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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0000250.fa
Sequence name : NF0000250
Sequence length : 443
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.138
CoefTot : -1.089
ChDiff : -1
ZoneTo : 27
KR : 7
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.000 0.982 0.028 0.456
MesoH : -0.789 0.143 -0.439 0.182
MuHd_075 : 24.824 10.569 6.796 4.104
MuHd_095 : 32.084 12.161 9.490 5.324
MuHd_100 : 31.142 13.175 10.089 5.761
MuHd_105 : 33.268 12.901 10.853 5.869
Hmax_075 : 9.275 0.875 -0.130 1.461
Hmax_095 : 9.100 -5.900 -2.297 1.925
Hmax_100 : 6.400 -0.600 -0.149 1.420
Hmax_105 : 7.000 -2.333 -0.035 1.867
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.2781 0.7219
DFMC : 0.1101 0.8899
This protein is probably imported in chloroplast.
f(Ser) = 0.1481 f(Arg) = 0.0000 CMi = 2.11640
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
443 NF0000250
MTKKSSAATSTTGNKPAKASKQGNNKKDDDLSFLLEMQKKNEKEMAEQKSQGTAGEKKKKQTPKEYPSEQTQPEPTVPIK 80
YLFKDNNFPQGEIQPLQFYEHRTKRFSARELDAGAEARDEKLQERIRDARHAAEVHRTARKWFKEHVVRPGMRVIDAAEA 160
YENKVRELIEADKNNRKGGLAFPLGCSMNYVAAHYTPNTGDETVIGKDDVIKFDLGTHVNGTIIDSAFTLCWNDQYKPLL 240
EAVKDATNTGCKVAGIDVRLGDVGAAIQEVMESYEVTIDGKTYQVRSISNLCGHSVERYRVHAGKTVPIVACEENEKMEE 320
NEFFAIETFGSTGRGSIEEEGVTSHYGKNHDYKGDGSELRNKESRELLKVINENFGSLPFCRRYLDRIGQKKYLTALRDL 400
VNNGIVNEYPPLADVRGCYTAQFEHTILLRPTCKEVLSRGSDY 480
................................................................................ 80
........................P....................................................... 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
........................................... 480
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1
Name Pos Context Score Pred
____________________________v_________________
NF0000250 3 ----MTK|KS 0.072 .
NF0000250 4 ---MTKK|SS 0.141 .
NF0000250 15 TSTTGNK|PA 0.067 .
NF0000250 18 TGNKPAK|AS 0.094 .
NF0000250 21 KPAKASK|QG 0.067 .
NF0000250 26 SKQGNNK|KD 0.063 .
NF0000250 27 KQGNNKK|DD 0.137 .
NF0000250 39 FLLEMQK|KN 0.061 .
NF0000250 40 LLEMQKK|NE 0.090 .
NF0000250 43 MQKKNEK|EM 0.062 .
NF0000250 49 KEMAEQK|SQ 0.099 .
NF0000250 57 QGTAGEK|KK 0.055 .
NF0000250 58 GTAGEKK|KK 0.085 .
NF0000250 59 TAGEKKK|KQ 0.133 .
NF0000250 60 AGEKKKK|QT 0.141 .
NF0000250 64 KKKQTPK|EY 0.082 .
NF0000250 80 EPTVPIK|YL 0.073 .
NF0000250 84 PIKYLFK|DN 0.064 .
NF0000250 102 LQFYEHR|TK 0.079 .
NF0000250 104 FYEHRTK|RF 0.063 .
NF0000250 105 YEHRTKR|FS 0.715 *ProP*
NF0000250 109 TKRFSAR|EL 0.245 .
NF0000250 118 DAGAEAR|DE 0.123 .
NF0000250 121 AEARDEK|LQ 0.128 .
NF0000250 125 DEKLQER|IR 0.078 .
NF0000250 127 KLQERIR|DA 0.126 .
NF0000250 130 ERIRDAR|HA 0.449 .
NF0000250 137 HAAEVHR|TA 0.139 .
NF0000250 140 EVHRTAR|KW 0.393 .
NF0000250 141 VHRTARK|WF 0.079 .
NF0000250 144 TARKWFK|EH 0.068 .
NF0000250 149 FKEHVVR|PG 0.099 .
NF0000250 153 VVRPGMR|VI 0.128 .
NF0000250 164 AEAYENK|VR 0.061 .
NF0000250 166 AYENKVR|EL 0.091 .
NF0000250 173 ELIEADK|NN 0.065 .
NF0000250 176 EADKNNR|KG 0.079 .
NF0000250 177 ADKNNRK|GG 0.072 .
NF0000250 207 DETVIGK|DD 0.062 .
NF0000250 212 GKDDVIK|FD 0.062 .
NF0000250 237 CWNDQYK|PL 0.072 .
NF0000250 244 PLLEAVK|DA 0.068 .
NF0000250 252 ATNTGCK|VA 0.068 .
NF0000250 259 VAGIDVR|LG 0.080 .
NF0000250 281 EVTIDGK|TY 0.053 .
NF0000250 286 GKTYQVR|SI 0.172 .
NF0000250 298 CGHSVER|YR 0.100 .
NF0000250 300 HSVERYR|VH 0.076 .
NF0000250 305 YRVHAGK|TV 0.089 .
NF0000250 317 ACEENEK|ME 0.062 .
NF0000250 334 TFGSTGR|GS 0.112 .
NF0000250 348 VTSHYGK|NH 0.091 .
NF0000250 353 GKNHDYK|GD 0.108 .
NF0000250 360 GDGSELR|NK 0.085 .
NF0000250 362 GSELRNK|ES 0.062 .
NF0000250 365 LRNKESR|EL 0.132 .
NF0000250 369 ESRELLK|VI 0.069 .
NF0000250 382 GSLPFCR|RY 0.095 .
NF0000250 383 SLPFCRR|YL 0.177 .
NF0000250 387 CRRYLDR|IG 0.109 .
NF0000250 391 LDRIGQK|KY 0.066 .
NF0000250 392 DRIGQKK|YL 0.145 .
NF0000250 398 KYLTALR|DL 0.079 .
NF0000250 416 PPLADVR|GC 0.102 .
NF0000250 430 EHTILLR|PT 0.082 .
NF0000250 434 LLRPTCK|EV 0.071 .
NF0000250 439 CKEVLSR|GS 0.106 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation