NF0009150 | proteasome subunit

_IDPredictionOTHERSPmTPCS_Position
NF0009150OTHER0.9997770.0000400.000183
No Results

  • Fasta :-

    >NF0009150 MEIDERRNKALNVYAEKLAQHRQLEAEVKKIRENQKDLKKKYEKTEDDLKALQSVGQIVG EVLKQLDDERFIIKASSGPRYVTGVRKKIDKAKLKPGTRVALDMTTLTIMRILPREVDPS VFNMIESKDVKLDKTHFNEIGGLNEQIRELREAIELPLINPEIFVRVGIKAPKGVLLYGP PGTGKTLLARAIASNIEANFLKVVASAIVDKYIGESARIIREMFGYARDHQPCIIFMDEI DAIGGKRFSEGTSADREIQRTLMELLNQLDGFNDVGQVKFIMATNRPDVLDTALMRPGRL DRKIEISLPNEQGRLSILQIHSKNMTKQGEIDYDAIVKLSDGFNGADLRNVCTEAGMFAL RAKRDYVIQEDFMKAVRKMMDMKKLETKLEYSKI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0009150.fa Sequence name : NF0009150 Sequence length : 394 VALUES OF COMPUTED PARAMETERS Coef20 : 3.716 CoefTot : 0.000 ChDiff : 7 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.182 1.176 -0.160 0.458 MesoH : -0.687 0.522 -0.355 0.250 MuHd_075 : 20.620 8.353 5.553 4.293 MuHd_095 : 24.423 17.927 9.313 4.421 MuHd_100 : 26.328 17.209 8.737 4.756 MuHd_105 : 21.114 12.229 6.095 3.898 Hmax_075 : -12.950 1.517 -4.548 0.680 Hmax_095 : -1.100 9.900 -0.384 2.600 Hmax_100 : -8.200 4.600 -2.954 1.080 Hmax_105 : -14.350 0.933 -4.867 -0.402 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9635 0.0365 DFMC : 0.9644 0.0356
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 394 NF0009150 MEIDERRNKALNVYAEKLAQHRQLEAEVKKIRENQKDLKKKYEKTEDDLKALQSVGQIVGEVLKQLDDERFIIKASSGPR 80 YVTGVRKKIDKAKLKPGTRVALDMTTLTIMRILPREVDPSVFNMIESKDVKLDKTHFNEIGGLNEQIRELREAIELPLIN 160 PEIFVRVGIKAPKGVLLYGPPGTGKTLLARAIASNIEANFLKVVASAIVDKYIGESARIIREMFGYARDHQPCIIFMDEI 240 DAIGGKRFSEGTSADREIQRTLMELLNQLDGFNDVGQVKFIMATNRPDVLDTALMRPGRLDRKIEISLPNEQGRLSILQI 320 HSKNMTKQGEIDYDAIVKLSDGFNGADLRNVCTEAGMFALRAKRDYVIQEDFMKAVRKMMDMKKLETKLEYSKI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...........................................P.............................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NF0009150 6 -MEIDER|RN 0.064 . NF0009150 7 MEIDERR|NK 0.097 . NF0009150 9 IDERRNK|AL 0.116 . NF0009150 17 LNVYAEK|LA 0.063 . NF0009150 22 EKLAQHR|QL 0.103 . NF0009150 29 QLEAEVK|KI 0.070 . NF0009150 30 LEAEVKK|IR 0.105 . NF0009150 32 AEVKKIR|EN 0.089 . NF0009150 36 KIRENQK|DL 0.081 . NF0009150 39 ENQKDLK|KK 0.062 . NF0009150 40 NQKDLKK|KY 0.109 . NF0009150 41 QKDLKKK|YE 0.131 . NF0009150 44 LKKKYEK|TE 0.061 . NF0009150 50 KTEDDLK|AL 0.061 . NF0009150 64 IVGEVLK|QL 0.071 . NF0009150 70 KQLDDER|FI 0.094 . NF0009150 74 DERFIIK|AS 0.064 . NF0009150 80 KASSGPR|YV 0.200 . NF0009150 86 RYVTGVR|KK 0.069 . NF0009150 87 YVTGVRK|KI 0.088 . NF0009150 88 VTGVRKK|ID 0.106 . NF0009150 91 VRKKIDK|AK 0.064 . NF0009150 93 KKIDKAK|LK 0.072 . NF0009150 95 IDKAKLK|PG 0.066 . NF0009150 99 KLKPGTR|VA 0.080 . NF0009150 111 TTLTIMR|IL 0.072 . NF0009150 115 IMRILPR|EV 0.198 . NF0009150 128 FNMIESK|DV 0.081 . NF0009150 131 IESKDVK|LD 0.066 . NF0009150 134 KDVKLDK|TH 0.068 . NF0009150 148 GLNEQIR|EL 0.121 . NF0009150 151 EQIRELR|EA 0.190 . NF0009150 166 NPEIFVR|VG 0.088 . NF0009150 170 FVRVGIK|AP 0.063 . NF0009150 173 VGIKAPK|GV 0.073 . NF0009150 185 GPPGTGK|TL 0.058 . NF0009150 190 GKTLLAR|AI 0.093 . NF0009150 202 IEANFLK|VV 0.077 . NF0009150 211 ASAIVDK|YI 0.097 . NF0009150 218 YIGESAR|II 0.113 . NF0009150 221 ESARIIR|EM 0.263 . NF0009150 228 EMFGYAR|DH 0.093 . NF0009150 246 IDAIGGK|RF 0.064 . NF0009150 247 DAIGGKR|FS 0.158 . NF0009150 256 EGTSADR|EI 0.074 . NF0009150 260 ADREIQR|TL 0.106 . NF0009150 279 NDVGQVK|FI 0.070 . NF0009150 286 FIMATNR|PD 0.071 . NF0009150 296 LDTALMR|PG 0.072 . NF0009150 299 ALMRPGR|LD 0.303 . NF0009150 302 RPGRLDR|KI 0.457 . NF0009150 303 PGRLDRK|IE 0.066 . NF0009150 314 LPNEQGR|LS 0.121 . NF0009150 323 ILQIHSK|NM 0.072 . NF0009150 327 HSKNMTK|QG 0.069 . NF0009150 338 DYDAIVK|LS 0.055 . NF0009150 349 FNGADLR|NV 0.123 . NF0009150 361 AGMFALR|AK 0.096 . NF0009150 363 MFALRAK|RD 0.072 . NF0009150 364 FALRAKR|DY 0.641 *ProP* NF0009150 374 IQEDFMK|AV 0.093 . NF0009150 377 DFMKAVR|KM 0.075 . NF0009150 378 FMKAVRK|MM 0.094 . NF0009150 383 RKMMDMK|KL 0.088 . NF0009150 384 KMMDMKK|LE 0.097 . NF0009150 388 MKKLETK|LE 0.062 . NF0009150 393 TKLEYSK|I- 0.059 . ____________________________^_________________

  • Fasta :-

    >NF0009150 ATGGAGATCGACGAGAGAAGAAACAAAGCTCTGAATGTTTATGCTGAAAAGCTTGCTCAA CACAGACAATTGGAGGCTGAAGTAAAAAAGATTCGCGAAAATCAAAAAGATTTGAAAAAG AAATACGAAAAGACTGAAGATGATCTTAAAGCTCTCCAATCAGTTGGACAAATTGTAGGA GAAGTTTTGAAACAATTGGATGATGAACGTTTTATTATAAAGGCAAGCAGCGGACCAAGA TATGTTACCGGGGTTAGAAAAAAGATTGACAAGGCAAAATTAAAGCCAGGTACAAGAGTT GCTCTCGATATGACAACATTGACAATCATGAGGATTTTACCTCGTGAGGTTGATCCTTCA GTTTTCAACATGATTGAATCAAAAGATGTCAAATTAGATAAGACACACTTTAACGAAATT GGTGGCCTCAATGAACAAATTAGAGAATTGAGAGAAGCTATTGAACTTCCCCTCATCAAT CCAGAAATTTTCGTGAGAGTTGGTATCAAGGCACCAAAGGGTGTACTTTTGTACGGACCT CCTGGTACTGGTAAAACATTATTGGCAAGAGCCATTGCAAGCAATATCGAAGCAAACTTT TTGAAGGTTGTAGCTAGTGCCATTGTAGATAAATATATTGGAGAATCAGCTCGTATTATC CGTGAAATGTTTGGATACGCTCGTGATCACCAACCTTGCATAATTTTCATGGACGAAATC GACGCCATTGGTGGTAAAAGATTTTCTGAAGGTACAAGTGCCGATCGTGAAATTCAAAGA ACCCTCATGGAATTGTTGAATCAATTGGACGGATTCAACGATGTTGGTCAAGTCAAATTT ATCATGGCTACCAATAGACCTGACGTTCTGGATACTGCCTTGATGAGACCTGGTCGTCTG GATAGAAAGATTGAAATTTCATTGCCCAATGAACAGGGAAGATTGTCCATTTTACAAATT CACTCCAAAAACATGACCAAACAAGGTGAAATTGACTATGATGCCATTGTCAAATTATCG GATGGCTTCAACGGAGCAGATCTTCGTAACGTTTGTACCGAGGCTGGTATGTTTGCTCTC AGAGCCAAGAGAGACTATGTGATACAGGAGGACTTTATGAAAGCTGTGCGAAAGATGATG GATATGAAGAAGTTAGAAACCAAGCTTGAATATAGCAAGATTTAA
  • Download Fasta

  • Fasta :-

    MEIDERRNKALNVYAEKLAQHRQLEAEVKKIRENQKDLKKKYEKTEDDLKALQSVGQIVG EVLKQLDDERFIIKASSGPRYVTGVRKKIDKAKLKPGTRVALDMTTLTIMRILPREVDPS VFNMIESKDVKLDKTHFNEIGGLNEQIRELREAIELPLINPEIFVRVGIKAPKGVLLYGP PGTGKTLLARAIASNIEANFLKVVASAIVDKYIGESARIIREMFGYARDHQPCIIFMDEI DAIGGKRFSEGTSADREIQRTLMELLNQLDGFNDVGQVKFIMATNRPDVLDTALMRPGRL DRKIEISLPNEQGRLSILQIHSKNMTKQGEIDYDAIVKLSDGFNGADLRNVCTEAGMFAL RAKRDYVIQEDFMKAVRKMMDMKKLETKLEYSKI

  • title: ATP binding site
  • coordinates: P180,P181,G182,T183,G184,K185,T186,L187,D238,N285
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India