NF0025130 | thioredoxin family protein

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_IDPredictionOTHERSPmTPCS_Position
NF0025130OTHER0.9426620.0561550.001183
No Results

  • Fasta :-

    >NF0025130 MTHKVELYVYDLSMGLASAFSQQFTGKHFPGIWHTSIVVYGKEYFFGGGVQCMTPLTTPY GQPVRVIHLGDTQIDQSLFEDFVHTIGQTRFRMDQYNLFENNCNNFTNECSNFLLGVGIP DDILGLPREFFQTPLGQMVKPMIDQMMGGSAHPEQSPNLGAFGGGGMDSGMGGMNNLAQM MNNPLVSQMMNQMMMMNMGGGGYG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0025130.fa Sequence name : NF0025130 Sequence length : 204 VALUES OF COMPUTED PARAMETERS Coef20 : 3.840 CoefTot : -0.352 ChDiff : -8 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.212 1.153 0.084 0.505 MesoH : 0.064 0.164 -0.304 0.274 MuHd_075 : 3.915 3.061 0.410 1.500 MuHd_095 : 20.468 18.357 6.423 4.071 MuHd_100 : 18.370 16.546 6.330 4.015 MuHd_105 : 13.779 11.558 5.242 3.143 Hmax_075 : 14.350 12.250 1.736 4.923 Hmax_095 : 15.400 15.925 2.528 5.022 Hmax_100 : 16.000 16.400 2.622 5.780 Hmax_105 : 15.167 17.383 3.226 5.635 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9421 0.0579 DFMC : 0.9585 0.0415
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 204 NF0025130 MTHKVELYVYDLSMGLASAFSQQFTGKHFPGIWHTSIVVYGKEYFFGGGVQCMTPLTTPYGQPVRVIHLGDTQIDQSLFE 80 DFVHTIGQTRFRMDQYNLFENNCNNFTNECSNFLLGVGIPDDILGLPREFFQTPLGQMVKPMIDQMMGGSAHPEQSPNLG 160 AFGGGGMDSGMGGMNNLAQMMNNPLVSQMMNQMMMMNMGGGGYG 240 ................................................................................ 80 ................................................................................ 160 ............................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0025130 4 ---MTHK|VE 0.055 . NF0025130 27 SQQFTGK|HF 0.085 . NF0025130 42 SIVVYGK|EY 0.070 . NF0025130 65 PYGQPVR|VI 0.089 . NF0025130 90 HTIGQTR|FR 0.098 . NF0025130 92 IGQTRFR|MD 0.096 . NF0025130 128 DILGLPR|EF 0.079 . NF0025130 140 PLGQMVK|PM 0.067 . ____________________________^_________________

  • Fasta :-

    >NF0025130 ATGACCCATAAAGTAGAACTCTATGTCTATGATCTTTCAATGGGACTCGCGTCAGCCTTC TCTCAACAATTCACTGGTAAACACTTTCCTGGCATTTGGCACACCAGTATTGTGGTCTAT GGAAAGGAATACTTCTTTGGTGGAGGTGTTCAATGCATGACTCCACTCACCACACCCTAT GGACAACCTGTCCGTGTCATTCATTTGGGTGATACTCAAATTGATCAGTCACTCTTTGAA GACTTTGTTCATACCATTGGCCAAACTCGATTCCGAATGGATCAATACAATCTCTTTGAG AATAATTGTAATAATTTTACCAATGAATGTTCCAATTTCTTATTGGGTGTGGGTATTCCA GATGATATTCTTGGATTACCACGTGAATTCTTTCAGACACCATTGGGACAAATGGTGAAA CCCATGATTGATCAAATGATGGGTGGAAGTGCACATCCAGAACAATCTCCAAATTTGGGT GCCTTTGGTGGTGGTGGTATGGATAGTGGTATGGGTGGTATGAATAATTTAGCTCAAATG ATGAACAATCCACTCGTTTCACAAATGATGAATCAAATGATGATGATGAATATGGGAGGA GGAGGCTATGGT
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  • Fasta :-

    MTHKVELYVYDLSMGLASAFSQQFTGKHFPGIWHTSIVVYGKEYFFGGGVQCMTPLTTPY GQPVRVIHLGDTQIDQSLFEDFVHTIGQTRFRMDQYNLFENNCNNFTNECSNFLLGVGIP DDILGLPREFFQTPLGQMVKPMIDQMMGGSAHPEQSPNLGAFGGGGMDSGMGGMNNLAQM MNNPLVSQMMNQMMMMNMGGGGYG

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India