NF0036110 | alpha beta hydrolase

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_IDPredictionOTHERSPmTPCS_Position
NF0036110OTHER0.9986930.0009680.000339
No Results

  • Fasta :-

    >NF0036110 MGSIVSSLTFQPPKPPSYNAEKPYPVTFVEGVKAGKQVALYYLKAKTEDVKATILYSHGN GMDMGMSYDFLTILRDKLNVNVVHYEYFGYGVLQDIEEPSEQGVYECALTAYNYVVHTLN IPPESIIIYGTSMGTAASIYLAAHHRKVAGVVLESPFESIVRTVTNVFAGRLIDIFPNYM RIGAIDAPVFVIHGENDELVPVDHGIYITKHVKNPYPALWIKNAGHNDLREILGLRELTN HLKSKYIRKGKFTSLTLFQNLWWNVMLSKNKSSQSMSS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0036110.fa Sequence name : NF0036110 Sequence length : 278 VALUES OF COMPUTED PARAMETERS Coef20 : 3.406 CoefTot : -1.110 ChDiff : 1 ZoneTo : 20 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.624 1.335 0.270 0.601 MesoH : -0.050 0.689 -0.218 0.319 MuHd_075 : 6.740 9.353 2.271 1.419 MuHd_095 : 16.129 12.845 5.028 4.090 MuHd_100 : 14.136 10.592 4.173 3.876 MuHd_105 : 9.355 7.280 3.130 2.876 Hmax_075 : 7.400 6.533 0.436 2.812 Hmax_095 : 12.700 10.500 1.003 4.600 Hmax_100 : 11.300 9.600 1.098 4.600 Hmax_105 : 10.600 5.600 0.655 3.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9079 0.0921 DFMC : 0.8843 0.1157
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 278 NF0036110 MGSIVSSLTFQPPKPPSYNAEKPYPVTFVEGVKAGKQVALYYLKAKTEDVKATILYSHGNGMDMGMSYDFLTILRDKLNV 80 NVVHYEYFGYGVLQDIEEPSEQGVYECALTAYNYVVHTLNIPPESIIIYGTSMGTAASIYLAAHHRKVAGVVLESPFESI 160 VRTVTNVFAGRLIDIFPNYMRIGAIDAPVFVIHGENDELVPVDHGIYITKHVKNPYPALWIKNAGHNDLREILGLRELTN 240 HLKSKYIRKGKFTSLTLFQNLWWNVMLSKNKSSQSMSS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0036110 14 LTFQPPK|PP 0.061 . NF0036110 22 PSYNAEK|PY 0.061 . NF0036110 33 TFVEGVK|AG 0.058 . NF0036110 36 EGVKAGK|QV 0.064 . NF0036110 44 VALYYLK|AK 0.056 . NF0036110 46 LYYLKAK|TE 0.068 . NF0036110 51 AKTEDVK|AT 0.061 . NF0036110 75 DFLTILR|DK 0.071 . NF0036110 77 LTILRDK|LN 0.059 . NF0036110 146 YLAAHHR|KV 0.131 . NF0036110 147 LAAHHRK|VA 0.182 . NF0036110 162 PFESIVR|TV 0.107 . NF0036110 171 TNVFAGR|LI 0.107 . NF0036110 181 IFPNYMR|IG 0.070 . NF0036110 210 HGIYITK|HV 0.074 . NF0036110 213 YITKHVK|NP 0.061 . NF0036110 222 YPALWIK|NA 0.081 . NF0036110 230 AGHNDLR|EI 0.079 . NF0036110 236 REILGLR|EL 0.078 . NF0036110 243 ELTNHLK|SK 0.069 . NF0036110 245 TNHLKSK|YI 0.139 . NF0036110 248 LKSKYIR|KG 0.084 . NF0036110 249 KSKYIRK|GK 0.120 . NF0036110 251 KYIRKGK|FT 0.207 . NF0036110 269 WNVMLSK|NK 0.065 . NF0036110 271 VMLSKNK|SS 0.066 . ____________________________^_________________

  • Fasta :-

    >NF0036110 ATGGGATCTATCGTTTCATCGCTGACCTTCCAACCACCTAAACCACCAAGTTATAATGCT GAAAAACCGTATCCGGTCACATTTGTTGAAGGAGTGAAAGCCGGAAAACAAGTAGCATTG TATTATTTAAAAGCAAAAACAGAAGATGTGAAAGCAACCATTCTCTATAGTCATGGAAAT GGAATGGATATGGGAATGAGCTATGATTTTCTGACCATACTAAGAGATAAACTCAATGTG AATGTGGTTCATTATGAGTATTTCGGCTATGGAGTTTTGCAAGACATTGAAGAACCATCT GAGCAAGGCGTTTATGAGTGTGCTCTTACTGCCTATAACTATGTCGTTCATACGTTGAAT ATTCCTCCAGAAAGTATAATTATTTATGGAACATCGATGGGAACTGCTGCTTCCATTTAT TTAGCTGCACATCATCGAAAGGTTGCTGGTGTAGTTCTGGAGAGTCCTTTCGAGAGCATT GTAAGAACTGTGACAAATGTATTTGCAGGTCGATTAATTGATATATTCCCCAACTATATG AGAATTGGAGCTATCGATGCACCAGTGTTTGTGATTCATGGAGAGAATGATGAGTTGGTT CCAGTCGATCATGGAATTTATATTACAAAGCATGTGAAAAATCCCTATCCAGCACTTTGG ATTAAGAATGCTGGTCACAATGATTTGAGAGAAATTCTTGGATTGCGAGAATTAACGAAT CACCTTAAGAGTAAGTACATAAGGAAGGGAAAATTCACATCTCTAACTCTTTTCCAGAAT TTATGGTGGAATGTAATGTTATCAAAGAATAAATCATCGCAATCGATGAGCTCATGA
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  • Fasta :-

    MGSIVSSLTFQPPKPPSYNAEKPYPVTFVEGVKAGKQVALYYLKAKTEDVKATILYSHGN GMDMGMSYDFLTILRDKLNVNVVHYEYFGYGVLQDIEEPSEQGVYECALTAYNYVVHTLN IPPESIIIYGTSMGTAASIYLAAHHRKVAGVVLESPFESIVRTVTNVFAGRLIDIFPNYM RIGAIDAPVFVIHGENDELVPVDHGIYITKHVKNPYPALWIKNAGHNDLREILGLRELTN HLKSKYIRKGKFTSLTLFQNLWWNVMLSKNKSSQSMSS

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0036110T90.5920.136NF0036110S30.5620.019NF0036110S60.5200.055
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
NF0036110T90.5920.136NF0036110S30.5620.019NF0036110S60.5200.055
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India