NCLIV_047130 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_047130OTHER0.9999940.0000030.000003
No Results

  • Fasta :-

    >NCLIV_047130 MPEKLKALVEKQKNMEEEMEALADYLNQPGMPGLTGRLVDDEGFPRADIDIYAIRGARNR LAVLKTDYKEICSQIEKELFAVHAQGAVAVPRTGSARSRDALHAASASTDSSAALETCPF TPFAKISELHENSPASKAGLRLDDLVLQLGSIFIHKESLPRLSEAGNAQAAAYPGGDTPG CTSVEQVFEKLPQEVGNHVGQEISITVFRNNAMVNLKLIPQTWEGMGLVGCRFTPVKQGM L
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_047130.fa Sequence name : NCLIV_047130 Sequence length : 241 VALUES OF COMPUTED PARAMETERS Coef20 : 2.835 CoefTot : -0.253 ChDiff : -6 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.406 1.188 -0.095 0.403 MesoH : -0.724 0.081 -0.425 0.154 MuHd_075 : 18.053 11.370 4.573 2.422 MuHd_095 : 27.831 17.519 7.427 4.273 MuHd_100 : 36.823 20.917 9.439 5.619 MuHd_105 : 37.434 20.108 9.463 5.897 Hmax_075 : -0.933 5.600 -3.283 2.287 Hmax_095 : -8.700 2.800 -5.149 0.850 Hmax_100 : 2.700 8.600 -2.017 2.990 Hmax_105 : 10.700 10.500 -0.026 3.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9894 0.0106 DFMC : 0.9891 0.0109
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 241 NCLIV_047130 MPEKLKALVEKQKNMEEEMEALADYLNQPGMPGLTGRLVDDEGFPRADIDIYAIRGARNRLAVLKTDYKEICSQIEKELF 80 AVHAQGAVAVPRTGSARSRDALHAASASTDSSAALETCPFTPFAKISELHENSPASKAGLRLDDLVLQLGSIFIHKESLP 160 RLSEAGNAQAAAYPGGDTPGCTSVEQVFEKLPQEVGNHVGQEISITVFRNNAMVNLKLIPQTWEGMGLVGCRFTPVKQGM 240 L 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 . 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_047130 4 ---MPEK|LK 0.063 . NCLIV_047130 6 -MPEKLK|AL 0.065 . NCLIV_047130 11 LKALVEK|QK 0.091 . NCLIV_047130 13 ALVEKQK|NM 0.071 . NCLIV_047130 37 MPGLTGR|LV 0.221 . NCLIV_047130 46 DDEGFPR|AD 0.085 . NCLIV_047130 55 IDIYAIR|GA 0.107 . NCLIV_047130 58 YAIRGAR|NR 0.190 . NCLIV_047130 60 IRGARNR|LA 0.095 . NCLIV_047130 65 NRLAVLK|TD 0.068 . NCLIV_047130 69 VLKTDYK|EI 0.064 . NCLIV_047130 77 ICSQIEK|EL 0.071 . NCLIV_047130 92 GAVAVPR|TG 0.094 . NCLIV_047130 97 PRTGSAR|SR 0.180 . NCLIV_047130 99 TGSARSR|DA 0.180 . NCLIV_047130 125 PFTPFAK|IS 0.067 . NCLIV_047130 137 ENSPASK|AG 0.063 . NCLIV_047130 141 ASKAGLR|LD 0.078 . NCLIV_047130 156 GSIFIHK|ES 0.061 . NCLIV_047130 161 HKESLPR|LS 0.101 . NCLIV_047130 190 VEQVFEK|LP 0.069 . NCLIV_047130 209 ISITVFR|NN 0.085 . NCLIV_047130 217 NAMVNLK|LI 0.064 . NCLIV_047130 232 MGLVGCR|FT 0.107 . NCLIV_047130 237 CRFTPVK|QG 0.062 . ____________________________^_________________

  • Fasta :-

    >NCLIV_047130 ATGCCTGAGAAGCTAAAGGCTCTGGTTGAGAAGCAGAAAAACATGGAGGAAGAAATGGAG GCCCTTGCTGACTATCTCAACCAACCGGGAATGCCCGGATTGACTGGCAGGCTGGTCGAC GATGAGGGTTTCCCGCGTGCAGATATAGACATTTATGCCATTCGTGGCGCCCGCAACCGG TTGGCTGTCCTCAAGACCGACTACAAAGAGATTTGTTCCCAGATCGAGAAGGAGCTCTTT GCCGTGCACGCCCAAGGCGCAGTGGCGGTGCCCCGCACGGGCTCTGCTCGCTCCAGAGAC GCTTTGCATGCGGCATCGGCGTCCACTGATTCAAGTGCTGCTTTGGAGACCTGTCCCTTC ACTCCGTTCGCTAAGATCAGTGAGCTACATGAGAACAGTCCAGCGTCGAAAGCTGGTCTC CGTTTGGATGATCTCGTTCTTCAGCTTGGTTCAATCTTCATTCACAAGGAAAGCCTGCCA CGGTTGTCGGAGGCAGGTAATGCACAGGCTGCCGCTTATCCGGGAGGAGATACACCCGGC TGTACTAGCGTGGAGCAGGTCTTCGAGAAGCTTCCACAGGAAGTGGGGAACCACGTAGGG CAAGAAATCAGTATAACTGTCTTCCGAAATAATGCGATGGTAAACCTGAAGCTTATTCCT CAAACGTGGGAAGGTATGGGACTCGTGGGATGCCGCTTCACGCCCGTAAAACAAGGGATG TTGTAA
  • Download Fasta

  • Fasta :-

    MPEKLKALVEKQKNMEEEMEALADYLNQPGMPGLTGRLVDDEGFPRADIDIYAIRGARNR LAVLKTDYKEICSQIEKELFAVHAQGAVAVPRTGSARSRDALHAASASTDSSAALETCPF TPFAKISELHENSPASKAGLRLDDLVLQLGSIFIHKESLPRLSEAGNAQAAAYPGGDTPG CTSVEQVFEKLPQEVGNHVGQEISITVFRNNAMVNLKLIPQTWEGMGLVGCRFTPVKQGM L

    No Results
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India