NF0022530 | 26s protease regulatory subunit 6b homolog

_IDPredictionOTHERSPmTPCS_Position
NF0022530OTHER0.9999860.0000010.000013
No Results

  • Fasta :-

    >NF0022530 MDELGLGKKKQSPGGADQMDVDEVSAQAQATEQQDELSVLLKPLQELSEQDLYKKLKHIE SELEFHDIQEEYVKYEQKNLKRELLRAKEEVKRIKSVPLVIGQFLEMIDQNTGIISSTTG SSSHVRILSTIDRELLKPNASVALHRHSSALVEVLPPEADSSIQLVGANERPDVTYADIG GLDIQKQEIREAVELPLTHFGLYEQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFI RVVGSEFVQKYLGEGPRMVRDVFRLARENAPAIVFIDEVDSIATKRFDAQTGADREVQRI LLELLTQMDGFEQTTNVKVIMATNRWDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC TSKMNLAEDVDLEDYVSRPDKISCAEIAAICQEAGMQAVRKNRYVVTAKDFEKGYKTHVR KTDGDHEYLLR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0022530.fa Sequence name : NF0022530 Sequence length : 431 VALUES OF COMPUTED PARAMETERS Coef20 : 2.378 CoefTot : 0.000 ChDiff : -11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.471 0.971 -0.028 0.446 MesoH : -0.594 0.249 -0.401 0.212 MuHd_075 : 25.440 13.495 6.699 4.060 MuHd_095 : 23.791 11.207 5.893 2.678 MuHd_100 : 22.683 8.495 4.917 2.174 MuHd_105 : 12.466 1.583 1.910 0.694 Hmax_075 : 0.467 0.700 -2.050 1.960 Hmax_095 : 1.600 2.000 -1.769 1.640 Hmax_100 : 1.600 2.000 -1.769 1.640 Hmax_105 : -6.825 -3.500 -4.712 0.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9870 0.0130 DFMC : 0.9771 0.0229
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 431 NF0022530 MDELGLGKKKQSPGGADQMDVDEVSAQAQATEQQDELSVLLKPLQELSEQDLYKKLKHIESELEFHDIQEEYVKYEQKNL 80 KRELLRAKEEVKRIKSVPLVIGQFLEMIDQNTGIISSTTGSSSHVRILSTIDRELLKPNASVALHRHSSALVEVLPPEAD 160 SSIQLVGANERPDVTYADIGGLDIQKQEIREAVELPLTHFGLYEQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFI 240 RVVGSEFVQKYLGEGPRMVRDVFRLARENAPAIVFIDEVDSIATKRFDAQTGADREVQRILLELLTQMDGFEQTTNVKVI 320 MATNRWDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLAEDVDLEDYVSRPDKISCAEIAAICQEAGMQAVR 400 KNRYVVTAKDFEKGYKTHVRKTDGDHEYLLR 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................P.............................................. 400 ............................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NF0022530 8 DELGLGK|KK 0.053 . NF0022530 9 ELGLGKK|KQ 0.101 . NF0022530 10 LGLGKKK|QS 0.118 . NF0022530 42 ELSVLLK|PL 0.066 . NF0022530 54 SEQDLYK|KL 0.080 . NF0022530 55 EQDLYKK|LK 0.072 . NF0022530 57 DLYKKLK|HI 0.087 . NF0022530 74 IQEEYVK|YE 0.064 . NF0022530 78 YVKYEQK|NL 0.061 . NF0022530 81 YEQKNLK|RE 0.051 . NF0022530 82 EQKNLKR|EL 0.135 . NF0022530 86 LKRELLR|AK 0.110 . NF0022530 88 RELLRAK|EE 0.060 . NF0022530 92 RAKEEVK|RI 0.061 . NF0022530 93 AKEEVKR|IK 0.159 . NF0022530 95 EEVKRIK|SV 0.123 . NF0022530 126 GSSSHVR|IL 0.188 . NF0022530 133 ILSTIDR|EL 0.088 . NF0022530 137 IDRELLK|PN 0.061 . NF0022530 146 ASVALHR|HS 0.113 . NF0022530 171 LVGANER|PD 0.071 . NF0022530 186 GGLDIQK|QE 0.056 . NF0022530 190 IQKQEIR|EA 0.093 . NF0022530 212 IGIDPPR|GV 0.129 . NF0022530 224 GPPGTGK|TM 0.059 . NF0022530 229 GKTMLAK|AV 0.088 . NF0022530 241 TTAAFIR|VV 0.214 . NF0022530 250 GSEFVQK|YL 0.120 . NF0022530 257 YLGEGPR|MV 0.154 . NF0022530 260 EGPRMVR|DV 0.294 . NF0022530 264 MVRDVFR|LA 0.125 . NF0022530 267 DVFRLAR|EN 0.209 . NF0022530 285 VDSIATK|RF 0.069 . NF0022530 286 DSIATKR|FD 0.204 . NF0022530 295 AQTGADR|EV 0.095 . NF0022530 299 ADREVQR|IL 0.115 . NF0022530 318 EQTTNVK|VI 0.058 . NF0022530 325 VIMATNR|WD 0.076 . NF0022530 335 LDPALLR|PG 0.068 . NF0022530 338 ALLRPGR|LD 0.217 . NF0022530 341 RPGRLDR|KI 0.309 . NF0022530 342 PGRLDRK|IE 0.069 . NF0022530 350 EFPLPDR|RQ 0.062 . NF0022530 351 FPLPDRR|QK 0.102 . NF0022530 353 LPDRRQK|RL 0.123 . NF0022530 354 PDRRQKR|LV 0.796 *ProP* NF0022530 363 FQVCTSK|MN 0.059 . NF0022530 378 LEDYVSR|PD 0.078 . NF0022530 381 YVSRPDK|IS 0.201 . NF0022530 400 AGMQAVR|KN 0.082 . NF0022530 401 GMQAVRK|NR 0.083 . NF0022530 403 QAVRKNR|YV 0.495 . NF0022530 409 RYVVTAK|DF 0.102 . NF0022530 413 TAKDFEK|GY 0.072 . NF0022530 416 DFEKGYK|TH 0.056 . NF0022530 420 GYKTHVR|KT 0.105 . NF0022530 421 YKTHVRK|TD 0.111 . NF0022530 431 DHEYLLR|-- 0.080 . ____________________________^_________________

  • Fasta :-

    >NF0022530 ATGGACGAATTAGGCCTCGGAAAGAAGAAACAATCACCAGGCGGTGCTGATCAAATGGAT GTTGATGAAGTCAGCGCTCAAGCACAAGCTACCGAACAACAGGATGAATTGAGCGTGCTT CTCAAACCTCTTCAAGAACTTTCCGAACAAGATCTCTACAAAAAGCTTAAACATATTGAG AGTGAGCTTGAATTTCATGATATCCAAGAAGAATATGTCAAGTACGAACAAAAGAACTTG AAAAGAGAATTATTAAGAGCCAAAGAGGAGGTGAAACGAATCAAATCAGTACCTCTCGTA ATTGGACAATTCTTGGAAATGATTGATCAAAATACTGGAATTATTTCTTCAACAACTGGC TCATCGAGTCATGTTCGAATCTTGAGCACGATTGACAGAGAATTATTGAAGCCCAATGCT TCAGTTGCCCTACACAGACATTCAAGTGCTTTGGTAGAGGTTTTACCCCCTGAAGCAGAC AGTAGTATTCAATTGGTTGGAGCTAATGAACGACCTGATGTTACCTACGCAGATATTGGA GGTTTAGATATTCAAAAACAAGAAATTAGAGAGGCCGTTGAGCTTCCACTGACACACTTT GGATTATATGAACAAATTGGTATCGATCCACCAAGAGGTGTTTTATTGTATGGACCTCCT GGTACTGGAAAGACCATGTTGGCCAAAGCAGTTGCCCACCATACCACTGCTGCTTTCATT AGAGTAGTTGGTTCAGAATTTGTACAAAAGTATCTCGGTGAAGGTCCAAGAATGGTTCGT GACGTGTTCAGATTGGCTCGTGAAAATGCACCTGCTATTGTTTTCATTGACGAAGTCGAT TCAATTGCTACCAAACGTTTTGATGCTCAAACAGGAGCCGATCGTGAGGTACAACGTATT TTGCTCGAGTTGTTGACACAAATGGATGGTTTCGAACAAACTACCAATGTCAAAGTGATC ATGGCTACCAATAGATGGGATACTTTGGATCCTGCTTTGCTTCGTCCAGGTCGTTTGGAT AGAAAGATTGAGTTCCCACTACCAGACCGTCGACAAAAACGTTTGGTATTCCAAGTTTGT ACCAGTAAGATGAATTTAGCAGAAGACGTTGATTTGGAAGATTATGTTTCCCGTCCTGAC AAGATATCATGTGCTGAGATTGCAGCGATTTGTCAAGAGGCAGGTATGCAAGCTGTGAGA AAGAACAGATATGTCGTCACGGCCAAAGATTTTGAAAAGGGCTACAAGACCCACGTGAGA AAGACTGATGGCGATCATGAATACTTGTTACGTTAA
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  • Fasta :-

    MDELGLGKKKQSPGGADQMDVDEVSAQAQATEQQDELSVLLKPLQELSEQDLYKKLKHIE SELEFHDIQEEYVKYEQKNLKRELLRAKEEVKRIKSVPLVIGQFLEMIDQNTGIISSTTG SSSHVRILSTIDRELLKPNASVALHRHSSALVEVLPPEADSSIQLVGANERPDVTYADIG GLDIQKQEIREAVELPLTHFGLYEQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFI RVVGSEFVQKYLGEGPRMVRDVFRLARENAPAIVFIDEVDSIATKRFDAQTGADREVQRI LLELLTQMDGFEQTTNVKVIMATNRWDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC TSKMNLAEDVDLEDYVSRPDKISCAEIAAICQEAGMQAVRKNRYVVTAKDFEKGYKTHVR KTDGDHEYLLR

  • title: ATP binding site
  • coordinates: P219,P220,G221,T222,G223,K224,T225,M226,D277,N324
No Results
No Results
IDSitePeptideScoreMethod
NF002253012 SKKKQSPGGA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India