• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

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_ID
Prediction
OTHER
SP
mTP
CS_Position
NF0039810 OTHER 0.999952 0.000023 0.000025
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >NF0039810 MSHHHHHNDAKDLDPHAARLAAQRSSIDYTDFPAFPTKVVVHPLVLLSVVDHYNRVAKDT NNRVAGVLLGEISKDGVVDCTNSFAVPFEEDPKDPSIWFFDHSFLENMLGMFRKVTAKEK VVGWYSTGPKIRKSDIEIHQIIKEKYLPHPTYCIIDVNPEQENVIPTDAYVAVEEREDQQ SQPKLTFTHLPSEIGAYEAEEIGVEHLLRDVKDTTISDLASAVSTRMTSLKALRNRLSEI NTYLDQVVSGKMPVNHNILYLLQDVFNLLPGLHTNDAKQSIGKKTNDTYLAMYLSSVIRC IISLHDLINNKIEMREFEAKQLDKKKEEKKEEKKEESSNDKEKESQKTSTDKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0039810.fa Sequence name : NF0039810 Sequence length : 353 VALUES OF COMPUTED PARAMETERS Coef20 : 2.695 CoefTot : -1.217 ChDiff : -10 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.112 1.729 0.221 0.578 MesoH : -0.860 0.195 -0.479 0.165 MuHd_075 : 3.949 4.285 2.034 1.110 MuHd_095 : 14.170 13.414 5.544 3.373 MuHd_100 : 11.227 9.892 4.088 2.629 MuHd_105 : 10.514 8.298 2.747 2.398 Hmax_075 : -11.667 -5.950 -6.677 -0.140 Hmax_095 : -4.550 -1.225 -4.704 0.963 Hmax_100 : -8.600 -3.300 -5.643 0.460 Hmax_105 : -3.500 -2.567 -6.312 1.330 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9980 0.0020 DFMC : 0.9980 0.0020
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 353 NF0039810 MSHHHHHNDAKDLDPHAARLAAQRSSIDYTDFPAFPTKVVVHPLVLLSVVDHYNRVAKDTNNRVAGVLLGEISKDGVVDC 80 TNSFAVPFEEDPKDPSIWFFDHSFLENMLGMFRKVTAKEKVVGWYSTGPKIRKSDIEIHQIIKEKYLPHPTYCIIDVNPE 160 QENVIPTDAYVAVEEREDQQSQPKLTFTHLPSEIGAYEAEEIGVEHLLRDVKDTTISDLASAVSTRMTSLKALRNRLSEI 240 NTYLDQVVSGKMPVNHNILYLLQDVFNLLPGLHTNDAKQSIGKKTNDTYLAMYLSSVIRCIISLHDLINNKIEMREFEAK 320 QLDKKKEEKKEEKKEESSNDKEKESQKTSTDKK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NF0039810 11 HHHNDAK|DL 0.104 . NF0039810 19 LDPHAAR|LA 0.084 . NF0039810 24 ARLAAQR|SS 0.155 . NF0039810 38 FPAFPTK|VV 0.075 . NF0039810 55 VVDHYNR|VA 0.075 . NF0039810 58 HYNRVAK|DT 0.245 . NF0039810 63 AKDTNNR|VA 0.102 . NF0039810 74 LLGEISK|DG 0.059 . NF0039810 93 PFEEDPK|DP 0.068 . NF0039810 113 NMLGMFR|KV 0.109 . NF0039810 114 MLGMFRK|VT 0.100 . NF0039810 118 FRKVTAK|EK 0.074 . NF0039810 120 KVTAKEK|VV 0.080 . NF0039810 130 WYSTGPK|IR 0.060 . NF0039810 132 STGPKIR|KS 0.153 . NF0039810 133 TGPKIRK|SD 0.114 . NF0039810 143 EIHQIIK|EK 0.056 . NF0039810 145 HQIIKEK|YL 0.069 . NF0039810 176 YVAVEER|ED 0.096 . NF0039810 184 DQQSQPK|LT 0.078 . NF0039810 209 GVEHLLR|DV 0.151 . NF0039810 212 HLLRDVK|DT 0.130 . NF0039810 226 ASAVSTR|MT 0.111 . NF0039810 231 TRMTSLK|AL 0.084 . NF0039810 234 TSLKALR|NR 0.076 . NF0039810 236 LKALRNR|LS 0.095 . NF0039810 251 DQVVSGK|MP 0.059 . NF0039810 278 LHTNDAK|QS 0.065 . NF0039810 283 AKQSIGK|KT 0.067 . NF0039810 284 KQSIGKK|TN 0.150 . NF0039810 299 YLSSVIR|CI 0.101 . NF0039810 311 HDLINNK|IE 0.057 . NF0039810 315 NNKIEMR|EF 0.106 . NF0039810 320 MREFEAK|QL 0.091 . NF0039810 324 EAKQLDK|KK 0.062 . NF0039810 325 AKQLDKK|KE 0.103 . NF0039810 326 KQLDKKK|EE 0.112 . NF0039810 329 DKKKEEK|KE 0.076 . NF0039810 330 KKKEEKK|EE 0.115 . NF0039810 333 EEKKEEK|KE 0.062 . NF0039810 334 EKKEEKK|EE 0.087 . NF0039810 341 EESSNDK|EK 0.070 . NF0039810 343 SSNDKEK|ES 0.076 . NF0039810 347 KEKESQK|TS 0.065 . NF0039810 352 QKTSTDK|K- 0.065 . NF0039810 353 KTSTDKK|-- 0.130 . ____________________________^_________________
  • Fasta :-

    >NF0039810 ATGAGCCATCATCATCATCACAACGACGCCAAAGATTTAGATCCTCATGCAGCAAGGCTT GCAGCACAGCGCTCCAGTATTGATTACACGGATTTTCCGGCCTTTCCAACCAAGGTGGTG GTGCATCCATTGGTGTTGTTGAGTGTTGTGGATCACTATAATCGGGTTGCGAAAGATACT AATAATAGAGTCGCTGGAGTTTTGTTGGGAGAGATTTCAAAGGATGGTGTGGTGGATTGT ACAAATAGTTTTGCTGTGCCTTTTGAGGAAGATCCTAAAGATCCAAGTATTTGGTTCTTT GATCATAGTTTCCTTGAGAATATGTTGGGAATGTTTAGAAAGGTAACAGCCAAGGAAAAG GTGGTCGGATGGTACAGTACTGGACCAAAAATCAGAAAATCCGATATCGAGATTCATCAA ATTATCAAGGAGAAATACCTTCCTCATCCAACCTATTGTATTATTGATGTAAATCCAGAA CAAGAAAATGTAATACCTACTGATGCCTATGTTGCAGTGGAAGAACGTGAAGATCAACAA TCTCAACCAAAGCTCACATTTACTCATTTACCATCTGAAATTGGAGCTTATGAGGCCGAA GAAATTGGTGTCGAACATTTACTTCGTGATGTTAAAGACACAACTATTTCTGATTTGGCT TCAGCAGTGTCAACTCGTATGACAAGCTTAAAGGCACTGAGAAACAGATTGAGCGAGATC AATACTTATCTTGATCAGGTTGTTTCAGGCAAAATGCCAGTCAATCACAACATTTTATAT TTATTACAAGACGTCTTCAATTTACTTCCTGGTTTGCACACGAACGATGCCAAACAATCC ATTGGAAAAAAGACAAATGATACTTATTTGGCCATGTATTTGAGCTCTGTAATTCGCTGT ATCATTTCATTGCATGATTTGATCAATAACAAGATTGAAATGAGAGAATTTGAAGCAAAA CAGCTCGATAAAAAGAAGGAAGAGAAGAAAGAAGAGAAGAAGGAAGAATCCTCTAACGAC AAGGAAAAGGAATCACAAAAAACTTCCACAGACAAAAAGTAA
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  • Fasta :-

    MSHHHHHNDAKDLDPHAARLAAQRSSIDYTDFPAFPTKVVVHPLVLLSVVDHYNRVAKDT NNRVAGVLLGEISKDGVVDCTNSFAVPFEEDPKDPSIWFFDHSFLENMLGMFRKVTAKEK VVGWYSTGPKIRKSDIEIHQIIKEKYLPHPTYCIIDVNPEQENVIPTDAYVAVEEREDQQ SQPKLTFTHLPSEIGAYEAEEIGVEHLLRDVKDTTISDLASAVSTRMTSLKALRNRLSEI NTYLDQVVSGKMPVNHNILYLLQDVFNLLPGLHTNDAKQSIGKKTNDTYLAMYLSSVIRC IISLHDLINNKIEMREFEAKQLDKKKEEKKEEKKEESSNDKEKESQKTSTDKK

    No Results
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ID
Site
Position
Gscore
Iscore
NF0039810 T 350 0.551 0.052
Showing 1 to 1 of 1 rows
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ID
Site
Position
Gscore
Iscore
NF0039810 T 350 0.551 0.052
Showing 1 to 1 of 1 rows
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ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
NF0039810 337 S KKEESSNDK 0.994 unsp NF0039810 337 S KKEESSNDK 0.994 unsp NF0039810 337 S KKEESSNDK 0.994 unsp NF0039810 345 S KEKESQKTS 0.994 unsp NF0039810 134 S KIRKSDIEI 0.997 unsp NF0039810 229 S TRMTSLKAL 0.996 unsp
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India