NCLIV_063760 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
NCLIV_063760OTHER0.9999460.0000510.000003
No Results

  • Fasta :-

    >NCLIV_063760 MGIEGANSGASARNADGGNRWCLIESDPGVFTELVEKVGVKGVEFDEIFGVDEESFQALK QRDRKIFGFVFLFNWTKDAAGAAAGEAADAGGEDVAMEDALSAAQSHPDLFFAKQVIENA CASQAILSILVNKRDEIKDVGSTIRALVDFTKDFLDPQMRGEAIGNSEHIRAAHNSFRSS SPFDWTDDDDEKEKEDAFHFVSYIFFKGNAYEMDGLQPGPKNLGSCDESSWTEIVRKRLQ SRIAKIQKAASGELRFNLMAVTEDNLSKLQEDIFRQRAIVQRAKVKLISSGKDIELDDEV DDDAAPAGTPTIDELPDDIAALETVIQEAEDRKKLLKVQEEEELDKRARWKKENVRRRHD FVPFILSVIQHLAKKGELVNAVKAAQQSVSRRQQERKKAKTGATGVSA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_063760.fa Sequence name : NCLIV_063760 Sequence length : 408 VALUES OF COMPUTED PARAMETERS Coef20 : 3.336 CoefTot : -0.250 ChDiff : -17 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.612 1.282 -0.005 0.518 MesoH : -0.710 0.328 -0.427 0.242 MuHd_075 : 15.963 8.237 3.111 2.891 MuHd_095 : 8.770 4.304 2.012 1.727 MuHd_100 : 5.571 0.734 1.111 0.397 MuHd_105 : 16.475 6.099 4.219 2.496 Hmax_075 : 11.433 7.117 1.141 3.267 Hmax_095 : -0.087 1.488 -1.259 2.205 Hmax_100 : 0.600 2.400 -0.764 2.040 Hmax_105 : 10.200 3.500 1.031 3.140 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9114 0.0886 DFMC : 0.9440 0.0560
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 408 NCLIV_063760 MGIEGANSGASARNADGGNRWCLIESDPGVFTELVEKVGVKGVEFDEIFGVDEESFQALKQRDRKIFGFVFLFNWTKDAA 80 GAAAGEAADAGGEDVAMEDALSAAQSHPDLFFAKQVIENACASQAILSILVNKRDEIKDVGSTIRALVDFTKDFLDPQMR 160 GEAIGNSEHIRAAHNSFRSSSPFDWTDDDDEKEKEDAFHFVSYIFFKGNAYEMDGLQPGPKNLGSCDESSWTEIVRKRLQ 240 SRIAKIQKAASGELRFNLMAVTEDNLSKLQEDIFRQRAIVQRAKVKLISSGKDIELDDEVDDDAAPAGTPTIDELPDDIA 320 ALETVIQEAEDRKKLLKVQEEEELDKRARWKKENVRRRHDFVPFILSVIQHLAKKGELVNAVKAAQQSVSRRQQERKKAK 400 TGATGVSA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_063760 13 NSGASAR|NA 0.211 . NCLIV_063760 20 NADGGNR|WC 0.066 . NCLIV_063760 37 FTELVEK|VG 0.053 . NCLIV_063760 41 VEKVGVK|GV 0.081 . NCLIV_063760 60 ESFQALK|QR 0.067 . NCLIV_063760 62 FQALKQR|DR 0.123 . NCLIV_063760 64 ALKQRDR|KI 0.089 . NCLIV_063760 65 LKQRDRK|IF 0.283 . NCLIV_063760 77 FLFNWTK|DA 0.079 . NCLIV_063760 114 PDLFFAK|QV 0.082 . NCLIV_063760 133 LSILVNK|RD 0.066 . NCLIV_063760 134 SILVNKR|DE 0.187 . NCLIV_063760 138 NKRDEIK|DV 0.110 . NCLIV_063760 145 DVGSTIR|AL 0.089 . NCLIV_063760 152 ALVDFTK|DF 0.069 . NCLIV_063760 160 FLDPQMR|GE 0.086 . NCLIV_063760 171 GNSEHIR|AA 0.223 . NCLIV_063760 178 AAHNSFR|SS 0.205 . NCLIV_063760 192 TDDDDEK|EK 0.071 . NCLIV_063760 194 DDDEKEK|ED 0.057 . NCLIV_063760 207 VSYIFFK|GN 0.077 . NCLIV_063760 221 GLQPGPK|NL 0.073 . NCLIV_063760 236 SWTEIVR|KR 0.078 . NCLIV_063760 237 WTEIVRK|RL 0.072 . NCLIV_063760 238 TEIVRKR|LQ 0.210 . NCLIV_063760 242 RKRLQSR|IA 0.130 . NCLIV_063760 245 LQSRIAK|IQ 0.149 . NCLIV_063760 248 RIAKIQK|AA 0.092 . NCLIV_063760 255 AASGELR|FN 0.105 . NCLIV_063760 268 TEDNLSK|LQ 0.079 . NCLIV_063760 275 LQEDIFR|QR 0.090 . NCLIV_063760 277 EDIFRQR|AI 0.085 . NCLIV_063760 282 QRAIVQR|AK 0.127 . NCLIV_063760 284 AIVQRAK|VK 0.055 . NCLIV_063760 286 VQRAKVK|LI 0.082 . NCLIV_063760 292 KLISSGK|DI 0.070 . NCLIV_063760 332 IQEAEDR|KK 0.070 . NCLIV_063760 333 QEAEDRK|KL 0.085 . NCLIV_063760 334 EAEDRKK|LL 0.103 . NCLIV_063760 337 DRKKLLK|VQ 0.068 . NCLIV_063760 346 EEEELDK|RA 0.062 . NCLIV_063760 347 EEELDKR|AR 0.142 . NCLIV_063760 349 ELDKRAR|WK 0.089 . NCLIV_063760 351 DKRARWK|KE 0.068 . NCLIV_063760 352 KRARWKK|EN 0.422 . NCLIV_063760 356 WKKENVR|RR 0.080 . NCLIV_063760 357 KKENVRR|RH 0.154 . NCLIV_063760 358 KENVRRR|HD 0.163 . NCLIV_063760 374 VIQHLAK|KG 0.064 . NCLIV_063760 375 IQHLAKK|GE 0.077 . NCLIV_063760 383 ELVNAVK|AA 0.067 . NCLIV_063760 391 AQQSVSR|RQ 0.072 . NCLIV_063760 392 QQSVSRR|QQ 0.212 . NCLIV_063760 396 SRRQQER|KK 0.131 . NCLIV_063760 397 RRQQERK|KA 0.158 . NCLIV_063760 398 RQQERKK|AK 0.116 . NCLIV_063760 400 QERKKAK|TG 0.082 . ____________________________^_________________

  • Fasta :-

    >NCLIV_063760 ATGGGAATCGAAGGCGCGAACAGTGGCGCTAGTGCGCGTAACGCAGATGGAGGGAATCGG TGGTGTCTGATTGAAAGTGACCCCGGAGTCTTCACAGAGCTCGTTGAGAAGGTGGGAGTA AAAGGCGTTGAGTTCGATGAGATTTTCGGCGTCGATGAGGAATCGTTCCAGGCACTGAAG CAGAGAGACCGAAAAATCTTCGGTTTCGTTTTCCTCTTCAACTGGACAAAGGACGCCGCA GGAGCGGCGGCTGGCGAGGCAGCTGACGCCGGCGGCGAGGACGTAGCGATGGAGGATGCT CTGAGCGCTGCCCAGTCCCACCCGGACCTTTTCTTCGCGAAACAGGTCATCGAGAACGCA TGCGCCAGCCAAGCCATCTTGTCCATTCTTGTCAACAAACGAGACGAAATTAAAGACGTT GGCTCCACAATCCGTGCACTCGTCGACTTCACCAAGGACTTCCTCGACCCTCAAATGCGT GGCGAGGCCATAGGCAACTCGGAGCATATACGAGCTGCGCACAACTCCTTCAGAAGTTCC AGTCCGTTTGACTGGACGGACGACGACGACGAGAAGGAGAAGGAAGACGCCTTCCACTTC GTGTCTTATATCTTTTTCAAGGGCAATGCGTATGAGATGGACGGCCTCCAACCGGGCCCC AAAAATTTGGGTTCCTGCGACGAGAGCAGCTGGACGGAGATTGTGAGGAAGCGGCTTCAA AGCAGAATTGCAAAGATTCAGAAGGCGGCGAGCGGCGAGCTGCGTTTCAACCTCATGGCT GTGACGGAAGATAACTTGTCGAAACTCCAGGAAGACATCTTCCGCCAGAGGGCGATTGTC CAGCGAGCAAAGGTCAAACTGATCAGCTCTGGCAAAGACATCGAACTCGACGACGAGGTC GACGACGACGCGGCCCCCGCAGGGACGCCGACGATCGACGAGCTCCCCGATGACATCGCC GCTCTCGAGACTGTCATTCAGGAAGCCGAGGACAGGAAGAAACTGTTGAAGGTGCAAGAA GAGGAAGAACTCGATAAGCGCGCTCGATGGAAAAAGGAGAATGTTCGGCGCCGTCACGAC TTTGTTCCCTTCATCCTGAGCGTCATCCAACATCTCGCGAAGAAGGGCGAGCTTGTGAAC GCAGTCAAGGCCGCGCAGCAGTCTGTCTCTCGACGGCAGCAGGAGAGGAAGAAAGCGAAA ACGGGTGCCACGGGCGTCTCTGCCTAA
  • Download Fasta

  • Fasta :-

    MGIEGANSGASARNADGGNRWCLIESDPGVFTELVEKVGVKGVEFDEIFGVDEESFQALK QRDRKIFGFVFLFNWTKDAAGAAAGEAADAGGEDVAMEDALSAAQSHPDLFFAKQVIENA CASQAILSILVNKRDEIKDVGSTIRALVDFTKDFLDPQMRGEAIGNSEHIRAAHNSFRSS SPFDWTDDDDEKEKEDAFHFVSYIFFKGNAYEMDGLQPGPKNLGSCDESSWTEIVRKRLQ SRIAKIQKAASGELRFNLMAVTEDNLSKLQEDIFRQRAIVQRAKVKLISSGKDIELDDEV DDDAAPAGTPTIDELPDDIAALETVIQEAEDRKKLLKVQEEEELDKRARWKKENVRRRHD FVPFILSVIQHLAKKGELVNAVKAAQQSVSRRQQERKKAKTGATGVSA

  • title: catalytic site
  • coordinates: Q115,C121,H199,D214
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_063760290 SKLISSGKDI0.996unspNCLIV_063760290 SKLISSGKDI0.996unspNCLIV_063760290 SKLISSGKDI0.996unspNCLIV_06376011 SNSGASARNA0.992unspNCLIV_063760181 SFRSSSPFDW0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India