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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0003240.fa
Sequence name : NF0003240
Sequence length : 400
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.580
CoefTot : -0.951
ChDiff : 0
ZoneTo : 71
KR : 5
DE : 0
CleavSite : 69
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.453 2.388 0.405 0.801
MesoH : 0.000 0.619 -0.257 0.280
MuHd_075 : 35.473 21.214 10.067 7.406
MuHd_095 : 25.082 18.830 7.490 6.882
MuHd_100 : 29.357 20.780 7.834 8.311
MuHd_105 : 25.924 20.734 7.710 7.801
Hmax_075 : 10.733 25.400 3.436 3.558
Hmax_095 : 7.700 20.300 3.411 2.460
Hmax_100 : 8.500 15.900 -0.333 3.850
Hmax_105 : 9.700 16.200 -0.484 5.580
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.5328 0.4672
DFMC : 0.1207 0.8793
This protein is probably imported in mitochondria.
f(Ser) = 0.1127 f(Arg) = 0.0704 CMi = 0.66834
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
400 NF0003240
MSPCLLRSVVVVVAHRSPGRNHQSGWSVLHSVMSLLFFTSLLLTLFVAATIPNNNNIFVIGHPVMIRGRVGEGREERIKQ 80
EHEFYSSSSSSTRRLTRTATTTTITALNNRPIIGILAQPTSNKEHGESYIAASYVKWIEGSGARVVPIPYDLPQETLQYL 160
FQSLNGLLFPGGGTNIKHSKYADVLKFFFDKVIEANARGDYFPLWGTCLGFESLNILAAENNEVVNYGFDSEDLSLSLKF 240
VSDFRNSRLFGSAPNEILEILAQQNVTMNNHMAGVTPFDYERNEKLRKFFKILSLNADRKGKTFVSTIESFNFPIYGTQY 320
HPEKVYEFNYEVIDHSFDSLIANEYFGQFFVNEARKSQRKFPSFEEEEKYLIYNFSPKFTFPRISKDFMQIYYFNATSTI 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0003240 7 MSPCLLR|SV 0.168 .
NF0003240 16 VVVVAHR|SP 0.110 .
NF0003240 20 AHRSPGR|NH 0.083 .
NF0003240 67 GHPVMIR|GR 0.084 .
NF0003240 69 PVMIRGR|VG 0.082 .
NF0003240 74 GRVGEGR|EE 0.114 .
NF0003240 77 GEGREER|IK 0.275 .
NF0003240 79 GREERIK|QE 0.064 .
NF0003240 93 SSSSSTR|RL 0.113 .
NF0003240 94 SSSSTRR|LT 0.243 .
NF0003240 97 STRRLTR|TA 0.331 .
NF0003240 110 ITALNNR|PI 0.114 .
NF0003240 123 AQPTSNK|EH 0.064 .
NF0003240 136 IAASYVK|WI 0.078 .
NF0003240 144 IEGSGAR|VV 0.084 .
NF0003240 177 GGGTNIK|HS 0.059 .
NF0003240 180 TNIKHSK|YA 0.094 .
NF0003240 186 KYADVLK|FF 0.078 .
NF0003240 191 LKFFFDK|VI 0.072 .
NF0003240 198 VIEANAR|GD 0.083 .
NF0003240 239 DLSLSLK|FV 0.103 .
NF0003240 245 KFVSDFR|NS 0.070 .
NF0003240 248 SDFRNSR|LF 0.227 .
NF0003240 282 TPFDYER|NE 0.065 .
NF0003240 285 DYERNEK|LR 0.070 .
NF0003240 287 ERNEKLR|KF 0.139 .
NF0003240 288 RNEKLRK|FF 0.075 .
NF0003240 291 KLRKFFK|IL 0.071 .
NF0003240 299 LSLNADR|KG 0.071 .
NF0003240 300 SLNADRK|GK 0.091 .
NF0003240 302 NADRKGK|TF 0.116 .
NF0003240 324 TQYHPEK|VY 0.066 .
NF0003240 355 FFVNEAR|KS 0.088 .
NF0003240 356 FVNEARK|SQ 0.104 .
NF0003240 359 EARKSQR|KF 0.098 .
NF0003240 360 ARKSQRK|FP 0.117 .
NF0003240 369 SFEEEEK|YL 0.061 .
NF0003240 378 IYNFSPK|FT 0.079 .
NF0003240 383 PKFTFPR|IS 0.095 .
NF0003240 386 TFPRISK|DF 0.165 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation