Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0032490.fa
Sequence name : NF0032490
Sequence length : 256
VALUES OF COMPUTED PARAMETERS
Coef20 : 2.771
CoefTot : -1.493
ChDiff : -1
ZoneTo : 17
KR : 1
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.565 1.594 0.336 0.555
MesoH : -0.159 0.685 -0.158 0.282
MuHd_075 : 22.875 18.841 5.508 3.407
MuHd_095 : 29.825 17.766 8.738 5.764
MuHd_100 : 28.338 15.481 8.431 5.127
MuHd_105 : 18.788 9.331 6.027 3.276
Hmax_075 : 13.650 11.900 1.144 4.083
Hmax_095 : 12.000 11.200 1.629 4.570
Hmax_100 : 10.400 7.900 0.818 4.260
Hmax_105 : 9.100 5.717 1.107 3.820
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.9753 0.0247
DFMC : 0.9657 0.0343
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
256 NF0032490
MGQIVSQYVFAPPKPTYDEHHPYPVTFLTTKSKKMIPCYYLKASKDTPTTIIYSHGNAADIGAMFDFLVVLRDYLNVNVL 80
HYEYVGYGLANQYQPSESDTYESAEAAYEYLTKAQKVNPKDIVIFGTSVGSGPSCYLANKYPIKGLILECPFVSICRIVS 160
SSVFLRPVDMFCNINRIPNVKAPVIIFHGTNDDVVPYDHGKELYNNVNPRYQYKFVSIENGSHHDIIERLTLKTYIQILR 240
GFLAHLDNPTQEKPSQ 320
................................................................................ 80
................................................................................ 160
................................................................................ 240
................ 320
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0032490 14 YVFAPPK|PT 0.066 .
NF0032490 31 VTFLTTK|SK 0.071 .
NF0032490 33 FLTTKSK|KM 0.060 .
NF0032490 34 LTTKSKK|MI 0.093 .
NF0032490 42 IPCYYLK|AS 0.065 .
NF0032490 45 YYLKASK|DT 0.062 .
NF0032490 72 DFLVVLR|DY 0.080 .
NF0032490 113 AYEYLTK|AQ 0.062 .
NF0032490 116 YLTKAQK|VN 0.055 .
NF0032490 120 AQKVNPK|DI 0.084 .
NF0032490 140 SCYLANK|YP 0.067 .
NF0032490 144 ANKYPIK|GL 0.069 .
NF0032490 157 PFVSICR|IV 0.102 .
NF0032490 166 SSSVFLR|PV 0.200 .
NF0032490 176 MFCNINR|IP 0.082 .
NF0032490 181 NRIPNVK|AP 0.070 .
NF0032490 201 VPYDHGK|EL 0.067 .
NF0032490 210 YNNVNPR|YQ 0.125 .
NF0032490 214 NPRYQYK|FV 0.140 .
NF0032490 229 HHDIIER|LT 0.074 .
NF0032490 233 IERLTLK|TY 0.073 .
NF0032490 240 TYIQILR|GF 0.091 .
NF0032490 253 DNPTQEK|PS 0.061 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation