTTAG
  • Download Fasta

  • Fasta :-

    MADATGSEVEAEVVQDLSNPDVVTKYRTAADIVNGALKKVISGCIPGADVYALCKTGDAY ISEACAKVYNKKENGKKMEKGIAFPTCISINEICGHFSPVEENAETDRVLTEGDVVKIDM GCHIDGYISVVAYTVVCDAALPGIFEGTPGAQQGRISGRKADVIKACWTAAEACMRLVKA GHKSTDLTKTIELAAKQYGCTPLQGVLSHQLKRYVIEGSKCFAGATPGPGEDEPEEFEFE PNEVYGVDIVISSGEGKARDAAIKPTVYKRAVDRTYILKSQLGRHFMSEVQNKYPTLPFS LRGFSDDRACKVGVAEAMRHELLHPYPVMTEKPGEFVAQFKFTLLLLPTGTKKVTGLPLL YEKELDSSHTVEDESLKALLAVSVNPKKLKKKAQVEKKEDGGNA

  • title: active site
  • coordinates: H96,D119,V130,E255,H324,K341
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_038400157 SQGRISGRKA0.996unspNCLIV_038400375 SVEDESLKAL0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India