NCLIV_064990 | putative methionine aminopeptidase

_IDPredictionOTHERSPmTPCS_Position
NCLIV_064990OTHER0.9998920.0001050.000003
No Results

  • Fasta :-

    >NCLIV_064990 MMAESASSPASTAAPSAPAGAQQDQVRCEGCGNLVKPELLCPTCVQLGIQGSYFCSQGCF KENWKKHKDVHAVFKLLQKNHEQQSPTGTDLAKYDPNDRNAWRNDAHLRNFLSFSFTGTL RPWPIVQCMRTVPAHIQQPDYARSGVPQSEVDSRRKSNVHVHSEEEIQRLRETCLLGRRA LDYAHSLVKPGVTTEEIDEKVHAFIVENGAYPSPLNYQQFPKSCCTSVNEVICHGIPDFR PLQDGDIVNVDITVYFKGMHGDLNETYFVGEKVDEDSKRLVKGAYECLMEAVKQCRPGMM YREVGRIVSDVADKYNLSVVRSYCGHGIGELFHTTPNVPHYRKNKAIGVMKPGHVFTIEP MINLGKSGDVLWPDNWTACTVDGQRSAQFEHTLLVTEEGVEILTKRLPSSPSLDFDTAGY DHP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_064990.fa Sequence name : NCLIV_064990 Sequence length : 423 VALUES OF COMPUTED PARAMETERS Coef20 : 3.985 CoefTot : 0.136 ChDiff : -7 ZoneTo : 23 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.088 1.071 0.298 0.471 MesoH : -0.799 -0.063 -0.424 0.148 MuHd_075 : 14.581 6.791 3.347 2.358 MuHd_095 : 15.440 14.800 4.009 4.238 MuHd_100 : 14.880 14.739 4.168 3.974 MuHd_105 : 13.835 13.479 3.837 3.542 Hmax_075 : 11.375 6.067 0.907 3.593 Hmax_095 : 11.900 9.713 1.126 3.920 Hmax_100 : 13.000 12.700 1.738 4.200 Hmax_105 : 10.200 10.000 1.376 3.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9484 0.0516 DFMC : 0.9511 0.0489
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 423 NCLIV_064990 MMAESASSPASTAAPSAPAGAQQDQVRCEGCGNLVKPELLCPTCVQLGIQGSYFCSQGCFKENWKKHKDVHAVFKLLQKN 80 HEQQSPTGTDLAKYDPNDRNAWRNDAHLRNFLSFSFTGTLRPWPIVQCMRTVPAHIQQPDYARSGVPQSEVDSRRKSNVH 160 VHSEEEIQRLRETCLLGRRALDYAHSLVKPGVTTEEIDEKVHAFIVENGAYPSPLNYQQFPKSCCTSVNEVICHGIPDFR 240 PLQDGDIVNVDITVYFKGMHGDLNETYFVGEKVDEDSKRLVKGAYECLMEAVKQCRPGMMYREVGRIVSDVADKYNLSVV 320 RSYCGHGIGELFHTTPNVPHYRKNKAIGVMKPGHVFTIEPMINLGKSGDVLWPDNWTACTVDGQRSAQFEHTLLVTEEGV 400 EILTKRLPSSPSLDFDTAGYDHP 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_064990 27 AQQDQVR|CE 0.108 . NCLIV_064990 36 GCGNLVK|PE 0.055 . NCLIV_064990 61 CSQGCFK|EN 0.067 . NCLIV_064990 65 CFKENWK|KH 0.057 . NCLIV_064990 66 FKENWKK|HK 0.103 . NCLIV_064990 68 ENWKKHK|DV 0.171 . NCLIV_064990 75 DVHAVFK|LL 0.073 . NCLIV_064990 79 VFKLLQK|NH 0.061 . NCLIV_064990 93 TGTDLAK|YD 0.065 . NCLIV_064990 99 KYDPNDR|NA 0.077 . NCLIV_064990 103 NDRNAWR|ND 0.086 . NCLIV_064990 109 RNDAHLR|NF 0.079 . NCLIV_064990 121 SFTGTLR|PW 0.087 . NCLIV_064990 130 PIVQCMR|TV 0.120 . NCLIV_064990 143 QQPDYAR|SG 0.104 . NCLIV_064990 154 QSEVDSR|RK 0.104 . NCLIV_064990 155 SEVDSRR|KS 0.157 . NCLIV_064990 156 EVDSRRK|SN 0.092 . NCLIV_064990 169 SEEEIQR|LR 0.085 . NCLIV_064990 171 EEIQRLR|ET 0.070 . NCLIV_064990 178 ETCLLGR|RA 0.081 . NCLIV_064990 179 TCLLGRR|AL 0.104 . NCLIV_064990 189 YAHSLVK|PG 0.058 . NCLIV_064990 200 TEEIDEK|VH 0.059 . NCLIV_064990 222 NYQQFPK|SC 0.102 . NCLIV_064990 240 HGIPDFR|PL 0.089 . NCLIV_064990 257 DITVYFK|GM 0.062 . NCLIV_064990 272 TYFVGEK|VD 0.059 . NCLIV_064990 278 KVDEDSK|RL 0.052 . NCLIV_064990 279 VDEDSKR|LV 0.290 . NCLIV_064990 282 DSKRLVK|GA 0.156 . NCLIV_064990 293 CLMEAVK|QC 0.066 . NCLIV_064990 296 EAVKQCR|PG 0.086 . NCLIV_064990 302 RPGMMYR|EV 0.224 . NCLIV_064990 306 MYREVGR|IV 0.166 . NCLIV_064990 314 VSDVADK|YN 0.064 . NCLIV_064990 321 YNLSVVR|SY 0.133 . NCLIV_064990 342 PNVPHYR|KN 0.115 . NCLIV_064990 343 NVPHYRK|NK 0.074 . NCLIV_064990 345 PHYRKNK|AI 0.239 . NCLIV_064990 351 KAIGVMK|PG 0.063 . NCLIV_064990 366 PMINLGK|SG 0.070 . NCLIV_064990 385 CTVDGQR|SA 0.100 . NCLIV_064990 405 GVEILTK|RL 0.056 . NCLIV_064990 406 VEILTKR|LP 0.108 . ____________________________^_________________

  • Fasta :-

    >NCLIV_064990 ATGATGGCGGAGTCTGCATCGTCTCCGGCCTCGACGGCGGCGCCTTCTGCGCCTGCAGGT GCTCAGCAGGACCAAGTTCGCTGCGAGGGCTGCGGAAATCTGGTGAAGCCCGAGCTTCTC TGCCCGACATGCGTCCAGCTGGGCATCCAGGGGAGTTATTTCTGCTCTCAGGGCTGCTTT AAGGAGAACTGGAAGAAACACAAAGACGTCCACGCCGTCTTCAAACTCCTCCAAAAAAAC CATGAGCAACAAAGCCCTACAGGCACCGACCTCGCGAAATATGATCCGAACGACAGAAAC GCGTGGCGCAACGATGCGCATCTCAGGAACTTCCTCTCCTTCTCCTTCACGGGGACTTTG CGGCCTTGGCCGATCGTCCAGTGCATGCGAACTGTCCCCGCCCACATCCAGCAGCCCGAC TACGCGCGCTCCGGCGTCCCGCAGTCAGAAGTCGACTCCCGGAGGAAGAGCAACGTCCAC GTGCACTCCGAGGAGGAAATTCAGCGTTTGCGCGAGACGTGCCTCTTAGGCCGACGCGCA CTCGACTACGCGCACAGCCTGGTGAAACCCGGTGTCACTACGGAGGAAATCGACGAGAAG GTCCACGCATTCATCGTCGAGAACGGCGCGTATCCTTCACCGCTGAATTACCAACAATTT CCAAAGTCGTGCTGCACGTCGGTCAACGAGGTTATCTGCCACGGCATCCCAGACTTCCGA CCTCTCCAGGACGGGGACATTGTGAACGTCGACATCACCGTTTACTTTAAGGGCATGCAT GGCGACTTAAATGAAACCTACTTCGTCGGAGAAAAAGTCGATGAAGACAGCAAACGCCTC GTCAAAGGCGCCTACGAGTGTCTCATGGAGGCGGTGAAGCAGTGCCGGCCGGGTATGATG TACCGCGAAGTGGGGCGGATTGTTTCCGACGTCGCTGACAAATACAACTTGTCGGTGGTT CGCTCCTACTGCGGTCACGGTATCGGGGAGTTGTTTCACACGACGCCAAATGTTCCGCAC TACAGAAAAAACAAAGCAATCGGGGTGATGAAGCCTGGACACGTCTTTACGATAGAGCCG ATGATCAACTTGGGCAAGTCTGGAGACGTTTTATGGCCGGATAACTGGACTGCATGCACC GTCGACGGCCAGCGGTCGGCGCAGTTCGAGCACACGCTTCTCGTCACAGAAGAGGGAGTG GAAATCCTCACAAAGAGACTTCCCTCGTCGCCATCCCTTGACTTCGACACCGCAGGCTAC GATCATCCTTAG
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  • Fasta :-

    MMAESASSPASTAAPSAPAGAQQDQVRCEGCGNLVKPELLCPTCVQLGIQGSYFCSQGCF KENWKKHKDVHAVFKLLQKNHEQQSPTGTDLAKYDPNDRNAWRNDAHLRNFLSFSFTGTL RPWPIVQCMRTVPAHIQQPDYARSGVPQSEVDSRRKSNVHVHSEEEIQRLRETCLLGRRA LDYAHSLVKPGVTTEEIDEKVHAFIVENGAYPSPLNYQQFPKSCCTSVNEVICHGIPDFR PLQDGDIVNVDITVYFKGMHGDLNETYFVGEKVDEDSKRLVKGAYECLMEAVKQCRPGMM YREVGRIVSDVADKYNLSVVRSYCGHGIGELFHTTPNVPHYRKNKAIGVMKPGHVFTIEP MINLGKSGDVLWPDNWTACTVDGQRSAQFEHTLLVTEEGVEILTKRLPSSPSLDFDTAGY DHP

  • title: active site
  • coordinates: H234,D251,D262,H326,E359,E390
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_064990163 SVHVHSEEEI0.991unspNCLIV_064990163 SVHVHSEEEI0.991unspNCLIV_064990163 SVHVHSEEEI0.991unspNCLIV_064990409 SKRLPSSPSL0.99unspNCLIV_0649908 SESASSPAST0.991unspNCLIV_064990149 SGVPQSEVDS0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India