NCLIV_061460 | Family T1, proteasome beta subunit, threonine peptidase, related

_IDPredictionOTHERSPmTPCS_Position
NCLIV_061460OTHER0.9966170.0031810.000202
No Results

  • Fasta :-

    >NCLIV_061460 MAYVADLSFLSDPLRLVRGEQSALCDDDETTRQELMQMLDTGKRLHFALPHVQNPGAFAC SLFKSPSTITSIDFSAVRGFCPPSAQTGSPAMAMKKGTTTLGFVFKGGIILAVDSRASMG TYISSQSVVKVIEISDIILGTMAGGAADCSYWERHMWLLCKLFKLRNGEPIPVAAASNML ANIFFHWRGYGLCCGTMIAGWNEKEEKPELYFVDDKATRLKGDLFSCGSGSTYAYGVLDN EYKWDMTDEEAVELGKRAIYQAAHRDGGSGGVVRVFHIHRGGWTKVIPGMDVSELHYEYA AKKGMPGHEL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_061460.fa Sequence name : NCLIV_061460 Sequence length : 310 VALUES OF COMPUTED PARAMETERS Coef20 : 4.090 CoefTot : 0.125 ChDiff : -4 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.459 1.465 0.185 0.617 MesoH : 0.314 0.614 -0.135 0.301 MuHd_075 : 4.673 4.082 1.356 0.261 MuHd_095 : 21.521 10.877 3.782 5.604 MuHd_100 : 15.827 8.829 3.411 5.487 MuHd_105 : 22.964 14.709 5.865 6.501 Hmax_075 : 2.333 13.883 -0.103 3.100 Hmax_095 : 5.513 11.463 0.152 4.340 Hmax_100 : 4.500 11.300 -0.093 4.340 Hmax_105 : 15.050 21.583 3.412 6.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8505 0.1495 DFMC : 0.9046 0.0954
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 310 NCLIV_061460 MAYVADLSFLSDPLRLVRGEQSALCDDDETTRQELMQMLDTGKRLHFALPHVQNPGAFACSLFKSPSTITSIDFSAVRGF 80 CPPSAQTGSPAMAMKKGTTTLGFVFKGGIILAVDSRASMGTYISSQSVVKVIEISDIILGTMAGGAADCSYWERHMWLLC 160 KLFKLRNGEPIPVAAASNMLANIFFHWRGYGLCCGTMIAGWNEKEEKPELYFVDDKATRLKGDLFSCGSGSTYAYGVLDN 240 EYKWDMTDEEAVELGKRAIYQAAHRDGGSGGVVRVFHIHRGGWTKVIPGMDVSELHYEYAAKKGMPGHEL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_061460 15 FLSDPLR|LV 0.135 . NCLIV_061460 18 DPLRLVR|GE 0.159 . NCLIV_061460 32 DDDETTR|QE 0.068 . NCLIV_061460 43 QMLDTGK|RL 0.065 . NCLIV_061460 44 MLDTGKR|LH 0.120 . NCLIV_061460 64 FACSLFK|SP 0.075 . NCLIV_061460 78 IDFSAVR|GF 0.080 . NCLIV_061460 95 SPAMAMK|KG 0.074 . NCLIV_061460 96 PAMAMKK|GT 0.129 . NCLIV_061460 106 TLGFVFK|GG 0.071 . NCLIV_061460 116 ILAVDSR|AS 0.089 . NCLIV_061460 130 SSQSVVK|VI 0.072 . NCLIV_061460 154 DCSYWER|HM 0.082 . NCLIV_061460 161 HMWLLCK|LF 0.055 . NCLIV_061460 164 LLCKLFK|LR 0.058 . NCLIV_061460 166 CKLFKLR|NG 0.094 . NCLIV_061460 188 NIFFHWR|GY 0.114 . NCLIV_061460 204 IAGWNEK|EE 0.060 . NCLIV_061460 207 WNEKEEK|PE 0.058 . NCLIV_061460 216 LYFVDDK|AT 0.063 . NCLIV_061460 219 VDDKATR|LK 0.089 . NCLIV_061460 221 DKATRLK|GD 0.060 . NCLIV_061460 243 VLDNEYK|WD 0.066 . NCLIV_061460 256 EAVELGK|RA 0.060 . NCLIV_061460 257 AVELGKR|AI 0.160 . NCLIV_061460 265 IYQAAHR|DG 0.116 . NCLIV_061460 274 GSGGVVR|VF 0.106 . NCLIV_061460 280 RVFHIHR|GG 0.086 . NCLIV_061460 285 HRGGWTK|VI 0.071 . NCLIV_061460 302 HYEYAAK|KG 0.065 . NCLIV_061460 303 YEYAAKK|GM 0.096 . ____________________________^_________________

  • Fasta :-

    >NCLIV_061460 ATGGCGTACGTCGCAGACCTTTCCTTCCTCTCGGATCCTTTGCGCCTCGTCCGCGGAGAG CAGTCGGCTCTGTGCGATGACGACGAGACCACCCGGCAAGAATTGATGCAGATGCTCGAC ACTGGCAAGCGGCTTCACTTTGCTCTGCCGCATGTGCAGAATCCGGGTGCCTTCGCATGC AGTCTGTTCAAATCCCCGTCGACGATCACGTCCATCGACTTCTCCGCAGTCCGCGGCTTC TGCCCTCCCTCGGCTCAGACAGGAAGCCCCGCGATGGCCATGAAGAAGGGAACGACAACT CTCGGATTCGTCTTCAAGGGTGGTATCATTCTCGCCGTGGACAGCAGAGCGTCGATGGGA ACGTACATCAGCAGTCAGAGCGTGGTGAAAGTCATCGAAATTTCCGACATTATTCTCGGT ACGATGGCCGGAGGCGCCGCGGACTGCAGCTACTGGGAGCGGCACATGTGGCTGTTGTGC AAATTGTTTAAGCTTCGAAATGGAGAACCCATCCCCGTCGCCGCTGCTTCGAACATGCTT GCAAACATCTTCTTCCACTGGAGAGGCTATGGACTGTGCTGTGGCACCATGATTGCAGGA TGGAACGAGAAGGAAGAGAAACCTGAGCTGTACTTTGTCGACGACAAGGCCACGCGACTC AAGGGCGATCTTTTCTCTTGCGGAAGTGGAAGCACGTATGCGTACGGAGTTCTCGACAAC GAGTACAAGTGGGACATGACCGACGAGGAGGCTGTGGAGCTCGGCAAGCGGGCGATCTAC CAAGCTGCGCACAGAGATGGAGGCTCTGGAGGCGTTGTCCGAGTGTTCCACATCCATCGC GGTGGGTGGACGAAGGTGATCCCCGGCATGGACGTCAGTGAATTGCACTACGAGTACGCA GCCAAGAAAGGCATGCCCGGCCACGAGTTGTAA
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  • Fasta :-

    MAYVADLSFLSDPLRLVRGEQSALCDDDETTRQELMQMLDTGKRLHFALPHVQNPGAFAC SLFKSPSTITSIDFSAVRGFCPPSAQTGSPAMAMKKGTTTLGFVFKGGIILAVDSRASMG TYISSQSVVKVIEISDIILGTMAGGAADCSYWERHMWLLCKLFKLRNGEPIPVAAASNML ANIFFHWRGYGLCCGTMIAGWNEKEEKPELYFVDDKATRLKGDLFSCGSGSTYAYGVLDN EYKWDMTDEEAVELGKRAIYQAAHRDGGSGGVVRVFHIHRGGWTKVIPGMDVSELHYEYA AKKGMPGHEL

  • title: active site
  • coordinates: T98,D114,R116,K130,S229,D266,S269,G270
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India