NCLIV_061740 | Hydrolase, alpha/beta fold family, related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_061740SP0.0149590.9832650.001776CS pos: 20-21. ALA-IL. Pr: 0.2600
No Results

  • Fasta :-

    >NCLIV_061740 MGLASNWSWAGLGCGLLALAILLPPDPGLRFRLPAVQPSTEPEGYTVWRRGADGTAYGRR TVYVESEGEKLHAWLYLPPNSRQNAPLYMVCHGFGAVMAVADVAFAEKIQESGIAAIAFD YRTWGFSGGAPRQVVDPHMQLQDMRAVLQHVVDTDGFQGTVDPTNIHLFGTSYAGGHVLV TAAQLASENSPLLRRVRTVTSVVPLIDGKEQTKKALQQRSFFRTLRYAAAILADLLRQAV GSHLQPIYLQVAGPRGVSSLSALELQGGELEIWRNRVLDSSRTASWTNALAARSLFHTSQ YRPIRYLEHIQTPTLLVEAQHDNTCIPELAREALEIINSRGGTNSEDRAGGKGSRDSRLA ELYRMPVNHFEIYVAPHLGRLINTTVEFAKRHGARQAASGAEPA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_061740.fa Sequence name : NCLIV_061740 Sequence length : 404 VALUES OF COMPUTED PARAMETERS Coef20 : 4.093 CoefTot : -0.633 ChDiff : 3 ZoneTo : 40 KR : 2 DE : 1 CleavSite : 34 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.006 1.847 0.374 0.766 MesoH : -0.431 0.295 -0.377 0.235 MuHd_075 : 21.376 9.149 5.727 3.711 MuHd_095 : 21.523 9.731 4.831 4.109 MuHd_100 : 21.493 12.614 5.905 3.613 MuHd_105 : 20.212 12.480 5.390 3.587 Hmax_075 : 12.800 22.517 3.651 5.273 Hmax_095 : 13.912 10.063 4.044 5.434 Hmax_100 : 14.000 14.000 3.999 5.360 Hmax_105 : 12.800 11.400 3.536 5.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9216 0.0784 DFMC : 0.8626 0.1374
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 404 NCLIV_061740 MGLASNWSWAGLGCGLLALAILLPPDPGLRFRLPAVQPSTEPEGYTVWRRGADGTAYGRRTVYVESEGEKLHAWLYLPPN 80 SRQNAPLYMVCHGFGAVMAVADVAFAEKIQESGIAAIAFDYRTWGFSGGAPRQVVDPHMQLQDMRAVLQHVVDTDGFQGT 160 VDPTNIHLFGTSYAGGHVLVTAAQLASENSPLLRRVRTVTSVVPLIDGKEQTKKALQQRSFFRTLRYAAAILADLLRQAV 240 GSHLQPIYLQVAGPRGVSSLSALELQGGELEIWRNRVLDSSRTASWTNALAARSLFHTSQYRPIRYLEHIQTPTLLVEAQ 320 HDNTCIPELAREALEIINSRGGTNSEDRAGGKGSRDSRLAELYRMPVNHFEIYVAPHLGRLINTTVEFAKRHGARQAASG 400 AEPA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_061740 30 PPDPGLR|FR 0.070 . NCLIV_061740 32 DPGLRFR|LP 0.093 . NCLIV_061740 49 EGYTVWR|RG 0.091 . NCLIV_061740 50 GYTVWRR|GA 0.196 . NCLIV_061740 59 DGTAYGR|RT 0.071 . NCLIV_061740 60 GTAYGRR|TV 0.185 . NCLIV_061740 70 VESEGEK|LH 0.054 . NCLIV_061740 82 YLPPNSR|QN 0.072 . NCLIV_061740 108 DVAFAEK|IQ 0.064 . NCLIV_061740 122 AIAFDYR|TW 0.118 . NCLIV_061740 132 FSGGAPR|QV 0.131 . NCLIV_061740 145 MQLQDMR|AV 0.122 . NCLIV_061740 194 ENSPLLR|RV 0.141 . NCLIV_061740 195 NSPLLRR|VR 0.075 . NCLIV_061740 197 PLLRRVR|TV 0.290 . NCLIV_061740 209 VPLIDGK|EQ 0.058 . NCLIV_061740 213 DGKEQTK|KA 0.069 . NCLIV_061740 214 GKEQTKK|AL 0.104 . NCLIV_061740 219 KKALQQR|SF 0.171 . NCLIV_061740 223 QQRSFFR|TL 0.100 . NCLIV_061740 226 SFFRTLR|YA 0.353 . NCLIV_061740 237 ILADLLR|QA 0.102 . NCLIV_061740 255 LQVAGPR|GV 0.112 . NCLIV_061740 274 GELEIWR|NR 0.057 . NCLIV_061740 276 LEIWRNR|VL 0.092 . NCLIV_061740 282 RVLDSSR|TA 0.087 . NCLIV_061740 293 TNALAAR|SL 0.161 . NCLIV_061740 302 FHTSQYR|PI 0.095 . NCLIV_061740 305 SQYRPIR|YL 0.441 . NCLIV_061740 331 CIPELAR|EA 0.089 . NCLIV_061740 340 LEIINSR|GG 0.089 . NCLIV_061740 348 GTNSEDR|AG 0.124 . NCLIV_061740 352 EDRAGGK|GS 0.073 . NCLIV_061740 355 AGGKGSR|DS 0.093 . NCLIV_061740 358 KGSRDSR|LA 0.339 . NCLIV_061740 364 RLAELYR|MP 0.080 . NCLIV_061740 380 VAPHLGR|LI 0.087 . NCLIV_061740 390 TTVEFAK|RH 0.074 . NCLIV_061740 391 TVEFAKR|HG 0.151 . NCLIV_061740 395 AKRHGAR|QA 0.139 . ____________________________^_________________

  • Fasta :-

    >NCLIV_061740 ATGGGTCTCGCCTCAAACTGGTCCTGGGCAGGGCTCGGCTGTGGACTCCTGGCTCTTGCC ATTCTTCTCCCACCAGACCCCGGCCTTCGCTTCAGGCTGCCGGCCGTCCAGCCCTCGACG GAACCAGAGGGGTACACTGTGTGGCGTCGAGGTGCGGACGGGACCGCGTACGGCCGGCGA ACGGTGTACGTGGAGAGTGAAGGCGAGAAGCTCCATGCTTGGCTGTATCTCCCGCCGAAT TCCCGTCAAAATGCTCCTCTCTACATGGTCTGCCACGGCTTCGGAGCTGTTATGGCCGTT GCGGACGTCGCGTTCGCGGAGAAAATTCAAGAAAGCGGGATCGCCGCCATCGCCTTTGAC TACAGGACTTGGGGTTTCTCGGGAGGGGCTCCGCGTCAGGTCGTAGACCCACACATGCAG CTGCAAGATATGCGCGCGGTGCTACAGCATGTTGTTGATACGGACGGGTTTCAGGGCACT GTTGACCCCACCAACATCCACTTGTTCGGCACTTCCTACGCAGGCGGCCACGTTTTAGTC ACGGCAGCTCAGCTGGCCAGCGAGAACTCCCCTTTGCTGCGCCGAGTACGCACAGTCACC TCCGTGGTGCCGCTCATCGACGGGAAGGAACAGACGAAGAAAGCGCTCCAGCAAAGATCC TTTTTCCGGACGCTGCGATACGCAGCAGCAATTCTCGCGGACTTGCTCCGACAGGCGGTC GGAAGTCACCTACAGCCTATATACCTCCAGGTTGCCGGGCCACGCGGAGTTTCAAGCCTG TCGGCCTTGGAGCTCCAAGGTGGAGAGTTGGAAATCTGGAGGAACCGCGTCTTGGACAGC TCTCGCACCGCGTCGTGGACGAATGCCTTGGCGGCACGGTCCCTGTTTCACACATCTCAG TATCGGCCGATCCGTTACCTGGAGCACATTCAGACCCCAACCCTTCTCGTGGAAGCCCAA CACGACAACACGTGCATCCCCGAGCTTGCACGGGAAGCGCTTGAGATCATCAACTCCCGT GGGGGGACGAATTCGGAAGACCGCGCCGGGGGCAAGGGCTCTCGGGACAGTCGACTAGCT GAGCTGTATCGCATGCCGGTCAATCACTTTGAAATATATGTAGCCCCTCACCTGGGGAGA CTCATTAATACCACAGTAGAGTTCGCGAAGAGGCATGGTGCACGCCAGGCTGCGTCCGGC GCCGAGCCTGCCTGA
  • Download Fasta

  • Fasta :-

    MGLASNWSWAGLGCGLLALAILLPPDPGLRFRLPAVQPSTEPEGYTVWRRGADGTAYGRR TVYVESEGEKLHAWLYLPPNSRQNAPLYMVCHGFGAVMAVADVAFAEKIQESGIAAIAFD YRTWGFSGGAPRQVVDPHMQLQDMRAVLQHVVDTDGFQGTVDPTNIHLFGTSYAGGHVLV TAAQLASENSPLLRRVRTVTSVVPLIDGKEQTKKALQQRSFFRTLRYAAAILADLLRQAV GSHLQPIYLQVAGPRGVSSLSALELQGGELEIWRNRVLDSSRTASWTNALAARSLFHTSQ YRPIRYLEHIQTPTLLVEAQHDNTCIPELAREALEIINSRGGTNSEDRAGGKGSRDSRLA ELYRMPVNHFEIYVAPHLGRLINTTVEFAKRHGARQAASGAEPA

    No Results
No Results
No Results
IDSitePeptideScoreMethod
NCLIV_061740285 SSRTASWTNA0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India