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_ID
Prediction
OTHER
SP
mTP
CS_Position
NF0013330 OTHER 0.998490 0.000392 0.001118
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >NF0013330 MSCSQARPSSSRGIQLLSNPKYEVFPVLMQILSHLEPVANYALFGSNKRRRSDASSLKQQ EEVVDTTIHTRSPFFQAFDQLLEYIWKSHDDPQDPSEQQLMERFVQTLKEACDSLTDNPD IMELYTLIVSLLMFGHHELENEFCGEITTTLGVCPVCTFSKHPCVEKVPKLQASTQLWKN FETTGIMDFVVTESIDEYSCQVCSTVYNVLKSDFVSKPPEILVLQLDRFNFNFETFTVQK SHTLFPLNVKAPLSLRYYGQQGALIQQYDLVAIANHEGQGVNGVYSCCFWNTASHKWYTC HGNQLPIPFTQNLEYLISPANYLLFFTKKQAQEKTSFLRQFGNTDISFTFSE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0013330.fa Sequence name : NF0013330 Sequence length : 352 VALUES OF COMPUTED PARAMETERS Coef20 : 4.259 CoefTot : -0.143 ChDiff : -11 ZoneTo : 22 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.347 1.365 0.377 0.575 MesoH : -0.308 0.296 -0.322 0.233 MuHd_075 : 21.900 5.658 4.656 3.627 MuHd_095 : 26.750 18.522 8.107 6.261 MuHd_100 : 25.670 21.250 9.462 6.267 MuHd_105 : 20.952 20.723 8.878 5.355 Hmax_075 : 6.650 0.350 0.065 2.217 Hmax_095 : 10.763 10.600 3.589 3.530 Hmax_100 : 11.700 10.600 3.589 3.830 Hmax_105 : 9.800 12.483 3.920 2.931 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4385 0.5615 DFMC : 0.5114 0.4886
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 352 NF0013330 MSCSQARPSSSRGIQLLSNPKYEVFPVLMQILSHLEPVANYALFGSNKRRRSDASSLKQQEEVVDTTIHTRSPFFQAFDQ 80 LLEYIWKSHDDPQDPSEQQLMERFVQTLKEACDSLTDNPDIMELYTLIVSLLMFGHHELENEFCGEITTTLGVCPVCTFS 160 KHPCVEKVPKLQASTQLWKNFETTGIMDFVVTESIDEYSCQVCSTVYNVLKSDFVSKPPEILVLQLDRFNFNFETFTVQK 240 SHTLFPLNVKAPLSLRYYGQQGALIQQYDLVAIANHEGQGVNGVYSCCFWNTASHKWYTCHGNQLPIPFTQNLEYLISPA 320 NYLLFFTKKQAQEKTSFLRQFGNTDISFTFSE 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0013330 7 MSCSQAR|PS 0.114 . NF0013330 12 ARPSSSR|GI 0.086 . NF0013330 21 QLLSNPK|YE 0.053 . NF0013330 48 ALFGSNK|RR 0.056 . NF0013330 49 LFGSNKR|RR 0.113 . NF0013330 50 FGSNKRR|RS 0.202 . NF0013330 51 GSNKRRR|SD 0.398 . NF0013330 58 SDASSLK|QQ 0.078 . NF0013330 71 DTTIHTR|SP 0.101 . NF0013330 87 LLEYIWK|SH 0.077 . NF0013330 103 EQQLMER|FV 0.124 . NF0013330 109 RFVQTLK|EA 0.067 . NF0013330 161 PVCTFSK|HP 0.059 . NF0013330 167 KHPCVEK|VP 0.056 . NF0013330 170 CVEKVPK|LQ 0.060 . NF0013330 179 ASTQLWK|NF 0.064 . NF0013330 211 TVYNVLK|SD 0.088 . NF0013330 217 KSDFVSK|PP 0.071 . NF0013330 228 LVLQLDR|FN 0.087 . NF0013330 240 ETFTVQK|SH 0.066 . NF0013330 250 LFPLNVK|AP 0.052 . NF0013330 256 KAPLSLR|YY 0.125 . NF0013330 296 WNTASHK|WY 0.073 . NF0013330 328 YLLFFTK|KQ 0.066 . NF0013330 329 LLFFTKK|QA 0.118 . NF0013330 334 KKQAQEK|TS 0.065 . NF0013330 339 EKTSFLR|QF 0.094 . ____________________________^_________________
  • Fasta :-

    >NF0013330 ATGTCATGTTCTCAAGCACGACCCTCATCATCACGAGGGATTCAACTCCTTTCCAATCCC AAGTATGAAGTGTTTCCGGTGCTCATGCAAATATTATCTCATTTGGAACCAGTGGCTAAT TATGCCTTGTTCGGATCGAATAAAAGACGACGATCCGATGCATCATCTTTGAAACAACAA GAAGAAGTTGTGGATACGACAATTCATACTCGATCGCCCTTTTTTCAAGCCTTTGATCAA TTACTGGAATATATTTGGAAGAGTCATGATGATCCTCAAGATCCATCAGAACAGCAATTA ATGGAAAGATTTGTACAAACGTTGAAGGAGGCTTGCGATTCTCTCACTGACAATCCTGAC ATAATGGAATTGTATACATTGATTGTATCCTTATTGATGTTTGGACATCATGAATTGGAA AACGAATTTTGTGGAGAAATCACTACCACTTTGGGAGTATGTCCTGTTTGTACTTTTTCA AAACATCCTTGTGTGGAGAAAGTTCCAAAGTTGCAAGCGTCCACTCAATTGTGGAAGAAC TTTGAGACAACTGGAATTATGGATTTTGTTGTGACTGAGAGCATTGATGAATATAGCTGT CAAGTGTGCAGCACAGTATACAATGTTCTAAAAAGTGACTTTGTTTCAAAACCACCTGAA ATATTGGTGTTACAATTAGATAGATTTAATTTCAATTTTGAAACATTTACTGTCCAAAAA TCTCATACACTGTTCCCATTGAATGTAAAAGCTCCTTTATCTTTAAGATATTATGGACAA CAAGGAGCATTAATACAACAGTATGATTTAGTTGCTATAGCAAATCATGAAGGACAGGGA GTGAATGGAGTTTATTCATGCTGCTTCTGGAATACTGCATCACATAAATGGTATACGTGC CACGGAAATCAACTTCCAATCCCCTTCACTCAGAATCTTGAATACCTAATATCTCCTGCA AATTATTTGCTCTTTTTTACTAAGAAACAAGCGCAAGAAAAAACATCCTTTTTACGACAA TTTGGAAATACTGACATTAGTTTTACATTTTCTGAATAA
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  • Fasta :-

    MSCSQARPSSSRGIQLLSNPKYEVFPVLMQILSHLEPVANYALFGSNKRRRSDASSLKQQ EEVVDTTIHTRSPFFQAFDQLLEYIWKSHDDPQDPSEQQLMERFVQTLKEACDSLTDNPD IMELYTLIVSLLMFGHHELENEFCGEITTTLGVCPVCTFSKHPCVEKVPKLQASTQLWKN FETTGIMDFVVTESIDEYSCQVCSTVYNVLKSDFVSKPPEILVLQLDRFNFNFETFTVQK SHTLFPLNVKAPLSLRYYGQQGALIQQYDLVAIANHEGQGVNGVYSCCFWNTASHKWYTC HGNQLPIPFTQNLEYLISPANYLLFFTKKQAQEKTSFLRQFGNTDISFTFSE

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ID
Site
Peptide
Score
Method
ID
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Method
ID
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ID
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Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
NF0013330 56 S SDASSLKQQ 0.997 unsp NF0013330 56 S SDASSLKQQ 0.997 unsp NF0013330 56 S SDASSLKQQ 0.997 unsp NF0013330 107 T RFVQTLKEA 0.994 unsp NF0013330 114 S EACDSLTDN 0.991 unsp NF0013330 9 S QARPSSSRG 0.996 unsp NF0013330 52 S KRRRSDASS 0.995 unsp
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India