NF0041990 | phospholipase a-2-activating

UniProt_ID:

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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NF0041990	OTHER	0.943526	0.026090	0.030384

No Results

Fasta :-
>NF0041990 MKAYQTRLQLSLIRIKRLIEQGIPIQIIYRSRQGLFFCILTYFTSTLSYLTCRYNQPNSA NHDYSLCCPGNLPITIADGLPHTCKLLIQNNNKLTLILDDKYLFLKDFVVDFQRVFGNGK KFKISFTGATGGLSEEHTILAWTVSFKSQKANGEQISTNLPPLESYILFEEGNLTGIEKK FREFCALESTSISEQQIQSLLNMSSWKMVDCSLIVNIIKQWKFDHLFPVIDLLRLAVVSN KWVAQTFSKLFIQNQKDHLLLNVLDRLKEANETNSSYSYCLLTLRLLNNMFTEKLSRVYV NKFSETILDQLCENKHFSAHLQNKAYIRNVWITTFFNLSLLFTKEFPSEEMTVRLFNIVF EFLENECKREDTDESCCVMALNAMVVLLKITSKEDSLNEDSMLHGLALSMDLVTLLSRQL ATKFCDTQQHAPLHALIHSIIRHLDL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NF0041990.fa Sequence name : NF0041990 Sequence length : 446 VALUES OF COMPUTED PARAMETERS Coef20 : 4.649 CoefTot : -3.012 ChDiff : 1 ZoneTo : 98 KR : 10 DE : 3 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.882 1.882 0.376 0.599 MesoH : -0.368 0.416 -0.252 0.201 MuHd_075 : 37.959 27.538 11.825 9.974 MuHd_095 : 36.947 26.199 13.022 7.489 MuHd_100 : 36.763 26.171 12.741 9.414 MuHd_105 : 42.914 23.850 10.612 10.119 Hmax_075 : 13.417 14.467 3.555 6.977 Hmax_095 : 9.800 12.688 2.698 4.322 Hmax_100 : 16.500 17.400 3.273 6.700 Hmax_105 : 18.200 23.333 3.426 7.677 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9341 0.0659 DFMC : 0.8374 0.1626

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 446 NF0041990 MKAYQTRLQLSLIRIKRLIEQGIPIQIIYRSRQGLFFCILTYFTSTLSYLTCRYNQPNSANHDYSLCCPGNLPITIADGL 80 PHTCKLLIQNNNKLTLILDDKYLFLKDFVVDFQRVFGNGKKFKISFTGATGGLSEEHTILAWTVSFKSQKANGEQISTNL 160 PPLESYILFEEGNLTGIEKKFREFCALESTSISEQQIQSLLNMSSWKMVDCSLIVNIIKQWKFDHLFPVIDLLRLAVVSN 240 KWVAQTFSKLFIQNQKDHLLLNVLDRLKEANETNSSYSYCLLTLRLLNNMFTEKLSRVYVNKFSETILDQLCENKHFSAH 320 LQNKAYIRNVWITTFFNLSLLFTKEFPSEEMTVRLFNIVFEFLENECKREDTDESCCVMALNAMVVLLKITSKEDSLNED 400 SMLHGLALSMDLVTLLSRQLATKFCDTQQHAPLHALIHSIIRHLDL 480 ................P............................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NF0041990 2 -----MK|AY 0.068 . NF0041990 7 MKAYQTR|LQ 0.084 . NF0041990 14 LQLSLIR|IK 0.080 . NF0041990 16 LSLIRIK|RL 0.060 . NF0041990 17 SLIRIKR|LI 0.736 *ProP* NF0041990 30 PIQIIYR|SR 0.103 . NF0041990 32 QIIYRSR|QG 0.065 . NF0041990 53 LSYLTCR|YN 0.090 . NF0041990 85 GLPHTCK|LL 0.066 . NF0041990 93 LIQNNNK|LT 0.058 . NF0041990 101 TLILDDK|YL 0.065 . NF0041990 106 DKYLFLK|DF 0.062 . NF0041990 114 FVVDFQR|VF 0.088 . NF0041990 120 RVFGNGK|KF 0.060 . NF0041990 121 VFGNGKK|FK 0.083 . NF0041990 123 GNGKKFK|IS 0.096 . NF0041990 147 AWTVSFK|SQ 0.090 . NF0041990 150 VSFKSQK|AN 0.090 . NF0041990 179 NLTGIEK|KF 0.055 . NF0041990 180 LTGIEKK|FR 0.098 . NF0041990 182 GIEKKFR|EF 0.136 . NF0041990 207 LNMSSWK|MV 0.109 . NF0041990 219 LIVNIIK|QW 0.056 . NF0041990 222 NIIKQWK|FD 0.063 . NF0041990 234 PVIDLLR|LA 0.076 . NF0041990 241 LAVVSNK|WV 0.079 . NF0041990 249 VAQTFSK|LF 0.068 . NF0041990 256 LFIQNQK|DH 0.054 . NF0041990 266 LLNVLDR|LK 0.131 . NF0041990 268 NVLDRLK|EA 0.058 . NF0041990 285 YCLLTLR|LL 0.068 . NF0041990 294 NNMFTEK|LS 0.061 . NF0041990 297 FTEKLSR|VY 0.069 . NF0041990 302 SRVYVNK|FS 0.120 . NF0041990 315 DQLCENK|HF 0.069 . NF0041990 324 SAHLQNK|AY 0.076 . NF0041990 328 QNKAYIR|NV 0.115 . NF0041990 344 LSLLFTK|EF 0.066 . NF0041990 354 SEEMTVR|LF 0.090 . NF0041990 368 FLENECK|RE 0.059 . NF0041990 369 LENECKR|ED 0.180 . NF0041990 389 AMVVLLK|IT 0.065 . NF0041990 393 LLKITSK|ED 0.072 . NF0041990 418 LVTLLSR|QL 0.082 . NF0041990 423 SRQLATK|FC 0.103 . NF0041990 442 LIHSIIR|HL 0.093 . ____________________________^_________________

Fasta :-
>NF0041990 ATGAAGGCATACCAAACTCGATTGCAATTGAGTTTGATACGTATCAAACGGTTGATAGAA CAAGGGATCCCAATTCAAATCATATATCGATCCAGACAAGGTTTGTTTTTTTGTATTTTA ACATACTTTACATCTACCTTGTCATATTTAACATGTAGATATAATCAACCGAATTCAGCT AACCACGACTATTCATTATGCTGCCCAGGCAATCTCCCTATAACGATTGCTGATGGCTTA CCCCACACATGTAAACTATTAATTCAAAACAACAACAAGCTTACTCTCATCTTAGACGAC AAGTATTTGTTTCTTAAGGACTTTGTTGTCGATTTTCAACGAGTATTCGGCAATGGTAAA AAATTCAAAATTTCATTCACAGGTGCAACTGGAGGTCTGTCTGAAGAACATACCATTTTA GCCTGGACTGTTTCTTTCAAGTCGCAAAAAGCTAATGGAGAACAAATAAGTACTAACCTT CCGCCTCTGGAGAGTTATATTCTTTTTGAAGAAGGTAATTTGACAGGAATTGAAAAGAAA TTTAGAGAGTTTTGTGCACTTGAATCAACTTCTATTTCAGAGCAACAAATTCAAAGTTTG TTGAATATGTCGTCTTGGAAAATGGTTGATTGTAGTTTGATTGTTAATATCATCAAACAA TGGAAATTTGATCATCTGTTTCCTGTGATTGATTTATTAAGATTAGCTGTTGTCAGTAAC AAATGGGTTGCTCAAACATTTAGCAAGTTGTTTATTCAAAATCAAAAAGATCATTTGCTT TTAAATGTTCTCGATAGGCTTAAGGAAGCGAATGAAACGAATTCTAGCTATTCATACTGC CTTTTGACTCTTCGACTATTGAACAACATGTTTACGGAGAAATTGAGCAGGGTATATGTG AACAAATTCTCAGAAACCATTCTGGATCAGCTTTGTGAAAACAAACACTTTTCTGCTCAT CTCCAAAACAAAGCCTATATAAGGAATGTTTGGATCACCACTTTCTTTAACTTGTCTTTA TTATTCACAAAAGAATTTCCATCTGAAGAAATGACGGTTAGACTTTTCAACATTGTATTT GAATTCTTAGAAAATGAATGCAAGAGAGAAGATACAGACGAATCATGTTGTGTGATGGCG TTGAATGCCATGGTGGTACTTTTAAAAATTACCTCAAAAGAAGATTCACTCAATGAAGAC AGCATGCTTCATGGTTTGGCTTTGAGCATGGACTTGGTCACGCTCCTCTCTCGACAACTT GCCACAAAATTTTGTGACACTCAACAACATGCCCCACTTCATGCTTTGATTCACTCGATC ATTCGCCACTTGGATCTTTGA
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Fasta :-

MKAYQTRLQLSLIRIKRLIEQGIPIQIIYRSRQGLFFCILTYFTSTLSYLTCRYNQPNSA NHDYSLCCPGNLPITIADGLPHTCKLLIQNNNKLTLILDDKYLFLKDFVVDFQRVFGNGK KFKISFTGATGGLSEEHTILAWTVSFKSQKANGEQISTNLPPLESYILFEEGNLTGIEKK FREFCALESTSISEQQIQSLLNMSSWKMVDCSLIVNIIKQWKFDHLFPVIDLLRLAVVSN KWVAQTFSKLFIQNQKDHLLLNVLDRLKEANETNSSYSYCLLTLRLLNNMFTEKLSRVYV NKFSETILDQLCENKHFSAHLQNKAYIRNVWITTFFNLSLLFTKEFPSEEMTVRLFNIVF EFLENECKREDTDESCCVMALNAMVVLLKITSKEDSLNEDSMLHGLALSMDLVTLLSRQL ATKFCDTQQHAPLHALIHSIIRHLDL

SCOPe

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NF0041990	392 S	LKITSKEDS	0.994	unsp	NF0041990	392 S	LKITSKEDS	0.994	unsp	NF0041990	392 S	LKITSKEDS	0.994	unsp	NF0041990	396 S	SKEDSLNED	0.994	unsp	NF0041990	148 S	VSFKSQKAN	0.993	unsp	NF0041990	348 S	KEFPSEEMT	0.995	unsp

NF0041990 | phospholipase a-2-activating

ID's

UniProt_ID:

GEO Functions

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

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Domains

SCOPe

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India