NF0017120 | peptidase s58

UniProt_ID:

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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0017120	OTHER	0.999121	0.000619	0.000260

No Results

Fasta :-
>NF0017120 MLQNQLFQEIPFSSIDENILIGHAHNATHTSGCTVIMSSDGEGFLAGVDCRGGATCSRET DLLKPGMLVEKIHACVLSGGSVFGLDCSSGVTRYLCENQVGYHTDVINVPIVCQAALYDL PMFLQDEIDTIPSQQQPNSGSNKGKFHLLPNYYEMGYQACCNARLSIQENARQFNSDNID HHIEMNGNIGAGAGASVGKIHGTQTSMKGGLGTFAIQVGDLKIGALVAVNCFGDVIENGN IIAGCLKKNIQKKDPEVDDLKTCCESNADKFSTIFADTEMVLIEEYLKRKHDLNGFVLKD CDGNDHKQFMNSSSQHAKELQRACTNTTLGVVVIGRNAKFEKSQLSRIAAMAHDGFARSM KPSHTLFDGDSIFVLSTHRDDSQETTTTTTTNTPSNIDKKEYQAPTNLVGSLAAYVVEKA VIRGVKSARSKGGYLAHCDLQFHNKHN
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0017120.fa Sequence name : NF0017120 Sequence length : 447 VALUES OF COMPUTED PARAMETERS Coef20 : 3.537 CoefTot : -0.355 ChDiff : -10 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.471 0.312 0.531 MesoH : -0.188 0.477 -0.182 0.288 MuHd_075 : 25.472 24.804 8.668 7.184 MuHd_095 : 16.976 10.259 4.900 2.919 MuHd_100 : 9.095 4.246 1.954 0.755 MuHd_105 : 5.499 5.662 1.009 0.809 Hmax_075 : 10.383 12.133 0.896 4.445 Hmax_095 : 3.675 5.425 -1.207 2.984 Hmax_100 : -1.500 3.500 -2.277 1.750 Hmax_105 : -1.500 3.850 -2.473 2.252 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9150 0.0850 DFMC : 0.9589 0.0411

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 447 NF0017120 MLQNQLFQEIPFSSIDENILIGHAHNATHTSGCTVIMSSDGEGFLAGVDCRGGATCSRETDLLKPGMLVEKIHACVLSGG 80 SVFGLDCSSGVTRYLCENQVGYHTDVINVPIVCQAALYDLPMFLQDEIDTIPSQQQPNSGSNKGKFHLLPNYYEMGYQAC 160 CNARLSIQENARQFNSDNIDHHIEMNGNIGAGAGASVGKIHGTQTSMKGGLGTFAIQVGDLKIGALVAVNCFGDVIENGN 240 IIAGCLKKNIQKKDPEVDDLKTCCESNADKFSTIFADTEMVLIEEYLKRKHDLNGFVLKDCDGNDHKQFMNSSSQHAKEL 320 QRACTNTTLGVVVIGRNAKFEKSQLSRIAAMAHDGFARSMKPSHTLFDGDSIFVLSTHRDDSQETTTTTTTNTPSNIDKK 400 EYQAPTNLVGSLAAYVVEKAVIRGVKSARSKGGYLAHCDLQFHNKHN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0017120 51 LAGVDCR|GG 0.086 . NF0017120 58 GGATCSR|ET 0.089 . NF0017120 64 RETDLLK|PG 0.061 . NF0017120 71 PGMLVEK|IH 0.063 . NF0017120 93 CSSGVTR|YL 0.155 . NF0017120 143 PNSGSNK|GK 0.087 . NF0017120 145 SGSNKGK|FH 0.076 . NF0017120 164 QACCNAR|LS 0.095 . NF0017120 172 SIQENAR|QF 0.087 . NF0017120 199 AGASVGK|IH 0.086 . NF0017120 208 GTQTSMK|GG 0.065 . NF0017120 222 IQVGDLK|IG 0.053 . NF0017120 247 IIAGCLK|KN 0.062 . NF0017120 248 IAGCLKK|NI 0.118 . NF0017120 252 LKKNIQK|KD 0.060 . NF0017120 253 KKNIQKK|DP 0.140 . NF0017120 261 PEVDDLK|TC 0.055 . NF0017120 270 CESNADK|FS 0.076 . NF0017120 288 LIEEYLK|RK 0.054 . NF0017120 289 IEEYLKR|KH 0.150 . NF0017120 290 EEYLKRK|HD 0.076 . NF0017120 299 LNGFVLK|DC 0.086 . NF0017120 307 CDGNDHK|QF 0.061 . NF0017120 318 SSSQHAK|EL 0.093 . NF0017120 322 HAKELQR|AC 0.081 . NF0017120 336 GVVVIGR|NA 0.096 . NF0017120 339 VIGRNAK|FE 0.152 . NF0017120 342 RNAKFEK|SQ 0.084 . NF0017120 347 EKSQLSR|IA 0.144 . NF0017120 358 AHDGFAR|SM 0.158 . NF0017120 361 GFARSMK|PS 0.208 . NF0017120 379 FVLSTHR|DD 0.096 . NF0017120 399 TPSNIDK|KE 0.083 . NF0017120 400 PSNIDKK|EY 0.101 . NF0017120 419 AAYVVEK|AV 0.098 . NF0017120 423 VEKAVIR|GV 0.113 . NF0017120 426 AVIRGVK|SA 0.221 . NF0017120 429 RGVKSAR|SK 0.271 . NF0017120 431 VKSARSK|GG 0.071 . NF0017120 445 DLQFHNK|HN 0.073 . ____________________________^_________________

Fasta :-
>NF0017120 ATGCTCCAAAACCAACTCTTTCAGGAAATTCCATTTTCGAGTATTGATGAAAATATTTTA ATTGGACATGCACACAACGCAACCCACACATCGGGATGTACTGTGATTATGAGTAGCGAT GGAGAGGGTTTTCTGGCTGGAGTTGACTGTCGTGGAGGTGCCACATGCAGCAGGGAGACT GATTTATTGAAACCTGGAATGTTGGTAGAGAAAATTCATGCTTGTGTTCTTTCAGGAGGA AGTGTTTTTGGCTTAGATTGTTCTTCAGGAGTGACAAGATATTTGTGTGAAAATCAAGTG GGCTACCATACAGATGTTATCAATGTTCCAATTGTGTGTCAAGCTGCTCTTTATGACTTG CCAATGTTTTTACAAGATGAAATTGACACCATTCCGTCGCAACAGCAACCAAACAGCGGC TCAAATAAGGGAAAATTTCATTTACTACCTAATTATTATGAAATGGGTTATCAAGCATGT TGCAATGCTCGCTTATCCATTCAAGAAAATGCACGCCAATTTAATAGTGACAACATCGAT CATCATATTGAAATGAATGGAAATATCGGAGCTGGAGCTGGAGCAAGTGTCGGCAAAATT CATGGAACTCAAACTTCAATGAAAGGAGGACTTGGAACTTTTGCAATTCAAGTGGGTGAT TTAAAAATTGGAGCTCTTGTGGCAGTTAATTGTTTTGGTGATGTTATTGAAAATGGAAAT ATCATTGCTGGATGTCTGAAAAAGAATATTCAGAAAAAAGACCCTGAAGTGGATGACCTT AAAACTTGTTGTGAATCGAATGCCGACAAGTTTTCAACAATTTTTGCAGATACTGAAATG GTATTGATTGAAGAGTACTTGAAGAGAAAACATGATCTCAATGGATTTGTCTTAAAGGAT TGTGATGGAAATGATCACAAACAATTTATGAATTCTTCAAGTCAACACGCAAAGGAACTT CAACGAGCTTGCACCAACACAACATTGGGTGTGGTAGTTATTGGCAGGAATGCAAAATTT GAAAAGTCCCAACTATCTAGAATTGCAGCAATGGCACATGATGGATTTGCGAGATCCATG AAGCCCTCTCACACTCTCTTCGATGGTGATTCGATTTTTGTTCTCTCGACTCATCGTGAC GACAGCCAAGAAACCACCACCACCACCACAACAAACACTCCATCGAATATTGATAAGAAG GAATATCAAGCTCCAACCAATTTAGTTGGATCATTGGCTGCCTATGTGGTGGAAAAGGCT GTTATCAGAGGTGTAAAAAGTGCCCGATCAAAGGGAGGATATCTCGCCCATTGTGATTTA CAGTTTCATAATAAACACAACTAA
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Fasta :-

MLQNQLFQEIPFSSIDENILIGHAHNATHTSGCTVIMSSDGEGFLAGVDCRGGATCSRET DLLKPGMLVEKIHACVLSGGSVFGLDCSSGVTRYLCENQVGYHTDVINVPIVCQAALYDL PMFLQDEIDTIPSQQQPNSGSNKGKFHLLPNYYEMGYQACCNARLSIQENARQFNSDNID HHIEMNGNIGAGAGASVGKIHGTQTSMKGGLGTFAIQVGDLKIGALVAVNCFGDVIENGN IIAGCLKKNIQKKDPEVDDLKTCCESNADKFSTIFADTEMVLIEEYLKRKHDLNGFVLKD CDGNDHKQFMNSSSQHAKELQRACTNTTLGVVVIGRNAKFEKSQLSRIAAMAHDGFARSM KPSHTLFDGDSIFVLSTHRDDSQETTTTTTTNTPSNIDKKEYQAPTNLVGSLAAYVVEKA VIRGVKSARSKGGYLAHCDLQFHNKHN

SCOPe

title: putative active site pocket
coordinates: A116,L117,Y118,A228,N230,T327,D368,G369

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0017120	T	391	0.585	0.082	NF0017120	T	390	0.538	0.154	NF0017120	T	389	0.513	0.022

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	NF0017120	T	391	0.585	0.082	NF0017120	T	390	0.538	0.154	NF0017120	T	389	0.513	0.022

	ID	Site	Peptide	Score	Method
	NF0017120	382 S	HRDDSQETT	0.997	unsp

NF0017120 | peptidase s58

ID's

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GEO Functions

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

SCOPe

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India