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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0013330.fa
Sequence name : NF0013330
Sequence length : 352
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.259
CoefTot : -0.143
ChDiff : -11
ZoneTo : 22
KR : 3
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.347 1.365 0.377 0.575
MesoH : -0.308 0.296 -0.322 0.233
MuHd_075 : 21.900 5.658 4.656 3.627
MuHd_095 : 26.750 18.522 8.107 6.261
MuHd_100 : 25.670 21.250 9.462 6.267
MuHd_105 : 20.952 20.723 8.878 5.355
Hmax_075 : 6.650 0.350 0.065 2.217
Hmax_095 : 10.763 10.600 3.589 3.530
Hmax_100 : 11.700 10.600 3.589 3.830
Hmax_105 : 9.800 12.483 3.920 2.931
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.4385 0.5615
DFMC : 0.5114 0.4886
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
352 NF0013330
MSCSQARPSSSRGIQLLSNPKYEVFPVLMQILSHLEPVANYALFGSNKRRRSDASSLKQQEEVVDTTIHTRSPFFQAFDQ 80
LLEYIWKSHDDPQDPSEQQLMERFVQTLKEACDSLTDNPDIMELYTLIVSLLMFGHHELENEFCGEITTTLGVCPVCTFS 160
KHPCVEKVPKLQASTQLWKNFETTGIMDFVVTESIDEYSCQVCSTVYNVLKSDFVSKPPEILVLQLDRFNFNFETFTVQK 240
SHTLFPLNVKAPLSLRYYGQQGALIQQYDLVAIANHEGQGVNGVYSCCFWNTASHKWYTCHGNQLPIPFTQNLEYLISPA 320
NYLLFFTKKQAQEKTSFLRQFGNTDISFTFSE 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................ 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0013330 7 MSCSQAR|PS 0.114 .
NF0013330 12 ARPSSSR|GI 0.086 .
NF0013330 21 QLLSNPK|YE 0.053 .
NF0013330 48 ALFGSNK|RR 0.056 .
NF0013330 49 LFGSNKR|RR 0.113 .
NF0013330 50 FGSNKRR|RS 0.202 .
NF0013330 51 GSNKRRR|SD 0.398 .
NF0013330 58 SDASSLK|QQ 0.078 .
NF0013330 71 DTTIHTR|SP 0.101 .
NF0013330 87 LLEYIWK|SH 0.077 .
NF0013330 103 EQQLMER|FV 0.124 .
NF0013330 109 RFVQTLK|EA 0.067 .
NF0013330 161 PVCTFSK|HP 0.059 .
NF0013330 167 KHPCVEK|VP 0.056 .
NF0013330 170 CVEKVPK|LQ 0.060 .
NF0013330 179 ASTQLWK|NF 0.064 .
NF0013330 211 TVYNVLK|SD 0.088 .
NF0013330 217 KSDFVSK|PP 0.071 .
NF0013330 228 LVLQLDR|FN 0.087 .
NF0013330 240 ETFTVQK|SH 0.066 .
NF0013330 250 LFPLNVK|AP 0.052 .
NF0013330 256 KAPLSLR|YY 0.125 .
NF0013330 296 WNTASHK|WY 0.073 .
NF0013330 328 YLLFFTK|KQ 0.066 .
NF0013330 329 LLFFTKK|QA 0.118 .
NF0013330 334 KKQAQEK|TS 0.065 .
NF0013330 339 EKTSFLR|QF 0.094 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation