NCLIV_068380 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
NCLIV_068380OTHER0.9999620.0000060.000032
No Results

  • Fasta :-

    >NCLIV_068380 MANEKETETKQAGAGSERPKVAKNGAQDDEEPKKTIPLDEADINILKSYGLSPYAFAIKR LDTDIKGLSEKITKLCGVRESDTGLCPPSQWDLAADKQLMQEQPLQVARCTKIIYPGGQA PQRNADGGNANGEAGRAGESRPASEGVGASSFGAGAGEDEEPKYIINVKQIAKFVVGLGE KVAAMDIEEGMRVGVDRNKYKIQIPLPPKIDPTVTMMTVEEKPDVTYNDVGGAKEQLEKL REVLELPLLHPERFLSLGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQ KYVGEGARMVRELFQMARSRRACILFIDEVDAIGGSRGSEGEGNAHGDHEVQRTMLEIVN QLDGFEARGNIKVLMATNRPDTLDPALLRPGRLDRKIEFGLPDLEGRTHIFKIHAKTLSV DRNIRYELLARLCPNSTGADIRSVCTEAGILAIRARKKSISEKNFIDAINRVIKGYKKFS ATAKYMVYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_068380.fa Sequence name : NCLIV_068380 Sequence length : 489 VALUES OF COMPUTED PARAMETERS Coef20 : 3.030 CoefTot : 0.007 ChDiff : 1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.406 1.247 0.094 0.446 MesoH : -0.820 0.308 -0.349 0.169 MuHd_075 : 16.837 5.808 2.898 2.595 MuHd_095 : 17.547 8.051 4.106 3.508 MuHd_100 : 21.055 10.370 5.257 3.867 MuHd_105 : 19.182 8.855 5.396 3.075 Hmax_075 : -10.587 -5.688 -5.451 -0.590 Hmax_095 : -6.650 -3.325 -4.209 -0.096 Hmax_100 : 0.600 -0.300 -2.368 0.630 Hmax_105 : -2.567 -2.100 -2.275 0.875 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9899 0.0101 DFMC : 0.9840 0.0160
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 489 NCLIV_068380 MANEKETETKQAGAGSERPKVAKNGAQDDEEPKKTIPLDEADINILKSYGLSPYAFAIKRLDTDIKGLSEKITKLCGVRE 80 SDTGLCPPSQWDLAADKQLMQEQPLQVARCTKIIYPGGQAPQRNADGGNANGEAGRAGESRPASEGVGASSFGAGAGEDE 160 EPKYIINVKQIAKFVVGLGEKVAAMDIEEGMRVGVDRNKYKIQIPLPPKIDPTVTMMTVEEKPDVTYNDVGGAKEQLEKL 240 REVLELPLLHPERFLSLGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQKYVGEGARMVRELFQMARSR 320 RACILFIDEVDAIGGSRGSEGEGNAHGDHEVQRTMLEIVNQLDGFEARGNIKVLMATNRPDTLDPALLRPGRLDRKIEFG 400 LPDLEGRTHIFKIHAKTLSVDRNIRYELLARLCPNSTGADIRSVCTEAGILAIRARKKSISEKNFIDAINRVIKGYKKFS 480 ATAKYMVYN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ......... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_068380 5 --MANEK|ET 0.072 . NCLIV_068380 10 EKETETK|QA 0.090 . NCLIV_068380 18 AGAGSER|PK 0.086 . NCLIV_068380 20 AGSERPK|VA 0.078 . NCLIV_068380 23 ERPKVAK|NG 0.069 . NCLIV_068380 33 QDDEEPK|KT 0.062 . NCLIV_068380 34 DDEEPKK|TI 0.090 . NCLIV_068380 47 ADINILK|SY 0.075 . NCLIV_068380 59 PYAFAIK|RL 0.065 . NCLIV_068380 60 YAFAIKR|LD 0.139 . NCLIV_068380 66 RLDTDIK|GL 0.079 . NCLIV_068380 71 IKGLSEK|IT 0.063 . NCLIV_068380 74 LSEKITK|LC 0.068 . NCLIV_068380 79 TKLCGVR|ES 0.097 . NCLIV_068380 97 WDLAADK|QL 0.070 . NCLIV_068380 109 QPLQVAR|CT 0.132 . NCLIV_068380 112 QVARCTK|II 0.195 . NCLIV_068380 123 GGQAPQR|NA 0.139 . NCLIV_068380 136 ANGEAGR|AG 0.088 . NCLIV_068380 141 GRAGESR|PA 0.218 . NCLIV_068380 163 GEDEEPK|YI 0.068 . NCLIV_068380 169 KYIINVK|QI 0.069 . NCLIV_068380 173 NVKQIAK|FV 0.077 . NCLIV_068380 181 VVGLGEK|VA 0.055 . NCLIV_068380 192 DIEEGMR|VG 0.062 . NCLIV_068380 197 MRVGVDR|NK 0.128 . NCLIV_068380 199 VGVDRNK|YK 0.065 . NCLIV_068380 201 VDRNKYK|IQ 0.072 . NCLIV_068380 209 QIPLPPK|ID 0.061 . NCLIV_068380 222 MMTVEEK|PD 0.061 . NCLIV_068380 234 NDVGGAK|EQ 0.060 . NCLIV_068380 239 AKEQLEK|LR 0.059 . NCLIV_068380 241 EQLEKLR|EV 0.094 . NCLIV_068380 253 PLLHPER|FL 0.114 . NCLIV_068380 263 LGIDPPK|GV 0.076 . NCLIV_068380 275 GPPGTGK|TL 0.062 . NCLIV_068380 280 GKTLTAR|AV 0.113 . NCLIV_068380 285 ARAVANR|TD 0.087 . NCLIV_068380 301 GSELVQK|YV 0.154 . NCLIV_068380 308 YVGEGAR|MV 0.138 . NCLIV_068380 311 EGARMVR|EL 0.260 . NCLIV_068380 318 ELFQMAR|SR 0.114 . NCLIV_068380 320 FQMARSR|RA 0.102 . NCLIV_068380 321 QMARSRR|AC 0.476 . NCLIV_068380 337 DAIGGSR|GS 0.100 . NCLIV_068380 353 GDHEVQR|TM 0.112 . NCLIV_068380 368 LDGFEAR|GN 0.160 . NCLIV_068380 372 EARGNIK|VL 0.059 . NCLIV_068380 379 VLMATNR|PD 0.076 . NCLIV_068380 389 LDPALLR|PG 0.069 . NCLIV_068380 392 ALLRPGR|LD 0.247 . NCLIV_068380 395 RPGRLDR|KI 0.456 . NCLIV_068380 396 PGRLDRK|IE 0.069 . NCLIV_068380 407 LPDLEGR|TH 0.084 . NCLIV_068380 412 GRTHIFK|IH 0.062 . NCLIV_068380 416 IFKIHAK|TL 0.073 . NCLIV_068380 422 KTLSVDR|NI 0.084 . NCLIV_068380 425 SVDRNIR|YE 0.147 . NCLIV_068380 431 RYELLAR|LC 0.069 . NCLIV_068380 442 STGADIR|SV 0.251 . NCLIV_068380 454 AGILAIR|AR 0.074 . NCLIV_068380 456 ILAIRAR|KK 0.162 . NCLIV_068380 457 LAIRARK|KS 0.166 . NCLIV_068380 458 AIRARKK|SI 0.238 . NCLIV_068380 463 KKSISEK|NF 0.089 . NCLIV_068380 471 FIDAINR|VI 0.071 . NCLIV_068380 474 AINRVIK|GY 0.163 . NCLIV_068380 477 RVIKGYK|KF 0.067 . NCLIV_068380 478 VIKGYKK|FS 0.100 . NCLIV_068380 484 KFSATAK|YM 0.076 . ____________________________^_________________

  • Fasta :-

    >NCLIV_068380 ATGGCGAATGAGAAGGAGACAGAGACCAAGCAGGCTGGGGCGGGCTCGGAGCGGCCGAAG GTGGCGAAGAACGGCGCTCAGGACGATGAAGAGCCGAAAAAAACCATTCCTCTCGACGAA GCAGACATCAACATCCTCAAGTCTTACGGTTTGTCTCCCTACGCCTTTGCGATTAAGCGC CTGGACACCGACATCAAGGGTTTGTCCGAGAAGATCACCAAGCTGTGTGGAGTTCGCGAA AGCGACACGGGGCTCTGTCCGCCGTCGCAGTGGGATCTGGCTGCCGACAAGCAGCTGATG CAGGAACAGCCTTTGCAAGTCGCGCGGTGCACGAAAATCATCTACCCTGGCGGCCAGGCG CCTCAGCGCAACGCAGACGGGGGCAACGCGAACGGCGAGGCCGGGCGAGCTGGCGAGAGC CGGCCTGCCTCAGAGGGCGTCGGGGCGTCGTCCTTTGGGGCTGGTGCCGGAGAAGACGAA GAACCGAAATACATCATCAACGTGAAGCAAATCGCAAAGTTCGTCGTCGGCCTCGGCGAG AAAGTCGCTGCGATGGACATCGAAGAAGGCATGCGAGTCGGAGTCGACCGCAACAAGTAC AAAATCCAAATTCCGCTTCCGCCCAAGATTGACCCTACAGTCACCATGATGACAGTCGAA GAGAAGCCGGATGTGACTTACAACGACGTCGGCGGCGCGAAGGAGCAACTCGAGAAGCTG CGAGAAGTCCTCGAACTTCCTCTGCTTCATCCGGAGAGATTCCTCTCTCTCGGCATCGAT CCGCCCAAGGGCGTCCTGCTCTACGGGCCACCAGGGACGGGGAAAACGCTCACGGCCCGC GCCGTCGCAAATCGAACAGATGCATGCTTCATCTGCGTCATCGGCTCCGAACTTGTGCAA AAGTACGTCGGCGAGGGGGCTCGAATGGTGCGAGAGCTCTTTCAGATGGCGCGCAGCAGA CGCGCATGCATTTTATTCATCGACGAGGTGGACGCGATCGGCGGAAGCCGAGGGAGCGAG GGCGAGGGGAATGCTCACGGTGACCACGAAGTGCAAAGAACGATGCTCGAAATTGTGAAT CAGCTAGATGGCTTCGAAGCTCGTGGAAACATCAAAGTTCTCATGGCCACCAACCGTCCA GACACCCTGGACCCAGCCCTGCTTCGTCCCGGCCGTCTCGACAGAAAGATCGAGTTCGGT CTTCCGGACCTCGAGGGAAGAACACACATCTTCAAGATTCATGCAAAGACTCTCAGCGTC GATCGCAACATCCGCTACGAACTCCTCGCCCGCCTGTGCCCCAACAGCACAGGCGCTGAC ATCCGCTCTGTTTGTACAGAGGCAGGCATCTTGGCCATTCGCGCCAGAAAGAAGAGCATC AGCGAGAAAAACTTCATCGATGCCATCAACCGAGTCATCAAAGGGTACAAAAAGTTCAGT GCGACTGCCAAGTATATGGTCTACAACTGA
  • Download Fasta

  • Fasta :-

    MANEKETETKQAGAGSERPKVAKNGAQDDEEPKKTIPLDEADINILKSYGLSPYAFAIKR LDTDIKGLSEKITKLCGVRESDTGLCPPSQWDLAADKQLMQEQPLQVARCTKIIYPGGQA PQRNADGGNANGEAGRAGESRPASEGVGASSFGAGAGEDEEPKYIINVKQIAKFVVGLGE KVAAMDIEEGMRVGVDRNKYKIQIPLPPKIDPTVTMMTVEEKPDVTYNDVGGAKEQLEKL REVLELPLLHPERFLSLGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQ KYVGEGARMVRELFQMARSRRACILFIDEVDAIGGSRGSEGEGNAHGDHEVQRTMLEIVN QLDGFEARGNIKVLMATNRPDTLDPALLRPGRLDRKIEFGLPDLEGRTHIFKIHAKTLSV DRNIRYELLARLCPNSTGADIRSVCTEAGILAIRARKKSISEKNFIDAINRVIKGYKKFS ATAKYMVYN

  • title: ATP binding site
  • coordinates: P270,P271,G272,T273,G274,K275,T276,L277,D328,N378
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_068380164 YEEPKYIINV0.99unspNCLIV_068380164 YEEPKYIINV0.99unspNCLIV_068380164 YEEPKYIINV0.99unspNCLIV_068380339 SGSRGSEGEG0.994unspNCLIV_068380459 SARKKSISEK0.995unspNCLIV_068380461 SKKSISEKNF0.996unspNCLIV_06838069 SIKGLSEKIT0.992unspNCLIV_068380144 SSRPASEGVG0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India