NCLIV_048090 | putative sterol-regulatory element binding protein site 2 protease

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_048090OTHER0.9999150.0000160.000070
No Results

  • Fasta :-

    >NCLIV_048090 MAGSVRIDARGMPFCCFPDAAASRPEGAYDACWVPPILGLAPVFWLTIFATIGFGVAAHF YWQPVILTGFVVFGYILSVALHEFAHAATAFKGGDESVVYSGYLTLDYLRYTSPLFSLGL PLLFLLLGNVALPGAAVTIQHSSLRGAKWKTLTALAGPLANLLCGFLFSGLLRLTLLSVD YYYTVLHMGLACLIYFESMSVIINMIPLPPLDGWAALEPWLPRSCFLRKAMEDPTLRRIL PLFVLAALFPVFAKVPFFGHAVNAVAITVFRAPSDLTPLAMQYFSMPYSQWRHMHPIPVP VDLRHAPASTDFVEGFLLQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_048090.fa Sequence name : NCLIV_048090 Sequence length : 319 VALUES OF COMPUTED PARAMETERS Coef20 : 3.977 CoefTot : 0.138 ChDiff : 0 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.212 2.412 0.444 0.854 MesoH : 1.119 1.174 0.046 0.587 MuHd_075 : 11.348 6.548 2.375 3.927 MuHd_095 : 17.016 8.991 5.262 2.783 MuHd_100 : 16.483 9.018 4.735 2.969 MuHd_105 : 16.152 7.979 3.669 3.824 Hmax_075 : 15.800 12.700 3.927 5.110 Hmax_095 : 15.837 13.387 2.954 4.576 Hmax_100 : 14.400 12.500 2.954 4.030 Hmax_105 : 15.400 17.150 5.837 4.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9220 0.0780 DFMC : 0.9490 0.0510
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 319 NCLIV_048090 MAGSVRIDARGMPFCCFPDAAASRPEGAYDACWVPPILGLAPVFWLTIFATIGFGVAAHFYWQPVILTGFVVFGYILSVA 80 LHEFAHAATAFKGGDESVVYSGYLTLDYLRYTSPLFSLGLPLLFLLLGNVALPGAAVTIQHSSLRGAKWKTLTALAGPLA 160 NLLCGFLFSGLLRLTLLSVDYYYTVLHMGLACLIYFESMSVIINMIPLPPLDGWAALEPWLPRSCFLRKAMEDPTLRRIL 240 PLFVLAALFPVFAKVPFFGHAVNAVAITVFRAPSDLTPLAMQYFSMPYSQWRHMHPIPVPVDLRHAPASTDFVEGFLLQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >NCLIV_048090 ATGGCGGGCTCCGTGCGCATCGACGCGCGAGGAATGCCCTTTTGTTGCTTTCCTGACGCT GCGGCGTCGCGACCTGAGGGCGCTTATGATGCGTGCTGGGTGCCCCCCATTCTCGGTCTT GCTCCAGTCTTCTGGCTTACCATTTTCGCGACAATTGGATTCGGGGTAGCCGCGCACTTC TATTGGCAACCTGTTATCCTCACAGGTTTTGTCGTCTTCGGATACATTCTCTCCGTTGCT CTCCACGAGTTCGCTCATGCGGCGACTGCGTTCAAGGGCGGGGATGAGTCTGTTGTCTAC TCGGGGTACCTCACGCTCGACTACTTGAGGTACACGTCACCTCTCTTCTCCCTGGGCCTT CCTCTTCTCTTCCTTCTTCTCGGCAACGTCGCTCTTCCCGGCGCAGCGGTGACTATTCAG CATTCGAGCCTCCGCGGAGCCAAGTGGAAGACCCTTACAGCACTGGCGGGACCTCTCGCG AACTTGCTCTGTGGCTTTCTCTTCTCTGGCCTCCTCCGCCTGACTCTCCTCAGCGTGGAT TACTACTACACGGTTCTCCACATGGGCTTAGCCTGTCTGATCTACTTTGAGTCGATGAGC GTCATCATTAACATGATCCCTCTTCCTCCGCTCGACGGCTGGGCTGCGCTGGAGCCATGG CTGCCGCGCTCGTGCTTCCTCAGGAAAGCCATGGAGGACCCCACACTGCGGCGCATTCTG CCTCTCTTTGTTCTTGCGGCGCTCTTTCCGGTCTTTGCGAAGGTTCCTTTCTTTGGCCAC GCCGTGAACGCGGTAGCTATCACGGTCTTTCGGGCGCCATCCGATTTGACGCCGCTGGCC ATGCAGTACTTTTCCATGCCATACAGTCAGTGGCGACACATGCACCCGATCCCCGTCCCA GTGGACCTGCGGCACGCCCCCGCGTCCACGGATTTCGTGGAGGGCTTTCTTCTGCAGTGA
  • Download Fasta

  • Fasta :-

    MAGSVRIDARGMPFCCFPDAAASRPEGAYDACWVPPILGLAPVFWLTIFATIGFGVAAHF YWQPVILTGFVVFGYILSVALHEFAHAATAFKGGDESVVYSGYLTLDYLRYTSPLFSLGL PLLFLLLGNVALPGAAVTIQHSSLRGAKWKTLTALAGPLANLLCGFLFSGLLRLTLLSVD YYYTVLHMGLACLIYFESMSVIINMIPLPPLDGWAALEPWLPRSCFLRKAMEDPTLRRIL PLFVLAALFPVFAKVPFFGHAVNAVAITVFRAPSDLTPLAMQYFSMPYSQWRHMHPIPVP VDLRHAPASTDFVEGFLLQ

    No Results
  • title: active site
  • coordinates: H82,E83,H86,N204,D212
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India