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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0023550.fa
Sequence name : NF0023550
Sequence length : 1092
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.493
CoefTot : -0.759
ChDiff : -17
ZoneTo : 39
KR : 9
DE : 1
CleavSite : 13
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.153 1.159 0.082 0.556
MesoH : -0.227 0.457 -0.290 0.306
MuHd_075 : 51.344 29.063 12.454 12.512
MuHd_095 : 36.934 15.890 10.860 6.581
MuHd_100 : 32.828 13.931 8.980 5.843
MuHd_105 : 27.876 17.751 7.574 6.750
Hmax_075 : 13.067 16.200 2.686 5.580
Hmax_095 : 11.200 9.000 1.527 2.791
Hmax_100 : 11.200 2.300 1.527 2.670
Hmax_105 : 8.500 5.200 -0.594 3.120
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0471 0.9529
DFMC : 0.0338 0.9662
This protein is probably imported in mitochondria.
f(Ser) = 0.1795 f(Arg) = 0.1026 CMi = 0.84034
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
1092 NF0023550
MRKLVGTRHLRSEGTKRLVFSSSLSSGKSLKKHQNGLGVEDAKSSSLLFNDGSGRRGGIRLMMEACESFQERNFHHPMNP 80
HRKELQSVVYQEKSLKEGDVIDGWVLETIQELKEFDLVAYRLKHTQTGAEYLHLDAPFDMNNCFAITFETPPNDDTGIPH 160
ILEHTTLCGSEKYPVRDLFFNMMKRSLNTYMNAYTASDHTTYPFSTQNEKDFYNLMSVYLDSTLKPRILNTDFKQEGHRL 240
EFENPLDPNSPLKIKGVVYNEMKGAMSDSNQFFGTQLHKAILPGTIYAFNSGGEPQAIPNLTYEELKNFHKQNYHPSRAK 320
IFTYGCFSFLKHIKFMNENAFSKFSALPPRKVPKQVKRFTEPKRVEVLGPPDSMVIDEQKQTKFAIAYVMNDKSDAFETF 400
SLSFLSALLMDEPRGVFYKNIIASGLAPDFAPYCGFDSSVGDPIFTIGAQGIAKDQVEAVEKAIDDTFHEVIENGIDQGL 480
IDTVLHSLELSIKKKSPNFGVNICFPVFSNWIHNDDPISTFKINYYLDRLRKELENPNFFKDKIKKYFLNNTHKVIFVMN 560
PDPNYFDKQEAMEAAKLDSIVMALSDSDKTRIVEEYKEMEETKVEQAKNVEILPTLTVDDLSRKIIDVQMVQLVKEKAEP 640
EFHMNVVKGTNGIIHVTSIVPFSLGEVPEHLQKFVPIFGDLLVRVGTSKWNYLQLAHQIELYTGGVDASPVLVPSLEKID 720
EFSFALKFSSYCLERNAEKMVDLMREIYTDVNFLGDLNFLQNCIDQAASDAASGILHSGHHYAKTHAAANISFYDSLINA 800
TSGIDAMRFLKQLSTEANTELIATSLQELVPYLLRKRKMKILITCEEHQRDRMMRIMERQFYEAIENETVTSEAKMKAQL 880
EFKPKFINTYLSIPSSVSFVGRALVTTPFATKDSALLRVVSSILHSNYLHQEVRERGGAYGSNASQSMNGVFTFSSYRDP 960
NPNRTIGICSNVAEWIQMKDSVTPKTIQEAKLQVFQHLDSPVTPHAHAQSKVVFGIDDELRQFRRNVILDATRNEIIDTC 1040
VKYLSNSNVATTIIGGNFEKDISNETQRKWVVVREEMDNSFNDMQSNNTMTQ 1120
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
................................................................................ 720
................................................................................ 800
................................................................................ 880
................................................................................ 960
................................................................................ 1040
.................................................... 1120
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0023550 2 -----MR|KL 0.089 .
NF0023550 3 ----MRK|LV 0.113 .
NF0023550 8 RKLVGTR|HL 0.086 .
NF0023550 11 VGTRHLR|SE 0.383 .
NF0023550 16 LRSEGTK|RL 0.064 .
NF0023550 17 RSEGTKR|LV 0.228 .
NF0023550 28 SSLSSGK|SL 0.097 .
NF0023550 31 SSGKSLK|KH 0.073 .
NF0023550 32 SGKSLKK|HQ 0.091 .
NF0023550 43 LGVEDAK|SS 0.080 .
NF0023550 55 FNDGSGR|RG 0.091 .
NF0023550 56 NDGSGRR|GG 0.103 .
NF0023550 60 GRRGGIR|LM 0.100 .
NF0023550 72 CESFQER|NF 0.112 .
NF0023550 82 HPMNPHR|KE 0.097 .
NF0023550 83 PMNPHRK|EL 0.112 .
NF0023550 93 SVVYQEK|SL 0.083 .
NF0023550 96 YQEKSLK|EG 0.065 .
NF0023550 113 ETIQELK|EF 0.055 .
NF0023550 121 FDLVAYR|LK 0.083 .
NF0023550 123 LVAYRLK|HT 0.072 .
NF0023550 172 TLCGSEK|YP 0.066 .
NF0023550 176 SEKYPVR|DL 0.104 .
NF0023550 184 LFFNMMK|RS 0.056 .
NF0023550 185 FFNMMKR|SL 0.324 .
NF0023550 210 FSTQNEK|DF 0.062 .
NF0023550 225 YLDSTLK|PR 0.052 .
NF0023550 227 DSTLKPR|IL 0.098 .
NF0023550 234 ILNTDFK|QE 0.078 .
NF0023550 239 FKQEGHR|LE 0.072 .
NF0023550 253 DPNSPLK|IK 0.080 .
NF0023550 255 NSPLKIK|GV 0.081 .
NF0023550 263 VVYNEMK|GA 0.068 .
NF0023550 279 FGTQLHK|AI 0.062 .
NF0023550 307 LTYEELK|NF 0.065 .
NF0023550 311 ELKNFHK|QN 0.061 .
NF0023550 318 QNYHPSR|AK 0.109 .
NF0023550 320 YHPSRAK|IF 0.065 .
NF0023550 331 GCFSFLK|HI 0.062 .
NF0023550 334 SFLKHIK|FM 0.068 .
NF0023550 343 NENAFSK|FS 0.062 .
NF0023550 350 FSALPPR|KV 0.159 .
NF0023550 351 SALPPRK|VP 0.071 .
NF0023550 354 PPRKVPK|QV 0.099 .
NF0023550 357 KVPKQVK|RF 0.058 .
NF0023550 358 VPKQVKR|FT 0.425 .
NF0023550 363 KRFTEPK|RV 0.091 .
NF0023550 364 RFTEPKR|VE 0.124 .
NF0023550 380 MVIDEQK|QT 0.066 .
NF0023550 383 DEQKQTK|FA 0.092 .
NF0023550 393 AYVMNDK|SD 0.066 .
NF0023550 414 LLMDEPR|GV 0.133 .
NF0023550 419 PRGVFYK|NI 0.098 .
NF0023550 454 GAQGIAK|DQ 0.071 .
NF0023550 462 QVEAVEK|AI 0.078 .
NF0023550 493 SLELSIK|KK 0.067 .
NF0023550 494 LELSIKK|KS 0.072 .
NF0023550 495 ELSIKKK|SP 0.196 .
NF0023550 522 DPISTFK|IN 0.060 .
NF0023550 529 INYYLDR|LR 0.079 .
NF0023550 531 YYLDRLR|KE 0.062 .
NF0023550 532 YLDRLRK|EL 0.162 .
NF0023550 541 ENPNFFK|DK 0.077 .
NF0023550 543 PNFFKDK|IK 0.072 .
NF0023550 545 FFKDKIK|KY 0.066 .
NF0023550 546 FKDKIKK|YF 0.097 .
NF0023550 554 FLNNTHK|VI 0.072 .
NF0023550 568 DPNYFDK|QE 0.069 .
NF0023550 576 EAMEAAK|LD 0.066 .
NF0023550 589 ALSDSDK|TR 0.070 .
NF0023550 591 SDSDKTR|IV 0.270 .
NF0023550 597 RIVEEYK|EM 0.061 .
NF0023550 603 KEMEETK|VE 0.063 .
NF0023550 608 TKVEQAK|NV 0.106 .
NF0023550 623 TVDDLSR|KI 0.107 .
NF0023550 624 VDDLSRK|II 0.093 .
NF0023550 635 QMVQLVK|EK 0.059 .
NF0023550 637 VQLVKEK|AE 0.058 .
NF0023550 648 FHMNVVK|GT 0.086 .
NF0023550 673 VPEHLQK|FV 0.075 .
NF0023550 684 FGDLLVR|VG 0.062 .
NF0023550 689 VRVGTSK|WN 0.071 .
NF0023550 718 LVPSLEK|ID 0.055 .
NF0023550 727 EFSFALK|FS 0.077 .
NF0023550 735 SSYCLER|NA 0.138 .
NF0023550 739 LERNAEK|MV 0.077 .
NF0023550 745 KMVDLMR|EI 0.089 .
NF0023550 784 SGHHYAK|TH 0.072 .
NF0023550 808 SGIDAMR|FL 0.097 .
NF0023550 811 DAMRFLK|QL 0.172 .
NF0023550 835 LVPYLLR|KR 0.063 .
NF0023550 836 VPYLLRK|RK 0.096 .
NF0023550 837 PYLLRKR|KM 0.099 .
NF0023550 838 YLLRKRK|MK 0.210 .
NF0023550 840 LRKRKMK|IL 0.276 .
NF0023550 850 TCEEHQR|DR 0.091 .
NF0023550 852 EEHQRDR|MM 0.111 .
NF0023550 855 QRDRMMR|IM 0.406 .
NF0023550 859 MMRIMER|QF 0.101 .
NF0023550 875 TVTSEAK|MK 0.064 .
NF0023550 877 TSEAKMK|AQ 0.073 .
NF0023550 883 KAQLEFK|PK 0.062 .
NF0023550 885 QLEFKPK|FI 0.099 .
NF0023550 902 SVSFVGR|AL 0.136 .
NF0023550 912 TTPFATK|DS 0.060 .
NF0023550 918 KDSALLR|VV 0.203 .
NF0023550 934 YLHQEVR|ER 0.102 .
NF0023550 936 HQEVRER|GG 0.086 .
NF0023550 958 FTFSSYR|DP 0.092 .
NF0023550 964 RDPNPNR|TI 0.098 .
NF0023550 979 AEWIQMK|DS 0.064 .
NF0023550 985 KDSVTPK|TI 0.086 .
NF0023550 991 KTIQEAK|LQ 0.057 .
NF0023550 1011 HAHAQSK|VV 0.099 .
NF0023550 1021 GIDDELR|QF 0.074 .
NF0023550 1024 DELRQFR|RN 0.152 .
NF0023550 1025 ELRQFRR|NV 0.148 .
NF0023550 1033 VILDATR|NE 0.064 .
NF0023550 1042 IIDTCVK|YL 0.062 .
NF0023550 1060 IGGNFEK|DI 0.083 .
NF0023550 1068 ISNETQR|KW 0.106 .
NF0023550 1069 SNETQRK|WV 0.122 .
NF0023550 1074 RKWVVVR|EE 0.093 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation