NF0014560 | ubiquitin carboxyl-terminal hydrolase 6-like

_IDPredictionOTHERSPmTPCS_Position
NF0014560OTHER0.9998710.0000340.000095
No Results

  • Fasta :-

    >NF0014560 MPSVKIAWNKSTYDNVEIGDLKTGLDFKKKCQELTGVPPERQKVMGLGAGLLKDDADLSS LKVKQGQLVRVMGSTEPVPEAPKEKIVFIEDAVKEGGEVGEMTYYPAGLENLGNTCYMNS VVETLRYVPELRQSLDTFDQSNVSDLYEKDKTLTVELKNLLNNLDSKHESFAPITFLNAL RTAYPQFAEKDRNELGEFYAQQDSDEFLTNLLGSLENTLRQNDKNIIKELFEGEFEVKLQ CTECEEPPVVTKESWKKLSCFISQQINNLPFGLQKSLEGTVEKESQTLGRVAVYSKIQRI SKLPNYLVINFVRFFWKQKQQLKAKVLREVQFPSILDVFDLCSEEYKSKLKPVREKMREL REEEMKKKKEESLAGTSQANKKQKTENQKDLTPLYQVEESGWYELYAVVTHKGRAANEGH YVGWVKTESGQWLEFDDDDVTAVTEEDIKKLSGGGDWHVSYICLYRKCRTAP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0014560.fa Sequence name : NF0014560 Sequence length : 472 VALUES OF COMPUTED PARAMETERS Coef20 : 3.364 CoefTot : -0.405 ChDiff : -10 ZoneTo : 13 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.276 0.924 -0.204 0.368 MesoH : -1.240 -0.075 -0.565 0.112 MuHd_075 : 26.150 9.824 7.057 4.747 MuHd_095 : 24.684 10.431 5.974 2.855 MuHd_100 : 19.377 8.647 3.598 2.444 MuHd_105 : 10.884 3.819 0.388 1.281 Hmax_075 : 3.587 5.075 -0.875 2.600 Hmax_095 : 7.500 4.500 -1.142 2.790 Hmax_100 : 8.400 7.200 -0.887 3.610 Hmax_105 : 4.000 7.200 -1.202 3.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9797 0.0203 DFMC : 0.9573 0.0427
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 472 NF0014560 MPSVKIAWNKSTYDNVEIGDLKTGLDFKKKCQELTGVPPERQKVMGLGAGLLKDDADLSSLKVKQGQLVRVMGSTEPVPE 80 APKEKIVFIEDAVKEGGEVGEMTYYPAGLENLGNTCYMNSVVETLRYVPELRQSLDTFDQSNVSDLYEKDKTLTVELKNL 160 LNNLDSKHESFAPITFLNALRTAYPQFAEKDRNELGEFYAQQDSDEFLTNLLGSLENTLRQNDKNIIKELFEGEFEVKLQ 240 CTECEEPPVVTKESWKKLSCFISQQINNLPFGLQKSLEGTVEKESQTLGRVAVYSKIQRISKLPNYLVINFVRFFWKQKQ 320 QLKAKVLREVQFPSILDVFDLCSEEYKSKLKPVREKMRELREEEMKKKKEESLAGTSQANKKQKTENQKDLTPLYQVEES 400 GWYELYAVVTHKGRAANEGHYVGWVKTESGQWLEFDDDDVTAVTEEDIKKLSGGGDWHVSYICLYRKCRTAP 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0014560 5 --MPSVK|IA 0.065 . NF0014560 10 VKIAWNK|ST 0.099 . NF0014560 22 VEIGDLK|TG 0.052 . NF0014560 28 KTGLDFK|KK 0.069 . NF0014560 29 TGLDFKK|KC 0.089 . NF0014560 30 GLDFKKK|CQ 0.096 . NF0014560 41 TGVPPER|QK 0.115 . NF0014560 43 VPPERQK|VM 0.060 . NF0014560 53 LGAGLLK|DD 0.060 . NF0014560 62 ADLSSLK|VK 0.057 . NF0014560 64 LSSLKVK|QG 0.081 . NF0014560 70 KQGQLVR|VM 0.088 . NF0014560 83 PVPEAPK|EK 0.055 . NF0014560 85 PEAPKEK|IV 0.090 . NF0014560 94 FIEDAVK|EG 0.067 . NF0014560 126 SVVETLR|YV 0.104 . NF0014560 132 RYVPELR|QS 0.087 . NF0014560 149 VSDLYEK|DK 0.057 . NF0014560 151 DLYEKDK|TL 0.074 . NF0014560 158 TLTVELK|NL 0.065 . NF0014560 167 LNNLDSK|HE 0.071 . NF0014560 181 TFLNALR|TA 0.096 . NF0014560 190 YPQFAEK|DR 0.066 . NF0014560 192 QFAEKDR|NE 0.083 . NF0014560 220 SLENTLR|QN 0.091 . NF0014560 224 TLRQNDK|NI 0.088 . NF0014560 228 NDKNIIK|EL 0.074 . NF0014560 238 EGEFEVK|LQ 0.057 . NF0014560 252 EPPVVTK|ES 0.072 . NF0014560 256 VTKESWK|KL 0.068 . NF0014560 257 TKESWKK|LS 0.103 . NF0014560 275 LPFGLQK|SL 0.087 . NF0014560 283 LEGTVEK|ES 0.066 . NF0014560 290 ESQTLGR|VA 0.102 . NF0014560 296 RVAVYSK|IQ 0.058 . NF0014560 299 VYSKIQR|IS 0.069 . NF0014560 302 KIQRISK|LP 0.090 . NF0014560 313 LVINFVR|FF 0.126 . NF0014560 317 FVRFFWK|QK 0.067 . NF0014560 319 RFFWKQK|QQ 0.061 . NF0014560 323 KQKQQLK|AK 0.062 . NF0014560 325 KQQLKAK|VL 0.078 . NF0014560 328 LKAKVLR|EV 0.106 . NF0014560 347 LCSEEYK|SK 0.079 . NF0014560 349 SEEYKSK|LK 0.065 . NF0014560 351 EYKSKLK|PV 0.074 . NF0014560 354 SKLKPVR|EK 0.105 . NF0014560 356 LKPVREK|MR 0.067 . NF0014560 358 PVREKMR|EL 0.118 . NF0014560 361 EKMRELR|EE 0.229 . NF0014560 366 LREEEMK|KK 0.062 . NF0014560 367 REEEMKK|KK 0.112 . NF0014560 368 EEEMKKK|KE 0.094 . NF0014560 369 EEMKKKK|EE 0.117 . NF0014560 381 GTSQANK|KQ 0.060 . NF0014560 382 TSQANKK|QK 0.138 . NF0014560 384 QANKKQK|TE 0.083 . NF0014560 389 QKTENQK|DL 0.071 . NF0014560 412 YAVVTHK|GR 0.075 . NF0014560 414 VVTHKGR|AA 0.108 . NF0014560 426 HYVGWVK|TE 0.061 . NF0014560 449 VTEEDIK|KL 0.069 . NF0014560 450 TEEDIKK|LS 0.133 . NF0014560 466 SYICLYR|KC 0.082 . NF0014560 467 YICLYRK|CR 0.068 . NF0014560 469 CLYRKCR|TA 0.277 . ____________________________^_________________

  • Fasta :-

    >NF0014560 ATGCCTTCTGTAAAGATTGCTTGGAACAAATCAACCTATGATAACGTGGAGATTGGAGAC TTGAAGACGGGATTGGATTTCAAGAAGAAATGCCAAGAATTAACTGGTGTTCCTCCTGAA AGACAAAAAGTCATGGGTTTGGGTGCAGGTCTTTTGAAGGACGATGCCGATCTTTCATCC TTGAAAGTCAAACAAGGTCAACTTGTTCGAGTGATGGGATCCACAGAACCAGTACCAGAA GCACCAAAAGAAAAGATTGTTTTTATAGAGGATGCTGTTAAAGAAGGTGGAGAAGTGGGA GAAATGACATACTATCCAGCTGGTTTGGAAAATTTAGGAAACACTTGCTACATGAATTCT GTAGTTGAAACTTTGAGATATGTTCCTGAGTTGAGACAGTCTCTCGACACCTTTGATCAA AGTAATGTGAGCGATTTGTATGAAAAGGATAAGACTCTTACTGTAGAATTGAAAAACCTT CTTAATAATTTGGACTCCAAACATGAATCTTTTGCTCCAATTACCTTCTTGAATGCTTTA AGAACTGCTTATCCTCAATTTGCAGAGAAGGACCGAAACGAGCTTGGTGAATTTTATGCT CAACAAGATTCTGACGAATTTCTCACAAATTTATTAGGTTCTCTCGAGAATACTCTCAGA CAAAATGACAAGAATATTATCAAGGAATTATTTGAAGGCGAATTTGAAGTCAAACTTCAG TGCACTGAGTGTGAGGAGCCTCCAGTTGTGACCAAGGAGAGTTGGAAGAAATTGTCATGT TTCATTTCACAACAAATTAATAACTTACCTTTTGGATTACAAAAGAGCTTGGAAGGAACT GTTGAAAAGGAATCACAAACTCTCGGAAGAGTGGCAGTCTATTCAAAAATTCAGAGAATT AGCAAATTGCCAAATTATTTGGTTATCAACTTTGTTCGATTTTTCTGGAAGCAAAAGCAG CAACTGAAAGCAAAAGTTCTCAGAGAAGTGCAGTTTCCATCAATTCTTGACGTTTTCGAC CTATGCAGTGAAGAATACAAGAGCAAATTGAAGCCTGTCAGAGAAAAGATGAGAGAACTA AGAGAGGAAGAAATGAAAAAGAAGAAGGAAGAATCTCTTGCTGGTACCTCACAAGCAAAC AAGAAACAAAAAACTGAAAACCAAAAAGATTTAACCCCTCTCTATCAAGTCGAGGAAAGT GGATGGTATGAATTGTATGCTGTTGTCACCCACAAAGGAAGAGCAGCTAACGAAGGTCAC TACGTTGGCTGGGTTAAGACTGAATCAGGTCAATGGCTCGAGTTTGACGATGATGATGTT ACAGCAGTCACTGAAGAGGATATCAAGAAGTTAAGCGGAGGCGGTGATTGGCATGTTTCT TACATTTGCCTCTACAGAAAGTGTAGAACTGCACCATAA
  • Download Fasta

  • Fasta :-

    MPSVKIAWNKSTYDNVEIGDLKTGLDFKKKCQELTGVPPERQKVMGLGAGLLKDDADLSS LKVKQGQLVRVMGSTEPVPEAPKEKIVFIEDAVKEGGEVGEMTYYPAGLENLGNTCYMNS VVETLRYVPELRQSLDTFDQSNVSDLYEKDKTLTVELKNLLNNLDSKHESFAPITFLNAL RTAYPQFAEKDRNELGEFYAQQDSDEFLTNLLGSLENTLRQNDKNIIKELFEGEFEVKLQ CTECEEPPVVTKESWKKLSCFISQQINNLPFGLQKSLEGTVEKESQTLGRVAVYSKIQRI SKLPNYLVINFVRFFWKQKQQLKAKVLREVQFPSILDVFDLCSEEYKSKLKPVREKMREL REEEMKKKKEESLAGTSQANKKQKTENQKDLTPLYQVEESGWYELYAVVTHKGRAANEGH YVGWVKTESGQWLEFDDDDVTAVTEEDIKKLSGGGDWHVSYICLYRKCRTAP

  • title: Active Site
  • coordinates: N111,C116,H420,D437
No Results
No Results
IDSitePeptideScoreMethod
NF001456011 SAWNKSTYDN0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India