NCLIV_068020 | putative OTU-like cysteine protease domain-containing protein

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_068020OTHER0.9998840.0000230.000092
No Results

  • Fasta :-

    >NCLIV_068020 MEVVVRCSNTRHRVTLPTEATVQDLLLRVRDLTGLSPSRQVLKIGYPPQPVSFGRDGDRR LVDAGVHPKDLIIVEERKAGTLSDSREGAPSLANGCGTGGALERVDGASGDRDLAKRRKE GDARSEERLHVPGVVASSTDTRTASHDANRFAGRLEGSATSACPARQTALSSPAGCTPQP SALGSASHPPTLSSSLPPGSTRLTDGPDAARAMPLAPHSAACENSREAQGQLRRSLQAQV AHPGNVGDVFRFVVPSDNSCLFTCLSLLAAPDKRPQDLRQLVASAIANDPESFSSAILGR PREEYIHWITTPTSWGGYVELAILAQQLRHEVLVVDIETRRKDLYGDRNTGRRIMLLYDG VHYDAVLARPRGVFLAGRGETEQSRGGAFFPVGPRGQELFCYSVFSPNDTETEAKAMELA SELHKKRNYVNLREMSLHCLVCGVGIRDQDAMRAHAKETGHANFGENRR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_068020.fa Sequence name : NCLIV_068020 Sequence length : 469 VALUES OF COMPUTED PARAMETERS Coef20 : 4.483 CoefTot : -0.220 ChDiff : 3 ZoneTo : 18 KR : 3 DE : 1 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.994 1.324 0.189 0.506 MesoH : -0.283 0.145 -0.270 0.142 MuHd_075 : 20.341 10.970 4.596 3.791 MuHd_095 : 25.549 13.117 7.457 4.284 MuHd_100 : 28.671 13.915 8.447 4.299 MuHd_105 : 27.235 14.466 8.559 4.127 Hmax_075 : 7.233 8.983 0.011 2.823 Hmax_095 : 10.200 9.400 1.054 3.310 Hmax_100 : 10.200 9.400 1.054 3.310 Hmax_105 : 12.600 14.933 4.007 4.270 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9402 0.0598 DFMC : 0.9429 0.0571
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 469 NCLIV_068020 MEVVVRCSNTRHRVTLPTEATVQDLLLRVRDLTGLSPSRQVLKIGYPPQPVSFGRDGDRRLVDAGVHPKDLIIVEERKAG 80 TLSDSREGAPSLANGCGTGGALERVDGASGDRDLAKRRKEGDARSEERLHVPGVVASSTDTRTASHDANRFAGRLEGSAT 160 SACPARQTALSSPAGCTPQPSALGSASHPPTLSSSLPPGSTRLTDGPDAARAMPLAPHSAACENSREAQGQLRRSLQAQV 240 AHPGNVGDVFRFVVPSDNSCLFTCLSLLAAPDKRPQDLRQLVASAIANDPESFSSAILGRPREEYIHWITTPTSWGGYVE 320 LAILAQQLRHEVLVVDIETRRKDLYGDRNTGRRIMLLYDGVHYDAVLARPRGVFLAGRGETEQSRGGAFFPVGPRGQELF 400 CYSVFSPNDTETEAKAMELASELHKKRNYVNLREMSLHCLVCGVGIRDQDAMRAHAKETGHANFGENRR 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_068020 6 -MEVVVR|CS 0.083 . NCLIV_068020 11 VRCSNTR|HR 0.079 . NCLIV_068020 13 CSNTRHR|VT 0.118 . NCLIV_068020 28 VQDLLLR|VR 0.064 . NCLIV_068020 30 DLLLRVR|DL 0.083 . NCLIV_068020 39 TGLSPSR|QV 0.104 . NCLIV_068020 43 PSRQVLK|IG 0.067 . NCLIV_068020 55 QPVSFGR|DG 0.131 . NCLIV_068020 59 FGRDGDR|RL 0.090 . NCLIV_068020 60 GRDGDRR|LV 0.322 . NCLIV_068020 69 DAGVHPK|DL 0.093 . NCLIV_068020 77 LIIVEER|KA 0.108 . NCLIV_068020 78 IIVEERK|AG 0.068 . NCLIV_068020 86 GTLSDSR|EG 0.067 . NCLIV_068020 104 TGGALER|VD 0.105 . NCLIV_068020 112 DGASGDR|DL 0.085 . NCLIV_068020 116 GDRDLAK|RR 0.069 . NCLIV_068020 117 DRDLAKR|RK 0.148 . NCLIV_068020 118 RDLAKRR|KE 0.175 . NCLIV_068020 119 DLAKRRK|EG 0.083 . NCLIV_068020 124 RKEGDAR|SE 0.115 . NCLIV_068020 128 DARSEER|LH 0.087 . NCLIV_068020 142 ASSTDTR|TA 0.137 . NCLIV_068020 150 ASHDANR|FA 0.204 . NCLIV_068020 154 ANRFAGR|LE 0.107 . NCLIV_068020 166 TSACPAR|QT 0.116 . NCLIV_068020 202 LPPGSTR|LT 0.087 . NCLIV_068020 211 DGPDAAR|AM 0.074 . NCLIV_068020 226 AACENSR|EA 0.112 . NCLIV_068020 233 EAQGQLR|RS 0.086 . NCLIV_068020 234 AQGQLRR|SL 0.264 . NCLIV_068020 251 NVGDVFR|FV 0.183 . NCLIV_068020 273 LLAAPDK|RP 0.062 . NCLIV_068020 274 LAAPDKR|PQ 0.134 . NCLIV_068020 279 KRPQDLR|QL 0.096 . NCLIV_068020 300 SSAILGR|PR 0.138 . NCLIV_068020 302 AILGRPR|EE 0.074 . NCLIV_068020 329 ILAQQLR|HE 0.079 . NCLIV_068020 340 VVDIETR|RK 0.070 . NCLIV_068020 341 VDIETRR|KD 0.092 . NCLIV_068020 342 DIETRRK|DL 0.091 . NCLIV_068020 348 KDLYGDR|NT 0.083 . NCLIV_068020 352 GDRNTGR|RI 0.096 . NCLIV_068020 353 DRNTGRR|IM 0.104 . NCLIV_068020 369 YDAVLAR|PR 0.116 . NCLIV_068020 371 AVLARPR|GV 0.122 . NCLIV_068020 378 GVFLAGR|GE 0.081 . NCLIV_068020 385 GETEQSR|GG 0.073 . NCLIV_068020 395 FFPVGPR|GQ 0.068 . NCLIV_068020 415 DTETEAK|AM 0.063 . NCLIV_068020 425 LASELHK|KR 0.061 . NCLIV_068020 426 ASELHKK|RN 0.125 . NCLIV_068020 427 SELHKKR|NY 0.173 . NCLIV_068020 433 RNYVNLR|EM 0.079 . NCLIV_068020 447 VCGVGIR|DQ 0.107 . NCLIV_068020 453 RDQDAMR|AH 0.094 . NCLIV_068020 457 AMRAHAK|ET 0.121 . NCLIV_068020 468 ANFGENR|R- 0.082 . NCLIV_068020 469 NFGENRR|-- 0.125 . ____________________________^_________________

  • Fasta :-

    >NCLIV_068020 ATGGAGGTGGTTGTGCGATGCAGTAACACCCGCCACAGAGTGACGCTTCCGACTGAGGCG ACGGTTCAAGACTTGCTTCTTCGCGTTCGCGACTTGACCGGCCTCAGCCCCTCGCGGCAG GTGCTCAAGATCGGCTATCCGCCGCAGCCTGTCTCCTTCGGCCGAGACGGCGACCGGAGG CTGGTTGACGCCGGCGTGCACCCGAAGGATTTGATTATCGTGGAGGAGAGAAAGGCGGGG ACTCTTTCCGATTCGCGCGAGGGAGCGCCCTCGTTGGCGAATGGCTGTGGCACGGGCGGC GCACTCGAGAGGGTGGACGGCGCGTCCGGAGATCGCGACCTCGCCAAGCGCAGAAAAGAA GGTGATGCGAGAAGCGAAGAGCGACTGCATGTGCCAGGAGTCGTGGCCTCGTCGACAGAC ACCCGGACCGCTTCTCATGATGCAAATCGTTTCGCGGGGAGACTGGAGGGGTCTGCTACC TCGGCCTGTCCCGCGCGCCAAACTGCGCTGTCGTCTCCCGCTGGATGTACGCCCCAGCCG AGCGCGTTGGGGTCGGCGAGTCACCCGCCCACACTTTCTTCTTCGCTTCCGCCGGGAAGC ACGCGCCTGACGGATGGTCCCGACGCGGCGCGAGCGATGCCTCTTGCTCCGCATTCTGCT GCGTGTGAGAACTCGAGGGAGGCGCAAGGACAGCTGAGACGGTCTTTGCAGGCCCAAGTG GCCCATCCGGGGAATGTCGGAGACGTGTTTCGCTTCGTTGTACCCTCCGACAACAGCTGC TTGTTCACCTGCTTGTCGCTGTTGGCGGCTCCAGACAAACGGCCGCAAGACTTGCGGCAG CTCGTGGCGTCGGCGATTGCGAACGATCCTGAGTCGTTCTCGAGCGCCATTCTCGGGCGG CCGCGCGAGGAGTACATACACTGGATCACCACGCCGACGAGCTGGGGCGGGTACGTGGAG CTGGCGATTCTCGCGCAGCAGCTGCGACACGAAGTGCTCGTGGTGGACATCGAGACGCGG CGGAAAGACCTCTACGGCGACCGCAACACAGGGCGGAGAATCATGCTCCTGTACGACGGC GTGCACTACGACGCTGTTCTCGCCCGCCCCCGAGGGGTGTTTTTGGCGGGTCGAGGCGAG ACGGAGCAAAGCAGAGGCGGGGCGTTCTTTCCCGTCGGCCCGCGAGGCCAGGAGCTCTTC TGCTACTCCGTCTTTTCCCCCAACGACACAGAGACCGAGGCAAAAGCCATGGAACTTGCC TCCGAACTGCACAAGAAAAGGAACTACGTGAACCTCAGGGAAATGAGTCTCCACTGCCTC GTGTGTGGGGTCGGCATTCGAGACCAGGATGCGATGCGAGCACACGCGAAAGAAACCGGA CACGCCAACTTCGGCGAAAACCGAAGATAG
  • Download Fasta

  • Fasta :-

    MEVVVRCSNTRHRVTLPTEATVQDLLLRVRDLTGLSPSRQVLKIGYPPQPVSFGRDGDRR LVDAGVHPKDLIIVEERKAGTLSDSREGAPSLANGCGTGGALERVDGASGDRDLAKRRKE GDARSEERLHVPGVVASSTDTRTASHDANRFAGRLEGSATSACPARQTALSSPAGCTPQP SALGSASHPPTLSSSLPPGSTRLTDGPDAARAMPLAPHSAACENSREAQGQLRRSLQAQV AHPGNVGDVFRFVVPSDNSCLFTCLSLLAAPDKRPQDLRQLVASAIANDPESFSSAILGR PREEYIHWITTPTSWGGYVELAILAQQLRHEVLVVDIETRRKDLYGDRNTGRRIMLLYDG VHYDAVLARPRGVFLAGRGETEQSRGGAFFPVGPRGQELFCYSVFSPNDTETEAKAMELA SELHKKRNYVNLREMSLHCLVCGVGIRDQDAMRAHAKETGHANFGENRR

  • title: VCP interaction site
  • coordinates: V4,R13,K43,Y46,P48,P50,H67,P68,K69,D70,L71,E75
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_068020137 SGVVASSTDT0.991unspNCLIV_068020137 SGVVASSTDT0.991unspNCLIV_068020137 SGVVASSTDT0.991unspNCLIV_068020406 SYSVFSPNDT0.996unspNCLIV_06802036 SLTGLSPSRQ0.99unspNCLIV_06802085 STLSDSREGA0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India