NF0017520 | ubiquitin carboxyl-terminal hydrolase isozyme l5-like

_IDPredictionOTHERSPmTPCS_Position
NF0017520OTHER0.9999820.0000120.000006
No Results

  • Fasta :-

    >NF0017520 MSASNAWSTIESDPGVFTELIEKFGVKGLQVEELWSLDSETLSELKPIYGLIFLFKWVGE KDERPALEQTPENMFYAQQIVTNACATQAILSILMNIDTTTEKVELGEELTQFKSFSLGL PPDVIGETIGASEMIKEAHNSFARPEPFIIEESKKPKKDEDVFHFIAYLPFKGHLYELDG LKGGPILLGECTQDNWLEKVVPEIQNRINKYAQTEIKFNLMAVVRNRKDALLEELNSLPQ TPENMDKISILQEKIQMEEEKRANWKQENARRRHNYVPFLVNLLKVLAEEKELLPLIERA KEQSAAKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0017520.fa Sequence name : NF0017520 Sequence length : 308 VALUES OF COMPUTED PARAMETERS Coef20 : 3.886 CoefTot : 0.484 ChDiff : -14 ZoneTo : 10 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.041 1.318 0.101 0.497 MesoH : -0.569 0.191 -0.415 0.207 MuHd_075 : 6.367 9.585 0.962 3.106 MuHd_095 : 3.074 5.410 0.835 2.286 MuHd_100 : 3.961 9.695 1.743 3.199 MuHd_105 : 4.900 13.191 2.785 3.935 Hmax_075 : 11.600 5.500 0.183 3.190 Hmax_095 : 11.813 6.037 0.353 3.973 Hmax_100 : 12.900 8.300 0.523 4.720 Hmax_105 : 12.483 13.533 0.408 4.713 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9648 0.0352 DFMC : 0.9554 0.0446
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 308 NF0017520 MSASNAWSTIESDPGVFTELIEKFGVKGLQVEELWSLDSETLSELKPIYGLIFLFKWVGEKDERPALEQTPENMFYAQQI 80 VTNACATQAILSILMNIDTTTEKVELGEELTQFKSFSLGLPPDVIGETIGASEMIKEAHNSFARPEPFIIEESKKPKKDE 160 DVFHFIAYLPFKGHLYELDGLKGGPILLGECTQDNWLEKVVPEIQNRINKYAQTEIKFNLMAVVRNRKDALLEELNSLPQ 240 TPENMDKISILQEKIQMEEEKRANWKQENARRRHNYVPFLVNLLKVLAEEKELLPLIERAKEQSAAKK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0017520 23 FTELIEK|FG 0.060 . NF0017520 27 IEKFGVK|GL 0.074 . NF0017520 46 ETLSELK|PI 0.057 . NF0017520 56 GLIFLFK|WV 0.106 . NF0017520 61 FKWVGEK|DE 0.073 . NF0017520 64 VGEKDER|PA 0.082 . NF0017520 103 IDTTTEK|VE 0.056 . NF0017520 114 EELTQFK|SF 0.080 . NF0017520 136 GASEMIK|EA 0.081 . NF0017520 144 AHNSFAR|PE 0.086 . NF0017520 154 FIIEESK|KP 0.063 . NF0017520 155 IIEESKK|PK 0.103 . NF0017520 157 EESKKPK|KD 0.103 . NF0017520 158 ESKKPKK|DE 0.118 . NF0017520 172 IAYLPFK|GH 0.069 . NF0017520 182 YELDGLK|GG 0.055 . NF0017520 199 QDNWLEK|VV 0.083 . NF0017520 207 VPEIQNR|IN 0.089 . NF0017520 210 IQNRINK|YA 0.221 . NF0017520 217 YAQTEIK|FN 0.064 . NF0017520 225 NLMAVVR|NR 0.090 . NF0017520 227 MAVVRNR|KD 0.085 . NF0017520 228 AVVRNRK|DA 0.227 . NF0017520 247 TPENMDK|IS 0.073 . NF0017520 254 ISILQEK|IQ 0.070 . NF0017520 261 IQMEEEK|RA 0.077 . NF0017520 262 QMEEEKR|AN 0.221 . NF0017520 266 EKRANWK|QE 0.071 . NF0017520 271 WKQENAR|RR 0.090 . NF0017520 272 KQENARR|RH 0.114 . NF0017520 273 QENARRR|HN 0.145 . NF0017520 285 FLVNLLK|VL 0.058 . NF0017520 291 KVLAEEK|EL 0.055 . NF0017520 299 LLPLIER|AK 0.076 . NF0017520 301 PLIERAK|EQ 0.069 . NF0017520 307 KEQSAAK|K- 0.066 . NF0017520 308 EQSAAKK|-- 0.132 . ____________________________^_________________

  • Fasta :-

    >NF0017520 ATGTCTGCTTCCAATGCATGGAGTACCATTGAGAGCGATCCAGGAGTGTTTACCGAGTTG ATTGAAAAATTTGGAGTCAAAGGGTTACAAGTAGAAGAGTTGTGGTCATTAGACTCGGAA ACGCTGTCGGAATTAAAACCAATTTACGGATTGATCTTTCTTTTCAAATGGGTGGGCGAA AAGGATGAAAGACCTGCTCTTGAACAAACTCCAGAAAACATGTTTTATGCTCAACAGATC GTTACCAATGCATGTGCTACACAAGCTATTTTGTCAATTTTGATGAATATCGATACAACC ACTGAAAAAGTAGAACTCGGAGAAGAATTGACTCAATTCAAGTCTTTTTCTTTGGGGCTT CCTCCTGATGTTATCGGAGAGACTATTGGTGCTAGTGAAATGATCAAAGAAGCCCACAAT TCATTTGCAAGACCTGAACCTTTTATTATTGAAGAGAGCAAAAAACCAAAGAAAGACGAA GATGTTTTCCACTTTATTGCATATTTACCTTTCAAAGGACATTTATATGAATTGGATGGC TTGAAAGGAGGACCAATTTTGCTTGGAGAATGTACTCAAGACAATTGGTTAGAAAAAGTC GTTCCAGAAATTCAAAACAGAATTAACAAGTATGCTCAAACAGAAATTAAGTTTAATTTG ATGGCTGTGGTTAGAAACCGAAAGGATGCACTTTTGGAAGAATTAAATAGCCTTCCTCAA ACACCTGAAAATATGGATAAGATTTCAATTCTGCAAGAGAAGATTCAAATGGAAGAAGAG AAACGAGCAAATTGGAAACAAGAGAATGCACGAAGAAGACACAACTACGTGCCATTCCTT GTAAACTTATTGAAAGTCTTGGCCGAAGAGAAAGAACTTCTTCCACTTATTGAACGAGCA AAAGAACAGTCTGCTGCTAAAAAGTAA
  • Download Fasta

  • Fasta :-

    MSASNAWSTIESDPGVFTELIEKFGVKGLQVEELWSLDSETLSELKPIYGLIFLFKWVGE KDERPALEQTPENMFYAQQIVTNACATQAILSILMNIDTTTEKVELGEELTQFKSFSLGL PPDVIGETIGASEMIKEAHNSFARPEPFIIEESKKPKKDEDVFHFIAYLPFKGHLYELDG LKGGPILLGECTQDNWLEKVVPEIQNRINKYAQTEIKFNLMAVVRNRKDALLEELNSLPQ TPENMDKISILQEKIQMEEEKRANWKQENARRRHNYVPFLVNLLKVLAEEKELLPLIERA KEQSAAKK

  • title: catalytic site
  • coordinates: Q79,C85,H164,D179
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0017520S20.5230.065NF0017520S40.5130.023
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0017520S20.5230.065NF0017520S40.5130.023
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India