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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0016540.fa
Sequence name : NF0016540
Sequence length : 967
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.227
CoefTot : 0.708
ChDiff : 0
ZoneTo : 62
KR : 9
DE : 0
CleavSite : 13
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.324 1.041 0.145 0.570
MesoH : 0.294 0.231 -0.234 0.251
MuHd_075 : 43.248 25.572 11.176 10.151
MuHd_095 : 31.719 16.290 7.608 7.015
MuHd_100 : 29.733 16.529 7.343 6.819
MuHd_105 : 39.041 21.527 8.814 8.207
Hmax_075 : 7.700 17.000 3.880 2.870
Hmax_095 : 0.525 8.500 0.584 3.410
Hmax_100 : 2.500 16.100 2.615 2.110
Hmax_105 : 7.000 22.400 -0.254 3.045
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0089 0.9911
DFMC : 0.0032 0.9968
This protein is probably imported in chloroplast.
f(Ser) = 0.2097 f(Arg) = 0.0968 CMi = 1.02041
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
967 NF0016540
MRRGFSRSSISKIKHHQHAARASRTLLCANTSSSIGSTFFSSQQLLLVQQISKQCPIARSFFDLSEEELRNVKGKDKKKT 80
GATTTSAAATSEKSSLASSSSLSSSIGSATLSTTKSTTTTTTTTTPNSITTTFNNSTTEAASSGASSKASSSSLDSHPVN 160
PITKESKEESFTSFKSPPKPSAPLTGQCLNYKILHQEDPASEIVYDGRSAEVQCMMDIFSKHEGYNNVMLVGEHGVGRDS 240
IVHAFVQTIERESAYGSLPSRLKNLKVVELNVENLYGCNSTNNVSVAFMNALEKLGVYDPYGWEIPPHPSKATLKEKATY 320
LFGSQSVTHSKTFVENAFNDRLKTLREYASREKSHGSERKILFIPGLFKMVDDYSYKFYDSISSVLHPLLETKKVQLIGC 400
MTPSEFAMFKNSPLYPFFQIIEVKETNWSDTLKILEKRKDSIETWHGVIIPSELIEEAVRLADRYLPTKNNPSKCISIID 480
EVAALAERRAGAMPQEILDLEARIKILNIETWTAELNAFLKYKKNKLDIHHLKQELKQCIQLIDSSESLYAKRAAAIIQE 560
DLPALKKEISNFKESLKKNVYVNITASLEDLATVVSRMAGIKPSDIYFSSQSNASLINLESEIEKTIVGQSEAIQTIAQS 640
IRVARSGLREENKPQGAYLLVGRSGTGKTELAKQTAKVLYGSEEFITVIDMTKYNTQWSITGLIGVTPGYIGFETGGELT 720
NAVKRNPHQVIVLDEIEKAHPSIWNVLLPIFEEAMCMDNNGKRISFKHTTIILTSNVGTKRLQEEREDDKDLTRQEIIME 800
EVKHTFAPEFLNRLDEIVVFNDLTMTHLDTILTLQLRQLEERLSKKKPITITLTPEARQFLLYQSFDIQYGARPIKRNIQ 880
TFISSPLAKMIFEGKLDQCCNVLVSIEQKKNLSFTIQVNEEKETEYRSKQNKTELDELIELEYHYDNALKKVSLNNTENQ 960
SSNCHVQ 1040
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
....P........................................................................... 720
................................................................................ 800
................................................................................ 880
................................................................................ 960
....... 1040
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1
Name Pos Context Score Pred
____________________________v_________________
NF0016540 2 -----MR|RG 0.070 .
NF0016540 3 ----MRR|GF 0.164 .
NF0016540 7 MRRGFSR|SS 0.231 .
NF0016540 12 SRSSISK|IK 0.087 .
NF0016540 14 SSISKIK|HH 0.072 .
NF0016540 21 HHQHAAR|AS 0.131 .
NF0016540 24 HAARASR|TL 0.257 .
NF0016540 53 LVQQISK|QC 0.060 .
NF0016540 59 KQCPIAR|SF 0.147 .
NF0016540 70 LSEEELR|NV 0.096 .
NF0016540 73 EELRNVK|GK 0.111 .
NF0016540 75 LRNVKGK|DK 0.145 .
NF0016540 77 NVKGKDK|KK 0.067 .
NF0016540 78 VKGKDKK|KT 0.146 .
NF0016540 79 KGKDKKK|TG 0.090 .
NF0016540 93 AAATSEK|SS 0.081 .
NF0016540 115 ATLSTTK|ST 0.073 .
NF0016540 148 SSGASSK|AS 0.092 .
NF0016540 164 PVNPITK|ES 0.062 .
NF0016540 167 PITKESK|EE 0.055 .
NF0016540 175 ESFTSFK|SP 0.062 .
NF0016540 179 SFKSPPK|PS 0.064 .
NF0016540 192 GQCLNYK|IL 0.072 .
NF0016540 208 EIVYDGR|SA 0.175 .
NF0016540 221 MMDIFSK|HE 0.068 .
NF0016540 238 GEHGVGR|DS 0.131 .
NF0016540 251 FVQTIER|ES 0.067 .
NF0016540 261 YGSLPSR|LK 0.079 .
NF0016540 263 SLPSRLK|NL 0.063 .
NF0016540 266 SRLKNLK|VV 0.077 .
NF0016540 294 FMNALEK|LG 0.054 .
NF0016540 311 IPPHPSK|AT 0.070 .
NF0016540 315 PSKATLK|EK 0.073 .
NF0016540 317 KATLKEK|AT 0.072 .
NF0016540 331 QSVTHSK|TF 0.060 .
NF0016540 341 ENAFNDR|LK 0.074 .
NF0016540 343 AFNDRLK|TL 0.065 .
NF0016540 346 DRLKTLR|EY 0.087 .
NF0016540 351 LREYASR|EK 0.101 .
NF0016540 353 EYASREK|SH 0.080 .
NF0016540 359 KSHGSER|KI 0.097 .
NF0016540 360 SHGSERK|IL 0.092 .
NF0016540 369 FIPGLFK|MV 0.069 .
NF0016540 377 VDDYSYK|FY 0.068 .
NF0016540 393 HPLLETK|KV 0.078 .
NF0016540 394 PLLETKK|VQ 0.073 .
NF0016540 410 SEFAMFK|NS 0.058 .
NF0016540 424 FQIIEVK|ET 0.064 .
NF0016540 433 NWSDTLK|IL 0.081 .
NF0016540 437 TLKILEK|RK 0.072 .
NF0016540 438 LKILEKR|KD 0.176 .
NF0016540 439 KILEKRK|DS 0.097 .
NF0016540 460 LIEEAVR|LA 0.101 .
NF0016540 464 AVRLADR|YL 0.093 .
NF0016540 469 DRYLPTK|NN 0.060 .
NF0016540 474 TKNNPSK|CI 0.101 .
NF0016540 488 VAALAER|RA 0.095 .
NF0016540 489 AALAERR|AG 0.098 .
NF0016540 503 ILDLEAR|IK 0.078 .
NF0016540 505 DLEARIK|IL 0.066 .
NF0016540 521 ELNAFLK|YK 0.074 .
NF0016540 523 NAFLKYK|KN 0.067 .
NF0016540 524 AFLKYKK|NK 0.080 .
NF0016540 526 LKYKKNK|LD 0.087 .
NF0016540 533 LDIHHLK|QE 0.066 .
NF0016540 537 HLKQELK|QC 0.071 .
NF0016540 552 SESLYAK|RA 0.079 .
NF0016540 553 ESLYAKR|AA 0.207 .
NF0016540 566 EDLPALK|KE 0.053 .
NF0016540 567 DLPALKK|EI 0.087 .
NF0016540 573 KEISNFK|ES 0.058 .
NF0016540 577 NFKESLK|KN 0.059 .
NF0016540 578 FKESLKK|NV 0.123 .
NF0016540 597 LATVVSR|MA 0.157 .
NF0016540 602 SRMAGIK|PS 0.076 .
NF0016540 625 LESEIEK|TI 0.067 .
NF0016540 642 TIAQSIR|VA 0.139 .
NF0016540 645 QSIRVAR|SG 0.507 *ProP*
NF0016540 649 VARSGLR|EE 0.073 .
NF0016540 653 GLREENK|PQ 0.082 .
NF0016540 663 AYLLVGR|SG 0.098 .
NF0016540 668 GRSGTGK|TE 0.075 .
NF0016540 673 GKTELAK|QT 0.076 .
NF0016540 677 LAKQTAK|VL 0.071 .
NF0016540 693 TVIDMTK|YN 0.065 .
NF0016540 724 ELTNAVK|RN 0.056 .
NF0016540 725 LTNAVKR|NP 0.219 .
NF0016540 738 VLDEIEK|AH 0.054 .
NF0016540 762 CMDNNGK|RI 0.065 .
NF0016540 763 MDNNGKR|IS 0.213 .
NF0016540 767 GKRISFK|HT 0.105 .
NF0016540 780 TSNVGTK|RL 0.072 .
NF0016540 781 SNVGTKR|LQ 0.181 .
NF0016540 786 KRLQEER|ED 0.095 .
NF0016540 790 EEREDDK|DL 0.075 .
NF0016540 794 DDKDLTR|QE 0.080 .
NF0016540 803 IIMEEVK|HT 0.066 .
NF0016540 813 APEFLNR|LD 0.100 .
NF0016540 837 ILTLQLR|QL 0.082 .
NF0016540 842 LRQLEER|LS 0.095 .
NF0016540 845 LEERLSK|KK 0.091 .
NF0016540 846 EERLSKK|KP 0.099 .
NF0016540 847 ERLSKKK|PI 0.114 .
NF0016540 858 TLTPEAR|QF 0.078 .
NF0016540 873 DIQYGAR|PI 0.101 .
NF0016540 876 YGARPIK|RN 0.123 .
NF0016540 877 GARPIKR|NI 0.233 .
NF0016540 889 ISSPLAK|MI 0.105 .
NF0016540 895 KMIFEGK|LD 0.057 .
NF0016540 909 LVSIEQK|KN 0.061 .
NF0016540 910 VSIEQKK|NL 0.101 .
NF0016540 922 IQVNEEK|ET 0.062 .
NF0016540 927 EKETEYR|SK 0.105 .
NF0016540 929 ETEYRSK|QN 0.078 .
NF0016540 932 YRSKQNK|TE 0.078 .
NF0016540 950 HYDNALK|KV 0.068 .
NF0016540 951 YDNALKK|VS 0.089 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation