NF0038980 | thimet oligopeptidase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NF0038980OTHER0.9999530.0000110.000036
No Results

  • Fasta :-

    >NF0038980 MSELYKRNDLVFNLTAEQIEKETTALIEKSKAVHDAVANLPESERTFESVILPIAYDEAY CSIQENNLTFPSYVSPNKEVRDAGSNAEERLSEFTIEVLMREDVYRAVKYVHEKMQKELD KYDEEDKRLVKRILRDYERNGLGLPEEKRSKVKELKNTLSKLCIQFTKNIAEDKTVLTFT KEELSGVPEDVINNYKTSEEDPNKRVVTLKYPDAMPIMKYCKVEETRRKLEIARASQCQE INVPLFEQAVKIRQQIAELMGYKTHADYVLEVNMATPDEVLTFLNNLKEKLIPGGKQELQ TLKEMKGSEVYSWDYLYLLTKLKEEKYNVDDNLIKEYFPLDVTLNGLLSIAQETFSLRFE EVKDTPVWYEDVKLYAVFDKETDAFLGQWYIDSFPREGKYSHFAAFPLSPHFYDEHKKEH YPVSAMVCNFTKPSAETGVSLLKHDEVITLLHEFGHLCHGFLSRTKYARFSGTRVERDFV EMPSQFWENFGWEKEGLKKLSSHYKTKEPLPDDLIEKMIAAKNVGVALFNLRQLFFGIFD MTCHTLSTSEEAEKLNSGELWRKLRREVTLLDAPEGTNGAGSFGHLMGGYDSGYYGYLYS EVFSTDMFSVFKKTGIFNPETGKKLRRVVLERGGSKDGGDMLREFLGREPSQDAFLEDIG LLKR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0038980.fa Sequence name : NF0038980 Sequence length : 664 VALUES OF COMPUTED PARAMETERS Coef20 : 3.713 CoefTot : 0.112 ChDiff : -20 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.865 1.265 -0.070 0.493 MesoH : -0.880 -0.021 -0.500 0.145 MuHd_075 : 32.191 19.193 9.222 5.508 MuHd_095 : 24.432 12.371 6.550 4.225 MuHd_100 : 31.040 13.608 7.457 4.623 MuHd_105 : 29.155 12.668 6.491 4.081 Hmax_075 : 0.817 6.883 -1.054 3.045 Hmax_095 : 10.500 10.300 0.103 3.830 Hmax_100 : 8.200 7.200 -0.550 3.470 Hmax_105 : -3.267 4.100 -2.563 1.108 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9455 0.0545 DFMC : 0.8933 0.1067
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 664 NF0038980 MSELYKRNDLVFNLTAEQIEKETTALIEKSKAVHDAVANLPESERTFESVILPIAYDEAYCSIQENNLTFPSYVSPNKEV 80 RDAGSNAEERLSEFTIEVLMREDVYRAVKYVHEKMQKELDKYDEEDKRLVKRILRDYERNGLGLPEEKRSKVKELKNTLS 160 KLCIQFTKNIAEDKTVLTFTKEELSGVPEDVINNYKTSEEDPNKRVVTLKYPDAMPIMKYCKVEETRRKLEIARASQCQE 240 INVPLFEQAVKIRQQIAELMGYKTHADYVLEVNMATPDEVLTFLNNLKEKLIPGGKQELQTLKEMKGSEVYSWDYLYLLT 320 KLKEEKYNVDDNLIKEYFPLDVTLNGLLSIAQETFSLRFEEVKDTPVWYEDVKLYAVFDKETDAFLGQWYIDSFPREGKY 400 SHFAAFPLSPHFYDEHKKEHYPVSAMVCNFTKPSAETGVSLLKHDEVITLLHEFGHLCHGFLSRTKYARFSGTRVERDFV 480 EMPSQFWENFGWEKEGLKKLSSHYKTKEPLPDDLIEKMIAAKNVGVALFNLRQLFFGIFDMTCHTLSTSEEAEKLNSGEL 560 WRKLRREVTLLDAPEGTNGAGSFGHLMGGYDSGYYGYLYSEVFSTDMFSVFKKTGIFNPETGKKLRRVVLERGGSKDGGD 640 MLREFLGREPSQDAFLEDIGLLKR 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0038980 6 -MSELYK|RN 0.067 . NF0038980 7 MSELYKR|ND 0.115 . NF0038980 21 TAEQIEK|ET 0.065 . NF0038980 29 TTALIEK|SK 0.069 . NF0038980 31 ALIEKSK|AV 0.103 . NF0038980 45 NLPESER|TF 0.079 . NF0038980 78 SYVSPNK|EV 0.084 . NF0038980 81 SPNKEVR|DA 0.237 . NF0038980 90 GSNAEER|LS 0.093 . NF0038980 101 TIEVLMR|ED 0.073 . NF0038980 106 MREDVYR|AV 0.178 . NF0038980 109 DVYRAVK|YV 0.190 . NF0038980 114 VKYVHEK|MQ 0.062 . NF0038980 117 VHEKMQK|EL 0.064 . NF0038980 121 MQKELDK|YD 0.071 . NF0038980 127 KYDEEDK|RL 0.051 . NF0038980 128 YDEEDKR|LV 0.216 . NF0038980 131 EDKRLVK|RI 0.079 . NF0038980 132 DKRLVKR|IL 0.299 . NF0038980 135 LVKRILR|DY 0.283 . NF0038980 139 ILRDYER|NG 0.068 . NF0038980 148 LGLPEEK|RS 0.054 . NF0038980 149 GLPEEKR|SK 0.269 . NF0038980 151 PEEKRSK|VK 0.057 . NF0038980 153 EKRSKVK|EL 0.068 . NF0038980 156 SKVKELK|NT 0.065 . NF0038980 161 LKNTLSK|LC 0.067 . NF0038980 168 LCIQFTK|NI 0.064 . NF0038980 174 KNIAEDK|TV 0.073 . NF0038980 181 TVLTFTK|EE 0.059 . NF0038980 196 DVINNYK|TS 0.057 . NF0038980 204 SEEDPNK|RV 0.062 . NF0038980 205 EEDPNKR|VV 0.168 . NF0038980 210 KRVVTLK|YP 0.088 . NF0038980 219 DAMPIMK|YC 0.067 . NF0038980 222 PIMKYCK|VE 0.061 . NF0038980 227 CKVEETR|RK 0.077 . NF0038980 228 KVEETRR|KL 0.136 . NF0038980 229 VEETRRK|LE 0.069 . NF0038980 234 RKLEIAR|AS 0.102 . NF0038980 251 LFEQAVK|IR 0.061 . NF0038980 253 EQAVKIR|QQ 0.128 . NF0038980 263 AELMGYK|TH 0.055 . NF0038980 288 TFLNNLK|EK 0.054 . NF0038980 290 LNNLKEK|LI 0.075 . NF0038980 296 KLIPGGK|QE 0.059 . NF0038980 303 QELQTLK|EM 0.060 . NF0038980 306 QTLKEMK|GS 0.068 . NF0038980 321 YLYLLTK|LK 0.060 . NF0038980 323 YLLTKLK|EE 0.054 . NF0038980 326 TKLKEEK|YN 0.064 . NF0038980 335 VDDNLIK|EY 0.061 . NF0038980 358 QETFSLR|FE 0.087 . NF0038980 363 LRFEEVK|DT 0.075 . NF0038980 373 VWYEDVK|LY 0.058 . NF0038980 380 LYAVFDK|ET 0.088 . NF0038980 396 YIDSFPR|EG 0.074 . NF0038980 399 SFPREGK|YS 0.134 . NF0038980 417 HFYDEHK|KE 0.059 . NF0038980 418 FYDEHKK|EH 0.092 . NF0038980 432 MVCNFTK|PS 0.065 . NF0038980 443 TGVSLLK|HD 0.063 . NF0038980 464 CHGFLSR|TK 0.088 . NF0038980 466 GFLSRTK|YA 0.066 . NF0038980 469 SRTKYAR|FS 0.157 . NF0038980 474 ARFSGTR|VE 0.083 . NF0038980 477 SGTRVER|DF 0.299 . NF0038980 494 ENFGWEK|EG 0.060 . NF0038980 498 WEKEGLK|KL 0.061 . NF0038980 499 EKEGLKK|LS 0.102 . NF0038980 505 KLSSHYK|TK 0.088 . NF0038980 507 SSHYKTK|EP 0.068 . NF0038980 517 PDDLIEK|MI 0.064 . NF0038980 522 EKMIAAK|NV 0.107 . NF0038980 532 VALFNLR|QL 0.093 . NF0038980 554 TSEEAEK|LN 0.068 . NF0038980 562 NSGELWR|KL 0.089 . NF0038980 563 SGELWRK|LR 0.066 . NF0038980 565 ELWRKLR|RE 0.181 . NF0038980 566 LWRKLRR|EV 0.157 . NF0038980 612 DMFSVFK|KT 0.069 . NF0038980 613 MFSVFKK|TG 0.118 . NF0038980 623 FNPETGK|KL 0.061 . NF0038980 624 NPETGKK|LR 0.087 . NF0038980 626 ETGKKLR|RV 0.112 . NF0038980 627 TGKKLRR|VV 0.188 . NF0038980 632 RRVVLER|GG 0.127 . NF0038980 636 LERGGSK|DG 0.087 . NF0038980 643 DGGDMLR|EF 0.084 . NF0038980 648 LREFLGR|EP 0.101 . NF0038980 663 EDIGLLK|R- 0.057 . NF0038980 664 DIGLLKR|-- 0.130 . ____________________________^_________________

  • Fasta :-

    >NF0038980 ATGTCAGAACTTTACAAGAGAAATGATTTGGTATTTAATTTAACTGCCGAGCAAATTGAG AAGGAAACAACAGCCTTGATCGAGAAATCAAAGGCTGTCCATGATGCAGTTGCCAATCTT CCAGAATCGGAACGAACCTTTGAAAGCGTCATTTTGCCCATTGCCTATGACGAGGCTTAC TGCTCCATTCAGGAGAATAACCTTACCTTCCCAAGTTATGTAAGTCCAAACAAGGAAGTC AGAGATGCTGGATCCAATGCTGAAGAAAGACTCTCTGAATTCACCATTGAAGTTTTGATG CGTGAAGATGTTTACAGAGCTGTAAAATATGTTCATGAAAAGATGCAAAAGGAATTGGAC AAGTACGACGAAGAGGATAAGAGATTGGTGAAAAGAATTTTGAGAGATTATGAACGCAAC GGTTTGGGTCTTCCTGAAGAAAAGAGATCCAAAGTGAAGGAACTCAAGAATACCCTTTCG AAACTTTGTATTCAATTCACAAAGAATATTGCTGAAGATAAGACAGTTCTCACATTCACA AAGGAAGAATTGAGTGGAGTACCAGAAGATGTCATCAACAACTACAAGACCTCTGAAGAG GATCCAAATAAGAGAGTTGTCACACTCAAATATCCTGATGCCATGCCAATCATGAAATAC TGTAAAGTTGAGGAAACTAGACGTAAGCTCGAAATTGCAAGAGCTTCTCAATGTCAGGAA ATTAACGTACCACTTTTCGAGCAAGCTGTTAAAATCAGACAACAAATTGCAGAGCTCATG GGATACAAGACTCACGCAGATTATGTTTTAGAGGTAAACATGGCCACTCCAGACGAGGTT CTCACATTCCTTAACAATCTTAAGGAAAAACTCATCCCTGGAGGAAAACAAGAATTGCAA ACTTTGAAAGAGATGAAAGGTTCAGAAGTCTATTCATGGGACTATCTCTACTTGTTGACC AAGTTGAAGGAAGAGAAATACAATGTTGATGACAACTTGATCAAGGAATATTTCCCTCTT GATGTGACATTGAATGGATTATTGTCCATCGCGCAAGAAACATTCTCTCTTCGTTTCGAA GAGGTCAAAGACACACCTGTGTGGTATGAAGATGTGAAACTGTATGCTGTTTTCGATAAG GAAACCGATGCTTTCTTGGGACAATGGTACATTGATAGCTTCCCACGTGAAGGAAAGTAT TCTCACTTTGCTGCCTTTCCATTGAGTCCTCACTTTTATGATGAACACAAGAAGGAACAC TATCCTGTTTCTGCAATGGTGTGCAATTTCACCAAGCCATCTGCTGAGACTGGTGTCTCG TTGTTAAAACACGATGAGGTGATTACCTTACTTCACGAATTTGGACACTTGTGTCACGGA TTCTTATCGAGAACAAAATATGCACGATTCAGTGGTACCCGTGTAGAGAGAGACTTTGTT GAAATGCCTTCTCAATTCTGGGAGAACTTTGGATGGGAAAAGGAGGGTTTAAAGAAACTC AGCTCTCACTACAAGACAAAGGAGCCATTACCTGATGATTTGATTGAAAAGATGATTGCA GCCAAGAATGTCGGTGTTGCCTTGTTCAATCTTCGCCAATTGTTCTTTGGTATCTTTGAT ATGACTTGTCACACTCTCTCCACTTCAGAAGAAGCTGAAAAATTGAACAGTGGTGAACTC TGGAGAAAATTAAGACGTGAAGTGACCTTATTGGATGCTCCTGAAGGTACCAATGGAGCT GGTAGCTTTGGACACTTGATGGGAGGTTATGACTCTGGATATTATGGTTATTTGTATAGT GAAGTCTTCTCAACGGATATGTTCAGTGTGTTCAAAAAGACTGGAATCTTCAATCCTGAA ACTGGAAAGAAATTGAGACGAGTTGTTTTGGAGAGAGGAGGATCCAAAGATGGTGGAGAC ATGTTGAGAGAATTTTTGGGACGAGAACCTTCACAAGACGCCTTCTTGGAAGATATTGGT TTGTTGAAACGTTAG
  • Download Fasta

  • Fasta :-

    MSELYKRNDLVFNLTAEQIEKETTALIEKSKAVHDAVANLPESERTFESVILPIAYDEAY CSIQENNLTFPSYVSPNKEVRDAGSNAEERLSEFTIEVLMREDVYRAVKYVHEKMQKELD KYDEEDKRLVKRILRDYERNGLGLPEEKRSKVKELKNTLSKLCIQFTKNIAEDKTVLTFT KEELSGVPEDVINNYKTSEEDPNKRVVTLKYPDAMPIMKYCKVEETRRKLEIARASQCQE INVPLFEQAVKIRQQIAELMGYKTHADYVLEVNMATPDEVLTFLNNLKEKLIPGGKQELQ TLKEMKGSEVYSWDYLYLLTKLKEEKYNVDDNLIKEYFPLDVTLNGLLSIAQETFSLRFE EVKDTPVWYEDVKLYAVFDKETDAFLGQWYIDSFPREGKYSHFAAFPLSPHFYDEHKKEH YPVSAMVCNFTKPSAETGVSLLKHDEVITLLHEFGHLCHGFLSRTKYARFSGTRVERDFV EMPSQFWENFGWEKEGLKKLSSHYKTKEPLPDDLIEKMIAAKNVGVALFNLRQLFFGIFD MTCHTLSTSEEAEKLNSGELWRKLRREVTLLDAPEGTNGAGSFGHLMGGYDSGYYGYLYS EVFSTDMFSVFKKTGIFNPETGKKLRRVVLERGGSKDGGDMLREFLGREPSQDAFLEDIG LLKR

  • title: Zn binding site
  • coordinates: H452,H456,E481
No Results
No Results
IDSitePeptideScoreMethod
NF0038980471 SYARFSGTRV0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India