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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0005860.fa
Sequence name : NF0005860
Sequence length : 441
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.536
CoefTot : -0.559
ChDiff : 8
ZoneTo : 46
KR : 7
DE : 0
CleavSite : 46
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.353 1.247 0.210 0.530
MesoH : -0.315 0.288 -0.310 0.223
MuHd_075 : 46.042 30.527 14.216 10.522
MuHd_095 : 42.822 29.959 12.675 9.557
MuHd_100 : 40.515 29.920 12.090 9.430
MuHd_105 : 31.058 26.527 9.964 7.579
Hmax_075 : 9.333 12.833 0.741 4.480
Hmax_095 : 14.800 18.200 3.073 5.140
Hmax_100 : 12.800 18.200 2.233 5.140
Hmax_105 : 15.800 16.500 2.744 5.140
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0079 0.9921
DFMC : 0.0142 0.9858
This protein is probably imported in chloroplast.
f(Ser) = 0.1957 f(Arg) = 0.0435 CMi = 1.49502
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
441 NF0005860
MLSSSRTLLQQLNTSSKGVSKNVGIIGLLANKNISRQFSTHSVQKKEQMVEFNWKDPLNVESLLTDEEKEIRDQARNYCQ 80
SKLMPRILEANRKEFFDREILREMGEMGMLGITIQGYGCAGASQVSYGLVAREVERVDSGYRSAMSVQSSLVMHPINTFG 160
SEEQKQKYLPRLATGEIVGCFGLTEPNHGSDPGSMETKAKKSSCGKYYILNGSKMWITNSPIADIFVVWAKNLEEGGKIR 240
GFILEKGMKGLTAPKIEGKMSLRASITGSISMDDVHVPVENMLPKAMGLSGPFSCLNSARYGIAWGALGAAEFCFETARQ 320
YQLDRKQFGKPLAQNQLPQKKMADMLTEITLGLVSCVQLGRLKEKGEWAPEMISMLKRNNAGKALEIARICRDMLGGNGI 400
ADEYHVIRHAANLESVNTYEGTHDIHALILGRAITGLQAFK 480
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
......................................... 480
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0005860 6 -MLSSSR|TL 0.087 .
NF0005860 17 QLNTSSK|GV 0.111 .
NF0005860 21 SSKGVSK|NV 0.107 .
NF0005860 32 IGLLANK|NI 0.064 .
NF0005860 36 ANKNISR|QF 0.097 .
NF0005860 45 STHSVQK|KE 0.072 .
NF0005860 46 THSVQKK|EQ 0.176 .
NF0005860 55 MVEFNWK|DP 0.070 .
NF0005860 69 LLTDEEK|EI 0.068 .
NF0005860 72 DEEKEIR|DQ 0.084 .
NF0005860 76 EIRDQAR|NY 0.155 .
NF0005860 82 RNYCQSK|LM 0.065 .
NF0005860 86 QSKLMPR|IL 0.112 .
NF0005860 92 RILEANR|KE 0.064 .
NF0005860 93 ILEANRK|EF 0.085 .
NF0005860 98 RKEFFDR|EI 0.122 .
NF0005860 102 FDREILR|EM 0.101 .
NF0005860 132 SYGLVAR|EV 0.170 .
NF0005860 136 VAREVER|VD 0.093 .
NF0005860 142 RVDSGYR|SA 0.136 .
NF0005860 165 FGSEEQK|QK 0.060 .
NF0005860 167 SEEQKQK|YL 0.072 .
NF0005860 171 KQKYLPR|LA 0.127 .
NF0005860 198 PGSMETK|AK 0.065 .
NF0005860 200 SMETKAK|KS 0.080 .
NF0005860 201 METKAKK|SS 0.162 .
NF0005860 206 KKSSCGK|YY 0.074 .
NF0005860 214 YILNGSK|MW 0.057 .
NF0005860 231 IFVVWAK|NL 0.080 .
NF0005860 238 NLEEGGK|IR 0.066 .
NF0005860 240 EEGGKIR|GF 0.104 .
NF0005860 246 RGFILEK|GM 0.056 .
NF0005860 249 ILEKGMK|GL 0.062 .
NF0005860 255 KGLTAPK|IE 0.057 .
NF0005860 259 APKIEGK|MS 0.065 .
NF0005860 263 EGKMSLR|AS 0.092 .
NF0005860 285 VENMLPK|AM 0.080 .
NF0005860 300 SCLNSAR|YG 0.112 .
NF0005860 319 FCFETAR|QY 0.083 .
NF0005860 325 RQYQLDR|KQ 0.082 .
NF0005860 326 QYQLDRK|QF 0.095 .
NF0005860 330 DRKQFGK|PL 0.076 .
NF0005860 340 QNQLPQK|KM 0.066 .
NF0005860 341 NQLPQKK|MA 0.115 .
NF0005860 361 SCVQLGR|LK 0.112 .
NF0005860 363 VQLGRLK|EK 0.059 .
NF0005860 365 LGRLKEK|GE 0.080 .
NF0005860 377 EMISMLK|RN 0.058 .
NF0005860 378 MISMLKR|NN 0.220 .
NF0005860 383 KRNNAGK|AL 0.097 .
NF0005860 389 KALEIAR|IC 0.102 .
NF0005860 392 EIARICR|DM 0.338 .
NF0005860 408 DEYHVIR|HA 0.108 .
NF0005860 432 HALILGR|AI 0.085 .
NF0005860 441 TGLQAFK|-- 0.062 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation