NF0035530 | probable serine carboxypeptidase cpvl

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004185      

  • Computed_GO_Functions:  serine-type carboxypeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0035530OTHER0.9999140.0000630.000023
No Results

  • Fasta :-

    >NF0035530 MDVYNNMTDYVITNCTGGFNQFDIRNYFDNENDAYIKNVELPHVKQMMHTVGVKYYDSSQ DVWNALYADICQSARYQIEALLDCPTRKIRVLLYNGQYDWLINYMGAAKWIDGMEWHGSK EYLNDEGPGRKPWKIDHQVVGYVHQFDNLIQLVVNGAGHLSPMDQPKNVLEMVKIFTSGR DF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0035530.fa Sequence name : NF0035530 Sequence length : 182 VALUES OF COMPUTED PARAMETERS Coef20 : 3.401 CoefTot : 0.000 ChDiff : -7 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.065 0.794 -0.246 0.381 MesoH : -1.252 -0.181 -0.574 0.115 MuHd_075 : 17.524 15.304 4.384 4.047 MuHd_095 : 30.217 21.999 9.988 5.005 MuHd_100 : 27.446 17.480 8.275 4.686 MuHd_105 : 22.973 10.691 5.357 3.794 Hmax_075 : 13.500 10.200 1.982 4.000 Hmax_095 : 14.200 15.300 3.886 4.740 Hmax_100 : 12.900 10.700 3.325 4.120 Hmax_105 : 7.088 4.025 0.439 3.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8688 0.1312 DFMC : 0.9420 0.0580
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 182 NF0035530 MDVYNNMTDYVITNCTGGFNQFDIRNYFDNENDAYIKNVELPHVKQMMHTVGVKYYDSSQDVWNALYADICQSARYQIEA 80 LLDCPTRKIRVLLYNGQYDWLINYMGAAKWIDGMEWHGSKEYLNDEGPGRKPWKIDHQVVGYVHQFDNLIQLVVNGAGHL 160 SPMDQPKNVLEMVKIFTSGRDF 240 ................................................................................ 80 ................................................................................ 160 ...................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0035530 25 FNQFDIR|NY 0.107 . NF0035530 37 ENDAYIK|NV 0.061 . NF0035530 45 VELPHVK|QM 0.058 . NF0035530 54 MHTVGVK|YY 0.070 . NF0035530 75 DICQSAR|YQ 0.097 . NF0035530 87 LLDCPTR|KI 0.088 . NF0035530 88 LDCPTRK|IR 0.068 . NF0035530 90 CPTRKIR|VL 0.192 . NF0035530 109 NYMGAAK|WI 0.077 . NF0035530 120 MEWHGSK|EY 0.057 . NF0035530 130 NDEGPGR|KP 0.096 . NF0035530 131 DEGPGRK|PW 0.067 . NF0035530 134 PGRKPWK|ID 0.084 . NF0035530 167 SPMDQPK|NV 0.103 . NF0035530 174 NVLEMVK|IF 0.060 . NF0035530 180 KIFTSGR|DF 0.115 . ____________________________^_________________

  • Fasta :-

    >NF0035530 ATGGATGTCTACAACAACATGACAGACTATGTCATTACTAATTGCACAGGAGGATTTAAT CAATTTGATATCCGTAATTATTTTGATAATGAAAATGATGCCTATATCAAAAATGTCGAA CTTCCACATGTGAAACAAATGATGCACACCGTTGGAGTCAAGTATTATGATTCAAGTCAA GATGTTTGGAATGCTTTGTATGCAGATATTTGTCAATCTGCCAGATATCAAATTGAAGCA TTGTTGGATTGTCCAACTCGAAAAATCAGAGTTCTCTTATATAATGGTCAATACGATTGG TTAATTAATTATATGGGAGCAGCAAAATGGATTGATGGAATGGAGTGGCATGGTAGCAAA GAATATTTGAATGATGAAGGTCCTGGAAGAAAACCATGGAAAATCGATCATCAAGTCGTT GGATATGTGCATCAATTCGACAATCTCATTCAATTGGTCGTCAATGGAGCAGGTCACTTG TCACCAATGGATCAACCTAAAAATGTCTTGGAAATGGTCAAAATTTTCACCAGTGGTCGT GACTTTTAA
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  • Fasta :-

    MDVYNNMTDYVITNCTGGFNQFDIRNYFDNENDAYIKNVELPHVKQMMHTVGVKYYDSSQ DVWNALYADICQSARYQIEALLDCPTRKIRVLLYNGQYDWLINYMGAAKWIDGMEWHGSK EYLNDEGPGRKPWKIDHQVVGYVHQFDNLIQLVVNGAGHLSPMDQPKNVLEMVKIFTSGR DF

    No Results
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No Results
IDSitePeptideScoreMethod
NF0035530161 SAGHLSPMDQ0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India