NF0009360 | sentrin-specific protease 8

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0009360OTHER0.9993100.0002720.000418
No Results

  • Fasta :-

    >NF0009360 MSQKRPSWLTLNFSKTYYDSQTLSDEDILLLTGKYWLNDNMINFYFLYLENEKYKKYQNE YCFMAPSVSFWVSMIDDEQDIKASLDPLKVQEKKLIFIPINDNTDIEAVNGGGSHWNLVV FERRNNTQEKSKFYYYDSGGNMNKRAAQRCIEKMAPHFGESGLDAKLIAKNAPQQNNGYD CGMYVAAMSDYIAEHGVSDSNIEKVLTPSFITQFRKDMLDLVEKKTKEEP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0009360.fa Sequence name : NF0009360 Sequence length : 230 VALUES OF COMPUTED PARAMETERS Coef20 : 4.023 CoefTot : -0.367 ChDiff : -6 ZoneTo : 18 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 0.788 -0.052 0.431 MesoH : -1.159 -0.143 -0.589 0.126 MuHd_075 : 14.241 1.804 2.470 3.188 MuHd_095 : 17.981 7.893 6.452 3.041 MuHd_100 : 19.508 6.248 6.642 3.010 MuHd_105 : 19.565 5.011 6.036 2.893 Hmax_075 : 2.538 -0.350 -2.089 1.972 Hmax_095 : 6.388 0.087 -0.432 2.214 Hmax_100 : 8.600 1.500 -0.072 2.400 Hmax_105 : 5.200 0.000 -1.500 1.730 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8599 0.1401 DFMC : 0.5972 0.4028
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 230 NF0009360 MSQKRPSWLTLNFSKTYYDSQTLSDEDILLLTGKYWLNDNMINFYFLYLENEKYKKYQNEYCFMAPSVSFWVSMIDDEQD 80 IKASLDPLKVQEKKLIFIPINDNTDIEAVNGGGSHWNLVVFERRNNTQEKSKFYYYDSGGNMNKRAAQRCIEKMAPHFGE 160 SGLDAKLIAKNAPQQNNGYDCGMYVAAMSDYIAEHGVSDSNIEKVLTPSFITQFRKDMLDLVEKKTKEEP 240 ................................................................................ 80 ................................................................................ 160 ...................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0009360 4 ---MSQK|RP 0.060 . NF0009360 5 --MSQKR|PS 0.159 . NF0009360 15 LTLNFSK|TY 0.065 . NF0009360 34 ILLLTGK|YW 0.060 . NF0009360 53 LYLENEK|YK 0.054 . NF0009360 55 LENEKYK|KY 0.073 . NF0009360 56 ENEKYKK|YQ 0.100 . NF0009360 82 DDEQDIK|AS 0.057 . NF0009360 89 ASLDPLK|VQ 0.065 . NF0009360 93 PLKVQEK|KL 0.063 . NF0009360 94 LKVQEKK|LI 0.103 . NF0009360 123 NLVVFER|RN 0.111 . NF0009360 124 LVVFERR|NN 0.126 . NF0009360 130 RNNTQEK|SK 0.107 . NF0009360 132 NTQEKSK|FY 0.067 . NF0009360 144 SGGNMNK|RA 0.061 . NF0009360 145 GGNMNKR|AA 0.250 . NF0009360 149 NKRAAQR|CI 0.160 . NF0009360 153 AQRCIEK|MA 0.069 . NF0009360 166 ESGLDAK|LI 0.067 . NF0009360 170 DAKLIAK|NA 0.073 . NF0009360 204 SDSNIEK|VL 0.075 . NF0009360 215 SFITQFR|KD 0.079 . NF0009360 216 FITQFRK|DM 0.080 . NF0009360 224 MLDLVEK|KT 0.059 . NF0009360 225 LDLVEKK|TK 0.085 . NF0009360 227 LVEKKTK|EE 0.061 . ____________________________^_________________

  • Fasta :-

    >NF0009360 ATGTCCCAAAAACGACCTTCGTGGCTAACTCTGAATTTTTCAAAAACCTATTACGATTCA CAAACTCTCTCCGATGAGGATATTCTTTTATTGACTGGAAAATACTGGCTCAATGATAAC ATGATCAATTTTTATTTTCTTTATTTGGAAAATGAAAAATATAAAAAGTATCAGAATGAA TATTGTTTCATGGCTCCCTCTGTTTCATTTTGGGTTTCCATGATCGATGATGAACAAGAT ATTAAAGCATCATTGGATCCATTAAAAGTCCAAGAAAAGAAATTAATATTTATTCCGATT AATGATAATACAGATATTGAAGCAGTGAATGGCGGAGGCTCACATTGGAATCTTGTTGTA TTTGAGAGGAGAAACAATACACAAGAAAAGAGTAAATTTTACTATTATGATTCTGGTGGA AACATGAATAAGAGAGCTGCACAGAGATGTATTGAAAAGATGGCTCCACATTTTGGAGAG TCTGGTTTGGATGCAAAATTGATTGCCAAGAATGCCCCTCAACAGAATAATGGTTATGAC TGTGGAATGTATGTGGCAGCTATGAGTGACTACATTGCAGAACATGGAGTTTCAGATTCA AACATTGAAAAGGTACTCACTCCCTCTTTCATCACACAATTCAGAAAAGACATGTTGGAT TTAGTCGAAAAAAAGACAAAGGAAGAACCTTAA
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  • Fasta :-

    MSQKRPSWLTLNFSKTYYDSQTLSDEDILLLTGKYWLNDNMINFYFLYLENEKYKKYQNE YCFMAPSVSFWVSMIDDEQDIKASLDPLKVQEKKLIFIPINDNTDIEAVNGGGSHWNLVV FERRNNTQEKSKFYYYDSGGNMNKRAAQRCIEKMAPHFGESGLDAKLIAKNAPQQNNGYD CGMYVAAMSDYIAEHGVSDSNIEKVLTPSFITQFRKDMLDLVEKKTKEEP

    No Results
No Results
No Results
IDSitePeptideScoreMethod
NF000936024 SSQTLSDEDI0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India