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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0026960.fa
Sequence name : NF0026960
Sequence length : 424
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.424
CoefTot : 0.473
ChDiff : 28
ZoneTo : 67
KR : 10
DE : 0
CleavSite : 74
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.976 2.359 0.348 0.774
MesoH : 0.685 0.893 -0.067 0.474
MuHd_075 : 29.184 19.719 7.752 7.021
MuHd_095 : 40.330 32.722 12.576 10.057
MuHd_100 : 48.498 35.695 14.746 11.889
MuHd_105 : 47.914 32.706 14.256 11.268
Hmax_075 : 15.100 15.100 2.614 4.630
Hmax_095 : 17.588 20.738 4.711 5.731
Hmax_100 : 19.500 24.500 5.503 6.730
Hmax_105 : 16.500 20.000 4.402 6.400
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0107 0.9893
DFMC : 0.0098 0.9902
This protein is probably imported in chloroplast.
f(Ser) = 0.2090 f(Arg) = 0.0746 CMi = 1.19760
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
424 NF0026960
MKGLSSSLRIYSKLRNCLQKMLKLVSSSSSFSGISFSRRGGILFHGTTTSTTNTPSMLKVVVMRTIADPPMMDRRRLLDF 80
GINHQFSFFSRMNDLYHHDRKKMIYQSKSNRMMSSLNLMKGVSLDQPESSHHHHHHHLLLNSSYEHPLGGIIGSLYQASS 160
NVLWNMKKQLFKSKFFKNSRTILIPHKLEMSWEELKRKISNVFGGHRYSYYEYSSYGSGGEGSGFRFTNIQKIIALNVAV 240
FVLANLFLTRQDILANLGVSLDNIKHGKIYTMFTSMFTHIDLIHIFMNMYALSQLGKMMPMTRRLLWPAYIFCGLVASSV 320
YLLDKWIGSTALHRPHEYYTTGIGASGAIFGLLAFVTQVHPFIPVGIFFLPIQFKLRNFFYGVIAIECYRWYTNRDSSVS 400
ASGHLGGALGGYLFYLMNRKRLLF 480
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
........................ 480
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0026960 2 -----MK|GL 0.083 .
NF0026960 9 GLSSSLR|IY 0.139 .
NF0026960 13 SLRIYSK|LR 0.064 .
NF0026960 15 RIYSKLR|NC 0.081 .
NF0026960 20 LRNCLQK|ML 0.076 .
NF0026960 23 CLQKMLK|LV 0.070 .
NF0026960 38 SGISFSR|RG 0.097 .
NF0026960 39 GISFSRR|GG 0.163 .
NF0026960 59 NTPSMLK|VV 0.053 .
NF0026960 64 LKVVVMR|TI 0.115 .
NF0026960 74 DPPMMDR|RR 0.061 .
NF0026960 75 PPMMDRR|RL 0.137 .
NF0026960 76 PMMDRRR|LL 0.180 .
NF0026960 91 QFSFFSR|MN 0.118 .
NF0026960 100 DLYHHDR|KK 0.091 .
NF0026960 101 LYHHDRK|KM 0.084 .
NF0026960 102 YHHDRKK|MI 0.147 .
NF0026960 108 KMIYQSK|SN 0.077 .
NF0026960 111 YQSKSNR|MM 0.116 .
NF0026960 120 SSLNLMK|GV 0.087 .
NF0026960 167 NVLWNMK|KQ 0.052 .
NF0026960 168 VLWNMKK|QL 0.102 .
NF0026960 172 MKKQLFK|SK 0.081 .
NF0026960 174 KQLFKSK|FF 0.074 .
NF0026960 177 FKSKFFK|NS 0.090 .
NF0026960 180 KFFKNSR|TI 0.070 .
NF0026960 187 TILIPHK|LE 0.060 .
NF0026960 196 MSWEELK|RK 0.058 .
NF0026960 197 SWEELKR|KI 0.273 .
NF0026960 198 WEELKRK|IS 0.086 .
NF0026960 207 NVFGGHR|YS 0.077 .
NF0026960 226 GEGSGFR|FT 0.097 .
NF0026960 232 RFTNIQK|II 0.057 .
NF0026960 250 ANLFLTR|QD 0.078 .
NF0026960 265 VSLDNIK|HG 0.056 .
NF0026960 268 DNIKHGK|IY 0.070 .
NF0026960 297 ALSQLGK|MM 0.067 .
NF0026960 303 KMMPMTR|RL 0.070 .
NF0026960 304 MMPMTRR|LL 0.122 .
NF0026960 325 SVYLLDK|WI 0.069 .
NF0026960 334 GSTALHR|PH 0.091 .
NF0026960 375 FLPIQFK|LR 0.056 .
NF0026960 377 PIQFKLR|NF 0.104 .
NF0026960 390 IAIECYR|WY 0.076 .
NF0026960 395 YRWYTNR|DS 0.153 .
NF0026960 419 LFYLMNR|KR 0.062 .
NF0026960 420 FYLMNRK|RL 0.060 .
NF0026960 421 YLMNRKR|LL 0.170 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation