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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/NF0037620.fa
Sequence name : NF0037620
Sequence length : 529
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.586
CoefTot : -0.538
ChDiff : -3
ZoneTo : 36
KR : 7
DE : 0
CleavSite : 20
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.465 0.759 -0.023 0.425
MesoH : -0.882 0.047 -0.519 0.178
MuHd_075 : 25.033 14.157 5.642 6.126
MuHd_095 : 26.910 20.198 9.796 5.932
MuHd_100 : 28.466 21.339 9.511 6.611
MuHd_105 : 36.271 24.215 11.103 8.124
Hmax_075 : 9.450 6.650 1.906 3.232
Hmax_095 : 4.700 8.200 0.629 2.430
Hmax_100 : 6.800 12.800 1.371 3.540
Hmax_105 : 16.333 12.700 3.595 4.153
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0181 0.9819
DFMC : 0.0362 0.9638
This protein is probably imported in mitochondria.
f(Ser) = 0.1667 f(Arg) = 0.0833 CMi = 0.89286
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
529 NF0037620
MKHRFKFFIPSTTTTQSRTSSSFKPCLHFKNSLIRNEQYLTQCNDRKCYSMISIDNIPYTYQVQPSSHAHLMKEDEIAPG 80
FTLEEFKQRHYNLFNLMKENSVLILGSRKEYFMSPNVRYPYKQDSSFYYLSGVSEPDCFLVFKKTGSGNSITLYVREKSK 160
KEFFHGVVNGVQSLQNLWGDYLQVKQVKAFIRDLQSLVKNFNTLYYDPDYDERLSQIIVESGGGIEFFKGPMQKYKIFYP 240
ESLIATLRSIKSKAEIDLTKRCAHISAQAFIELMKQIRPGMSEAHAEAILEFQCKMRGAQRLGYPPVVASGDRANIIHYL 320
TNNHIMEDGDLIRIDGAAEYYGYMNDITRTFPVNGKFTPIQKMLYQVVLDIQKKCINYLKKHLTETITINSFHDYSMYLT 400
QDALAEHFNIGLGYGKNNAESCQLIEEVLYPHMIGHATGMNIHEDVPGRDDKLGPGMIITCEPGIYFSKQVKNYIPNPQL 480
HGLGVQIEDDILLTENGIEILTHETPKEVEEIEHIMSISSKTPSIPFSF 560
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................. 560
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
NF0037620 2 -----MK|HR 0.063 .
NF0037620 4 ---MKHR|FK 0.128 .
NF0037620 6 -MKHRFK|FF 0.081 .
NF0037620 18 TTTTQSR|TS 0.091 .
NF0037620 24 RTSSSFK|PC 0.070 .
NF0037620 30 KPCLHFK|NS 0.064 .
NF0037620 35 FKNSLIR|NE 0.076 .
NF0037620 46 LTQCNDR|KC 0.079 .
NF0037620 47 TQCNDRK|CY 0.087 .
NF0037620 73 SHAHLMK|ED 0.084 .
NF0037620 87 FTLEEFK|QR 0.060 .
NF0037620 89 LEEFKQR|HY 0.094 .
NF0037620 98 NLFNLMK|EN 0.069 .
NF0037620 108 VLILGSR|KE 0.065 .
NF0037620 109 LILGSRK|EY 0.074 .
NF0037620 118 FMSPNVR|YP 0.119 .
NF0037620 122 NVRYPYK|QD 0.069 .
NF0037620 143 DCFLVFK|KT 0.075 .
NF0037620 144 CFLVFKK|TG 0.088 .
NF0037620 156 SITLYVR|EK 0.092 .
NF0037620 158 TLYVREK|SK 0.093 .
NF0037620 160 YVREKSK|KE 0.061 .
NF0037620 161 VREKSKK|EF 0.142 .
NF0037620 185 GDYLQVK|QV 0.083 .
NF0037620 188 LQVKQVK|AF 0.071 .
NF0037620 192 QVKAFIR|DL 0.115 .
NF0037620 199 DLQSLVK|NF 0.057 .
NF0037620 213 DPDYDER|LS 0.077 .
NF0037620 229 GGIEFFK|GP 0.076 .
NF0037620 234 FKGPMQK|YK 0.069 .
NF0037620 236 GPMQKYK|IF 0.079 .
NF0037620 248 SLIATLR|SI 0.119 .
NF0037620 251 ATLRSIK|SK 0.139 .
NF0037620 253 LRSIKSK|AE 0.087 .
NF0037620 260 AEIDLTK|RC 0.060 .
NF0037620 261 EIDLTKR|CA 0.195 .
NF0037620 275 AFIELMK|QI 0.071 .
NF0037620 278 ELMKQIR|PG 0.088 .
NF0037620 295 ILEFQCK|MR 0.083 .
NF0037620 297 EFQCKMR|GA 0.118 .
NF0037620 301 KMRGAQR|LG 0.076 .
NF0037620 313 VVASGDR|AN 0.082 .
NF0037620 333 EDGDLIR|ID 0.104 .
NF0037620 349 YMNDITR|TF 0.080 .
NF0037620 356 TFPVNGK|FT 0.066 .
NF0037620 362 KFTPIQK|ML 0.066 .
NF0037620 373 VVLDIQK|KC 0.054 .
NF0037620 374 VLDIQKK|CI 0.090 .
NF0037620 380 KCINYLK|KH 0.058 .
NF0037620 381 CINYLKK|HL 0.121 .
NF0037620 416 IGLGYGK|NN 0.055 .
NF0037620 449 HEDVPGR|DD 0.112 .
NF0037620 452 VPGRDDK|LG 0.111 .
NF0037620 469 PGIYFSK|QV 0.076 .
NF0037620 472 YFSKQVK|NY 0.068 .
NF0037620 507 LTHETPK|EV 0.123 .
NF0037620 521 IMSISSK|TP 0.073 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation