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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0021290.fa
Sequence name : NF0021290
Sequence length : 615
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.355
CoefTot : -0.383
ChDiff : 4
ZoneTo : 21
KR : 6
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.906 1.418 0.086 0.587
MesoH : -0.468 0.170 -0.386 0.175
MuHd_075 : 25.414 12.432 7.350 4.964
MuHd_095 : 37.915 15.239 11.169 5.507
MuHd_100 : 29.228 12.814 9.242 4.623
MuHd_105 : 24.361 11.003 8.264 4.295
Hmax_075 : -0.933 -2.800 -2.973 -0.793
Hmax_095 : 0.000 -3.800 -2.750 -1.356
Hmax_100 : -0.600 -3.700 -2.315 -0.810
Hmax_105 : 7.933 -1.750 0.069 0.898
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.2998 0.7002
DFMC : 0.2958 0.7042
This protein is probably imported in chloroplast.
f(Ser) = 0.2381 f(Arg) = 0.0952 CMi = 1.17096
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
615 NF0021290
MKKSTRKRTSNTSKASSNGNGDKVEQSLSVASSDAAIIEADAVSAIQMTTFPKSLQCSHFRDFVKCKAKRKHNGNCIANG 80
HIGIDDYEELVGLNENLIDLGNGKLKFEQTQHCTCCENPFSLIDEAVICSNCYHIFTVHTFYEKKSSFEKAEPKQLKYCP 160
NCKDNAIVFHLTYKEFFCLECFDFITLDFEAIKYILLPCLFKSANQELPNEKQATSTKKKRKFSHPKSGTETVPHISVGE 240
SIKSMLKNNVQTQTNPLIGLRGIVNLGNTCFMNCILQTLAHNVSLRNYYLSGVYSQLIEKEIENDSKCKNFEDIQTYLKM 320
SRAMNNLFKEMYDKSCNELENSNIKKRSSNGKRKSDTVDEQPIVLPYVPHQFLYIMWNIAGHLAGYQQQDAHEFYMAILS 400
ALTPAKLPNNRRNLIEDLFTGTSQSDLNCKICSSISSTVEAFMDISLPLKAKSGDTWIELESLTECLERYTRDENLDISS 480
YSCKNCGSQGNFSKQIRFKRLPYVLCFHLKRFEHSEVNRNRRTAGVSSKIDWFVSFPLQIEMKDFVVGEDGGVPDNKYSL 560
FSVVCHHGDLSGGHYTCYVKHNSRWFLCNDSSVYYAKESDVLNSEAYLLFYERAR 640
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
..........................P..................................................... 400
................................................................................ 480
.........................................P...................................... 560
....................................................... 640
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2
Name Pos Context Score Pred
____________________________v_________________
NF0021290 2 -----MK|KS 0.067 .
NF0021290 3 ----MKK|ST 0.162 .
NF0021290 6 -MKKSTR|KR 0.078 .
NF0021290 7 MKKSTRK|RT 0.081 .
NF0021290 8 KKSTRKR|TS 0.320 .
NF0021290 14 RTSNTSK|AS 0.098 .
NF0021290 23 SNGNGDK|VE 0.057 .
NF0021290 53 QMTTFPK|SL 0.077 .
NF0021290 61 LQCSHFR|DF 0.099 .
NF0021290 65 HFRDFVK|CK 0.066 .
NF0021290 67 RDFVKCK|AK 0.079 .
NF0021290 69 FVKCKAK|RK 0.069 .
NF0021290 70 VKCKAKR|KH 0.142 .
NF0021290 71 KCKAKRK|HN 0.110 .
NF0021290 104 IDLGNGK|LK 0.059 .
NF0021290 106 LGNGKLK|FE 0.076 .
NF0021290 144 VHTFYEK|KS 0.056 .
NF0021290 145 HTFYEKK|SS 0.130 .
NF0021290 150 KKSSFEK|AE 0.076 .
NF0021290 154 FEKAEPK|QL 0.065 .
NF0021290 157 AEPKQLK|YC 0.066 .
NF0021290 163 KYCPNCK|DN 0.074 .
NF0021290 174 VFHLTYK|EF 0.061 .
NF0021290 193 LDFEAIK|YI 0.055 .
NF0021290 202 LLPCLFK|SA 0.099 .
NF0021290 212 QELPNEK|QA 0.058 .
NF0021290 218 KQATSTK|KK 0.063 .
NF0021290 219 QATSTKK|KR 0.080 .
NF0021290 220 ATSTKKK|RK 0.126 .
NF0021290 221 TSTKKKR|KF 0.231 .
NF0021290 222 STKKKRK|FS 0.161 .
NF0021290 227 RKFSHPK|SG 0.097 .
NF0021290 243 SVGESIK|SM 0.078 .
NF0021290 247 SIKSMLK|NN 0.057 .
NF0021290 261 NPLIGLR|GI 0.088 .
NF0021290 286 AHNVSLR|NY 0.098 .
NF0021290 300 YSQLIEK|EI 0.060 .
NF0021290 307 EIENDSK|CK 0.061 .
NF0021290 309 ENDSKCK|NF 0.082 .
NF0021290 319 DIQTYLK|MS 0.060 .
NF0021290 322 TYLKMSR|AM 0.080 .
NF0021290 329 AMNNLFK|EM 0.068 .
NF0021290 334 FKEMYDK|SC 0.084 .
NF0021290 345 LENSNIK|KR 0.062 .
NF0021290 346 ENSNIKK|RS 0.133 .
NF0021290 347 NSNIKKR|SS 0.528 *ProP*
NF0021290 352 KRSSNGK|RK 0.092 .
NF0021290 353 RSSNGKR|KS 0.354 .
NF0021290 354 SSNGKRK|SD 0.179 .
NF0021290 406 SALTPAK|LP 0.060 .
NF0021290 411 AKLPNNR|RN 0.066 .
NF0021290 412 KLPNNRR|NL 0.152 .
NF0021290 430 QSDLNCK|IC 0.065 .
NF0021290 450 DISLPLK|AK 0.065 .
NF0021290 452 SLPLKAK|SG 0.097 .
NF0021290 469 LTECLER|YT 0.101 .
NF0021290 472 CLERYTR|DE 0.160 .
NF0021290 484 ISSYSCK|NC 0.100 .
NF0021290 494 SQGNFSK|QI 0.072 .
NF0021290 497 NFSKQIR|FK 0.090 .
NF0021290 499 SKQIRFK|RL 0.073 .
NF0021290 500 KQIRFKR|LP 0.394 .
NF0021290 510 VLCFHLK|RF 0.074 .
NF0021290 511 LCFHLKR|FE 0.160 .
NF0021290 519 EHSEVNR|NR 0.107 .
NF0021290 521 SEVNRNR|RT 0.090 .
NF0021290 522 EVNRNRR|TA 0.572 *ProP*
NF0021290 529 TAGVSSK|ID 0.064 .
NF0021290 543 PLQIEMK|DF 0.088 .
NF0021290 557 GGVPDNK|YS 0.064 .
NF0021290 580 HYTCYVK|HN 0.058 .
NF0021290 584 YVKHNSR|WF 0.072 .
NF0021290 597 SSVYYAK|ES 0.070 .
NF0021290 613 YLLFYER|AR 0.073 .
NF0021290 615 LFYERAR|-- 0.094 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation